Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y6S:B3:A20
Extra
PDB:
ATOM 1 O3' U A 2 44.284 10.282 31.367 1.00 44.12 O
ATOM 2 P G A 3 45.583 9.902 30.502 1.00 45.44 P
ATOM 3 OP1 G A 3 46.686 9.521 31.425 1.00 45.38 O
ATOM 4 OP2 G A 3 45.792 10.994 29.516 1.00 45.40 O
ATOM 5 O5' G A 3 45.141 8.601 29.700 1.00 43.51 O
ATOM 6 C5' G A 3 44.916 7.359 30.381 1.00 41.74 C
ATOM 7 C4' G A 3 44.460 6.307 29.401 1.00 41.29 C
ATOM 8 O4' G A 3 43.229 6.751 28.773 1.00 39.97 O
ATOM 9 C3' G A 3 45.395 6.042 28.232 1.00 40.05 C
ATOM 10 O3' G A 3 46.426 5.132 28.603 1.00 42.23 O
ATOM 11 C2' G A 3 44.445 5.454 27.198 1.00 39.19 C
ATOM 12 O2' G A 3 44.132 4.105 27.460 1.00 40.68 O
ATOM 13 C1' G A 3 43.189 6.295 27.433 1.00 38.38 C
ATOM 14 N9 G A 3 43.107 7.459 26.561 1.00 36.27 N
ATOM 15 C8 G A 3 43.447 8.751 26.870 1.00 35.31 C
ATOM 16 N7 G A 3 43.279 9.575 25.873 1.00 35.01 N
ATOM 17 C5 G A 3 42.794 8.779 24.848 1.00 35.51 C
ATOM 18 C6 G A 3 42.438 9.111 23.517 1.00 36.00 C
ATOM 19 O6 G A 3 42.479 10.211 22.962 1.00 35.99 O
ATOM 20 N1 G A 3 42.001 7.998 22.813 1.00 37.04 N
ATOM 21 C2 G A 3 41.918 6.726 23.323 1.00 37.99 C
ATOM 22 N2 G A 3 41.466 5.788 22.487 1.00 39.96 N
ATOM 23 N3 G A 3 42.250 6.400 24.561 1.00 36.36 N
ATOM 24 C4 G A 3 42.678 7.470 25.261 1.00 36.29 C
ATOM 25 P C A 4 47.793 5.072 27.754 1.00 43.92 P
ATOM 26 OP1 C A 4 48.728 4.139 28.433 1.00 42.27 O
ATOM 27 OP2 C A 4 48.221 6.465 27.478 1.00 44.51 O
ATOM 28 O5' C A 4 47.352 4.414 26.375 1.00 42.26 O
TER
ATOM 1 O3' C B 19 36.696 4.513 16.710 1.00 42.71 O
ATOM 2 P A B 20 35.409 4.915 17.577 1.00 42.45 P
ATOM 3 OP1 A B 20 34.306 3.989 17.204 1.00 45.31 O
ATOM 4 OP2 A B 20 35.222 6.381 17.433 1.00 41.59 O
ATOM 5 O5' A B 20 35.845 4.602 19.075 1.00 40.80 O
ATOM 6 C5' A B 20 36.081 3.252 19.506 1.00 39.89 C
ATOM 7 C4' A B 20 36.342 3.221 20.992 1.00 40.76 C
ATOM 8 O4' A B 20 37.601 3.885 21.276 1.00 42.20 O
ATOM 9 C3' A B 20 35.327 3.971 21.835 1.00 41.29 C
ATOM 10 O3' A B 20 34.180 3.167 22.087 1.00 41.96 O
ATOM 11 C2' A B 20 36.126 4.284 23.091 1.00 41.25 C
ATOM 12 O2' A B 20 36.253 3.163 23.939 1.00 44.02 O
ATOM 13 C1' A B 20 37.503 4.592 22.500 1.00 40.37 C
ATOM 14 N9 A B 20 37.718 6.013 22.225 1.00 37.92 N
ATOM 15 C8 A B 20 37.400 6.707 21.086 1.00 37.76 C
ATOM 16 N7 A B 20 37.709 7.980 21.138 1.00 37.41 N
ATOM 17 C5 A B 20 38.268 8.134 22.398 1.00 36.33 C
ATOM 18 C6 A B 20 38.784 9.253 23.071 1.00 36.37 C
ATOM 19 N6 A B 20 38.819 10.479 22.552 1.00 35.54 N
ATOM 20 N1 A B 20 39.264 9.069 24.318 1.00 37.96 N
ATOM 21 C2 A B 20 39.215 7.840 24.846 1.00 39.18 C
ATOM 22 N3 A B 20 38.751 6.713 24.315 1.00 37.19 N
ATOM 23 C4 A B 20 38.285 6.931 23.076 1.00 36.42 C
ATOM 24 P A B 21 32.844 3.837 22.674 1.00 43.98 P
ATOM 25 OP1 A B 21 31.822 2.770 22.761 1.00 44.27 O
ATOM 26 OP2 A B 21 32.538 5.076 21.912 1.00 43.50 O
ATOM 27 O5' A B 21 33.251 4.246 24.155 1.00 41.36 O
TER
ATOM 2 P G A 3 45.583 9.902 30.502 1.00 45.44 P
ATOM 3 OP1 G A 3 46.686 9.521 31.425 1.00 45.38 O
ATOM 4 OP2 G A 3 45.792 10.994 29.516 1.00 45.40 O
ATOM 5 O5' G A 3 45.141 8.601 29.700 1.00 43.51 O
ATOM 6 C5' G A 3 44.916 7.359 30.381 1.00 41.74 C
ATOM 7 C4' G A 3 44.460 6.307 29.401 1.00 41.29 C
ATOM 8 O4' G A 3 43.229 6.751 28.773 1.00 39.97 O
ATOM 9 C3' G A 3 45.395 6.042 28.232 1.00 40.05 C
ATOM 10 O3' G A 3 46.426 5.132 28.603 1.00 42.23 O
ATOM 11 C2' G A 3 44.445 5.454 27.198 1.00 39.19 C
ATOM 12 O2' G A 3 44.132 4.105 27.460 1.00 40.68 O
ATOM 13 C1' G A 3 43.189 6.295 27.433 1.00 38.38 C
ATOM 14 N9 G A 3 43.107 7.459 26.561 1.00 36.27 N
ATOM 15 C8 G A 3 43.447 8.751 26.870 1.00 35.31 C
ATOM 16 N7 G A 3 43.279 9.575 25.873 1.00 35.01 N
ATOM 17 C5 G A 3 42.794 8.779 24.848 1.00 35.51 C
ATOM 18 C6 G A 3 42.438 9.111 23.517 1.00 36.00 C
ATOM 19 O6 G A 3 42.479 10.211 22.962 1.00 35.99 O
ATOM 20 N1 G A 3 42.001 7.998 22.813 1.00 37.04 N
ATOM 21 C2 G A 3 41.918 6.726 23.323 1.00 37.99 C
ATOM 22 N2 G A 3 41.466 5.788 22.487 1.00 39.96 N
ATOM 23 N3 G A 3 42.250 6.400 24.561 1.00 36.36 N
ATOM 24 C4 G A 3 42.678 7.470 25.261 1.00 36.29 C
ATOM 25 P C A 4 47.793 5.072 27.754 1.00 43.92 P
ATOM 26 OP1 C A 4 48.728 4.139 28.433 1.00 42.27 O
ATOM 27 OP2 C A 4 48.221 6.465 27.478 1.00 44.51 O
ATOM 28 O5' C A 4 47.352 4.414 26.375 1.00 42.26 O
TER
ATOM 1 O3' C B 19 36.696 4.513 16.710 1.00 42.71 O
ATOM 2 P A B 20 35.409 4.915 17.577 1.00 42.45 P
ATOM 3 OP1 A B 20 34.306 3.989 17.204 1.00 45.31 O
ATOM 4 OP2 A B 20 35.222 6.381 17.433 1.00 41.59 O
ATOM 5 O5' A B 20 35.845 4.602 19.075 1.00 40.80 O
ATOM 6 C5' A B 20 36.081 3.252 19.506 1.00 39.89 C
ATOM 7 C4' A B 20 36.342 3.221 20.992 1.00 40.76 C
ATOM 8 O4' A B 20 37.601 3.885 21.276 1.00 42.20 O
ATOM 9 C3' A B 20 35.327 3.971 21.835 1.00 41.29 C
ATOM 10 O3' A B 20 34.180 3.167 22.087 1.00 41.96 O
ATOM 11 C2' A B 20 36.126 4.284 23.091 1.00 41.25 C
ATOM 12 O2' A B 20 36.253 3.163 23.939 1.00 44.02 O
ATOM 13 C1' A B 20 37.503 4.592 22.500 1.00 40.37 C
ATOM 14 N9 A B 20 37.718 6.013 22.225 1.00 37.92 N
ATOM 15 C8 A B 20 37.400 6.707 21.086 1.00 37.76 C
ATOM 16 N7 A B 20 37.709 7.980 21.138 1.00 37.41 N
ATOM 17 C5 A B 20 38.268 8.134 22.398 1.00 36.33 C
ATOM 18 C6 A B 20 38.784 9.253 23.071 1.00 36.37 C
ATOM 19 N6 A B 20 38.819 10.479 22.552 1.00 35.54 N
ATOM 20 N1 A B 20 39.264 9.069 24.318 1.00 37.96 N
ATOM 21 C2 A B 20 39.215 7.840 24.846 1.00 39.18 C
ATOM 22 N3 A B 20 38.751 6.713 24.315 1.00 37.19 N
ATOM 23 C4 A B 20 38.285 6.931 23.076 1.00 36.42 C
ATOM 24 P A B 21 32.844 3.837 22.674 1.00 43.98 P
ATOM 25 OP1 A B 21 31.822 2.770 22.761 1.00 44.27 O
ATOM 26 OP2 A B 21 32.538 5.076 21.912 1.00 43.50 O
ATOM 27 O5' A B 21 33.251 4.246 24.155 1.00 41.36 O
TER
Atoms:
OP1: (46.686,9.521,31.425)
OP2: (45.792,10.994,29.516)
C3': (45.395,6.042,28.232)
C1': (43.189,6.295,27.433)
C5': (44.916,7.359,30.381)
O6: (42.479,10.211,22.962)
O4': (43.229,6.751,28.773)
C8: (43.447,8.751,26.870)
C2: (41.918,6.726,23.323)
C6: (42.438,9.111,23.517)
C5: (42.794,8.779,24.848)
C4: (42.678,7.470,25.261)
P: (45.583,9.902,30.502)
C4': (44.460,6.307,29.401)
C2': (44.445,5.454,27.198)
O2': (44.132,4.105,27.460)
N1: (42.001,7.998,22.813)
N2: (41.466,5.788,22.487)
N3: (42.250,6.400,24.561)
N7: (43.279,9.575,25.873)
N9: (43.107,7.459,26.561)
O5': (45.141,8.601,29.700)
O3': (46.426,5.132,28.603)
OP2: (45.792,10.994,29.516)
C3': (45.395,6.042,28.232)
C1': (43.189,6.295,27.433)
C5': (44.916,7.359,30.381)
O6: (42.479,10.211,22.962)
O4': (43.229,6.751,28.773)
C8: (43.447,8.751,26.870)
C2: (41.918,6.726,23.323)
C6: (42.438,9.111,23.517)
C5: (42.794,8.779,24.848)
C4: (42.678,7.470,25.261)
P: (45.583,9.902,30.502)
C4': (44.460,6.307,29.401)
C2': (44.445,5.454,27.198)
O2': (44.132,4.105,27.460)
N1: (42.001,7.998,22.813)
N2: (41.466,5.788,22.487)
N3: (42.250,6.400,24.561)
N7: (43.279,9.575,25.873)
N9: (43.107,7.459,26.561)
O5': (45.141,8.601,29.700)
O3': (46.426,5.132,28.603)
OP1: (34.306,3.989,17.204)
OP2: (35.222,6.381,17.433)
C3': (35.327,3.971,21.835)
C1': (37.503,4.592,22.500)
C5': (36.081,3.252,19.506)
O4': (37.601,3.885,21.276)
C8: (37.400,6.707,21.086)
O2': (36.253,3.163,23.939)
C6: (38.784,9.253,23.071)
C5: (38.268,8.134,22.398)
C4: (38.285,6.931,23.076)
P: (35.409,4.915,17.577)
C4': (36.342,3.221,20.992)
C2': (36.126,4.284,23.091)
C2: (39.215,7.840,24.846)
N1: (39.264,9.069,24.318)
N3: (38.751,6.713,24.315)
N6: (38.819,10.479,22.552)
N7: (37.709,7.980,21.138)
N9: (37.718,6.013,22.225)
O5': (35.845,4.602,19.075)
O3': (34.180,3.167,22.087)
OP2: (35.222,6.381,17.433)
C3': (35.327,3.971,21.835)
C1': (37.503,4.592,22.500)
C5': (36.081,3.252,19.506)
O4': (37.601,3.885,21.276)
C8: (37.400,6.707,21.086)
O2': (36.253,3.163,23.939)
C6: (38.784,9.253,23.071)
C5: (38.268,8.134,22.398)
C4: (38.285,6.931,23.076)
P: (35.409,4.915,17.577)
C4': (36.342,3.221,20.992)
C2': (36.126,4.284,23.091)
C2: (39.215,7.840,24.846)
N1: (39.264,9.069,24.318)
N3: (38.751,6.713,24.315)
N6: (38.819,10.479,22.552)
N7: (37.709,7.980,21.138)
N9: (37.718,6.013,22.225)
O5': (35.845,4.602,19.075)
O3': (34.180,3.167,22.087)
Image (generated by PyMOL):