Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:B21:B47
Extra
PDB:
ATOM 1 O3' A A 20 -6.484 11.573 -20.442 1.00 29.78 O
ATOM 2 P A A 21 -5.153 12.063 -21.186 1.00 32.02 P
ATOM 3 OP1 A A 21 -5.258 13.531 -21.373 1.00 34.98 O
ATOM 4 OP2 A A 21 -4.934 11.192 -22.362 1.00 31.05 O
ATOM 5 O5' A A 21 -4.002 11.739 -20.120 1.00 32.61 O
ATOM 6 C5' A A 21 -3.560 12.713 -19.177 1.00 35.15 C
ATOM 7 C4' A A 21 -2.109 12.474 -18.780 1.00 37.07 C
ATOM 8 O4' A A 21 -1.869 11.063 -18.532 1.00 34.19 O
ATOM 9 C3' A A 21 -1.071 12.895 -19.819 1.00 40.70 C
ATOM 10 O3' A A 21 -0.025 13.620 -19.176 1.00 45.16 O
ATOM 11 C2' A A 21 -0.586 11.559 -20.385 1.00 38.48 C
ATOM 12 O2' A A 21 0.730 11.611 -20.898 1.00 41.51 O
ATOM 13 C1' A A 21 -0.643 10.699 -19.135 1.00 35.59 C
ATOM 14 N9 A A 21 -0.647 9.261 -19.392 1.00 33.53 N
ATOM 15 C8 A A 21 -1.744 8.487 -19.639 1.00 30.52 C
ATOM 16 N7 A A 21 -1.469 7.223 -19.830 1.00 29.55 N
ATOM 17 C5 A A 21 -0.096 7.154 -19.702 1.00 31.49 C
ATOM 18 C6 A A 21 0.812 6.075 -19.794 1.00 32.18 C
ATOM 19 N6 A A 21 0.434 4.818 -20.057 1.00 31.24 N
ATOM 20 N1 A A 21 2.126 6.342 -19.603 1.00 34.43 N
ATOM 21 C2 A A 21 2.497 7.607 -19.341 1.00 36.97 C
ATOM 22 N3 A A 21 1.734 8.699 -19.232 1.00 36.73 N
ATOM 23 C4 A A 21 0.433 8.405 -19.426 1.00 33.87 C
ATOM 24 P U A 22 -0.019 15.223 -19.155 1.00 50.39 P
ATOM 25 OP1 U A 22 -0.887 15.721 -20.247 1.00 51.10 O
ATOM 26 OP2 U A 22 1.393 15.659 -19.092 1.00 54.58 O
ATOM 27 O5' U A 22 -0.722 15.571 -17.758 1.00 50.33 O
TER
ATOM 1 O3' C B 46 7.297 -1.541 -18.142 1.00 36.80 O
ATOM 2 P C B 47 6.931 -1.081 -19.626 1.00 37.93 P
ATOM 3 OP1 C B 47 6.969 -2.284 -20.488 1.00 39.06 O
ATOM 4 OP2 C B 47 7.756 0.100 -19.972 1.00 37.93 O
ATOM 5 O5' C B 47 5.423 -0.573 -19.474 1.00 36.70 O
ATOM 6 C5' C B 47 4.368 -1.444 -19.074 1.00 36.48 C
ATOM 7 C4' C B 47 3.090 -0.641 -18.933 1.00 35.82 C
ATOM 8 O4' C B 47 3.288 0.393 -17.937 1.00 35.25 O
ATOM 9 C3' C B 47 2.692 0.076 -20.219 1.00 36.66 C
ATOM 10 O3' C B 47 1.447 -0.399 -20.694 1.00 36.41 O
ATOM 11 C2' C B 47 2.646 1.562 -19.866 1.00 35.73 C
ATOM 12 O2' C B 47 1.506 2.227 -20.389 1.00 36.24 O
ATOM 13 C1' C B 47 2.601 1.555 -18.344 1.00 34.68 C
ATOM 14 N1 C B 47 3.246 2.779 -17.773 1.00 34.38 N
ATOM 15 C2 C B 47 2.440 3.850 -17.351 1.00 33.60 C
ATOM 16 O2 C B 47 1.209 3.758 -17.432 1.00 33.11 O
ATOM 17 N3 C B 47 3.036 4.963 -16.851 1.00 33.66 N
ATOM 18 C4 C B 47 4.368 5.033 -16.774 1.00 34.18 C
ATOM 19 N4 C B 47 4.902 6.151 -16.275 1.00 33.87 N
ATOM 20 C5 C B 47 5.207 3.961 -17.208 1.00 34.75 C
ATOM 21 C6 C B 47 4.612 2.867 -17.699 1.00 34.65 C
ATOM 22 P U B 48 1.259 -0.637 -22.269 1.00 37.79 P
ATOM 23 OP1 U B 48 1.102 -2.099 -22.466 1.00 38.77 O
ATOM 24 OP2 U B 48 2.321 0.094 -22.998 1.00 38.57 O
ATOM 25 O5' U B 48 -0.126 0.102 -22.591 1.00 36.65 O
TER
ATOM 2 P A A 21 -5.153 12.063 -21.186 1.00 32.02 P
ATOM 3 OP1 A A 21 -5.258 13.531 -21.373 1.00 34.98 O
ATOM 4 OP2 A A 21 -4.934 11.192 -22.362 1.00 31.05 O
ATOM 5 O5' A A 21 -4.002 11.739 -20.120 1.00 32.61 O
ATOM 6 C5' A A 21 -3.560 12.713 -19.177 1.00 35.15 C
ATOM 7 C4' A A 21 -2.109 12.474 -18.780 1.00 37.07 C
ATOM 8 O4' A A 21 -1.869 11.063 -18.532 1.00 34.19 O
ATOM 9 C3' A A 21 -1.071 12.895 -19.819 1.00 40.70 C
ATOM 10 O3' A A 21 -0.025 13.620 -19.176 1.00 45.16 O
ATOM 11 C2' A A 21 -0.586 11.559 -20.385 1.00 38.48 C
ATOM 12 O2' A A 21 0.730 11.611 -20.898 1.00 41.51 O
ATOM 13 C1' A A 21 -0.643 10.699 -19.135 1.00 35.59 C
ATOM 14 N9 A A 21 -0.647 9.261 -19.392 1.00 33.53 N
ATOM 15 C8 A A 21 -1.744 8.487 -19.639 1.00 30.52 C
ATOM 16 N7 A A 21 -1.469 7.223 -19.830 1.00 29.55 N
ATOM 17 C5 A A 21 -0.096 7.154 -19.702 1.00 31.49 C
ATOM 18 C6 A A 21 0.812 6.075 -19.794 1.00 32.18 C
ATOM 19 N6 A A 21 0.434 4.818 -20.057 1.00 31.24 N
ATOM 20 N1 A A 21 2.126 6.342 -19.603 1.00 34.43 N
ATOM 21 C2 A A 21 2.497 7.607 -19.341 1.00 36.97 C
ATOM 22 N3 A A 21 1.734 8.699 -19.232 1.00 36.73 N
ATOM 23 C4 A A 21 0.433 8.405 -19.426 1.00 33.87 C
ATOM 24 P U A 22 -0.019 15.223 -19.155 1.00 50.39 P
ATOM 25 OP1 U A 22 -0.887 15.721 -20.247 1.00 51.10 O
ATOM 26 OP2 U A 22 1.393 15.659 -19.092 1.00 54.58 O
ATOM 27 O5' U A 22 -0.722 15.571 -17.758 1.00 50.33 O
TER
ATOM 1 O3' C B 46 7.297 -1.541 -18.142 1.00 36.80 O
ATOM 2 P C B 47 6.931 -1.081 -19.626 1.00 37.93 P
ATOM 3 OP1 C B 47 6.969 -2.284 -20.488 1.00 39.06 O
ATOM 4 OP2 C B 47 7.756 0.100 -19.972 1.00 37.93 O
ATOM 5 O5' C B 47 5.423 -0.573 -19.474 1.00 36.70 O
ATOM 6 C5' C B 47 4.368 -1.444 -19.074 1.00 36.48 C
ATOM 7 C4' C B 47 3.090 -0.641 -18.933 1.00 35.82 C
ATOM 8 O4' C B 47 3.288 0.393 -17.937 1.00 35.25 O
ATOM 9 C3' C B 47 2.692 0.076 -20.219 1.00 36.66 C
ATOM 10 O3' C B 47 1.447 -0.399 -20.694 1.00 36.41 O
ATOM 11 C2' C B 47 2.646 1.562 -19.866 1.00 35.73 C
ATOM 12 O2' C B 47 1.506 2.227 -20.389 1.00 36.24 O
ATOM 13 C1' C B 47 2.601 1.555 -18.344 1.00 34.68 C
ATOM 14 N1 C B 47 3.246 2.779 -17.773 1.00 34.38 N
ATOM 15 C2 C B 47 2.440 3.850 -17.351 1.00 33.60 C
ATOM 16 O2 C B 47 1.209 3.758 -17.432 1.00 33.11 O
ATOM 17 N3 C B 47 3.036 4.963 -16.851 1.00 33.66 N
ATOM 18 C4 C B 47 4.368 5.033 -16.774 1.00 34.18 C
ATOM 19 N4 C B 47 4.902 6.151 -16.275 1.00 33.87 N
ATOM 20 C5 C B 47 5.207 3.961 -17.208 1.00 34.75 C
ATOM 21 C6 C B 47 4.612 2.867 -17.699 1.00 34.65 C
ATOM 22 P U B 48 1.259 -0.637 -22.269 1.00 37.79 P
ATOM 23 OP1 U B 48 1.102 -2.099 -22.466 1.00 38.77 O
ATOM 24 OP2 U B 48 2.321 0.094 -22.998 1.00 38.57 O
ATOM 25 O5' U B 48 -0.126 0.102 -22.591 1.00 36.65 O
TER
Atoms:
OP1: (-5.258,13.531,-21.373)
OP2: (-4.934,11.192,-22.362)
C3': (-1.071,12.895,-19.819)
C1': (-0.643,10.699,-19.135)
C5': (-3.560,12.713,-19.177)
O4': (-1.869,11.063,-18.532)
C8: (-1.744,8.487,-19.639)
O2': (0.730,11.611,-20.898)
C6: (0.812,6.075,-19.794)
C5: (-0.096,7.154,-19.702)
C4: (0.433,8.405,-19.426)
P: (-5.153,12.063,-21.186)
C4': (-2.109,12.474,-18.780)
C2': (-0.586,11.559,-20.385)
C2: (2.497,7.607,-19.341)
N1: (2.126,6.342,-19.603)
N3: (1.734,8.699,-19.232)
N6: (0.434,4.818,-20.057)
N7: (-1.469,7.223,-19.830)
N9: (-0.647,9.261,-19.392)
O5': (-4.002,11.739,-20.120)
O3': (-0.025,13.620,-19.176)
OP2: (-4.934,11.192,-22.362)
C3': (-1.071,12.895,-19.819)
C1': (-0.643,10.699,-19.135)
C5': (-3.560,12.713,-19.177)
O4': (-1.869,11.063,-18.532)
C8: (-1.744,8.487,-19.639)
O2': (0.730,11.611,-20.898)
C6: (0.812,6.075,-19.794)
C5: (-0.096,7.154,-19.702)
C4: (0.433,8.405,-19.426)
P: (-5.153,12.063,-21.186)
C4': (-2.109,12.474,-18.780)
C2': (-0.586,11.559,-20.385)
C2: (2.497,7.607,-19.341)
N1: (2.126,6.342,-19.603)
N3: (1.734,8.699,-19.232)
N6: (0.434,4.818,-20.057)
N7: (-1.469,7.223,-19.830)
N9: (-0.647,9.261,-19.392)
O5': (-4.002,11.739,-20.120)
O3': (-0.025,13.620,-19.176)
C2: (2.440,3.850,-17.351)
OP1: (6.969,-2.284,-20.488)
OP2: (7.756,0.100,-19.972)
C4: (4.368,5.033,-16.774)
O5': (5.423,-0.573,-19.474)
C3': (2.692,0.076,-20.219)
C1': (2.601,1.555,-18.344)
O4': (3.288,0.393,-17.937)
C5': (4.368,-1.444,-19.074)
P: (6.931,-1.081,-19.626)
O2: (1.209,3.758,-17.432)
C4': (3.090,-0.641,-18.933)
C2': (2.646,1.562,-19.866)
O2': (1.506,2.227,-20.389)
N1: (3.246,2.779,-17.773)
N3: (3.036,4.963,-16.851)
N4: (4.902,6.151,-16.275)
C6: (4.612,2.867,-17.699)
C5: (5.207,3.961,-17.208)
O3': (1.447,-0.399,-20.694)
OP1: (6.969,-2.284,-20.488)
OP2: (7.756,0.100,-19.972)
C4: (4.368,5.033,-16.774)
O5': (5.423,-0.573,-19.474)
C3': (2.692,0.076,-20.219)
C1': (2.601,1.555,-18.344)
O4': (3.288,0.393,-17.937)
C5': (4.368,-1.444,-19.074)
P: (6.931,-1.081,-19.626)
O2: (1.209,3.758,-17.432)
C4': (3.090,-0.641,-18.933)
C2': (2.646,1.562,-19.866)
O2': (1.506,2.227,-20.389)
N1: (3.246,2.779,-17.773)
N3: (3.036,4.963,-16.851)
N4: (4.902,6.151,-16.275)
C6: (4.612,2.867,-17.699)
C5: (5.207,3.961,-17.208)
O3': (1.447,-0.399,-20.694)
Image (generated by PyMOL):