Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:B12:B9
Extra
PDB:
ATOM 1 O3' C A 11 52.710 37.072 111.405 1.00 50.36 O
ATOM 2 P A A 12 54.182 36.626 111.831 1.00 51.65 P
ATOM 3 OP1 A A 12 54.126 35.610 112.905 1.00 52.20 O
ATOM 4 OP2 A A 12 54.950 37.877 112.058 1.00 52.88 O
ATOM 5 O5' A A 12 54.715 35.896 110.525 1.00 47.89 O
ATOM 6 C5' A A 12 54.601 34.480 110.401 1.00 46.92 C
ATOM 7 C4' A A 12 55.295 34.014 109.153 1.00 45.33 C
ATOM 8 O4' A A 12 54.506 34.386 107.994 1.00 45.10 O
ATOM 9 C3' A A 12 56.690 34.580 108.909 1.00 44.75 C
ATOM 10 O3' A A 12 57.434 33.597 108.204 1.00 43.78 O
ATOM 11 C2' A A 12 56.397 35.726 107.952 1.00 45.00 C
ATOM 12 O2' A A 12 57.465 36.124 107.123 1.00 46.24 O
ATOM 13 C1' A A 12 55.322 35.084 107.092 1.00 45.11 C
ATOM 14 N9 A A 12 54.514 36.043 106.355 1.00 45.35 N
ATOM 15 C8 A A 12 53.392 36.744 106.727 1.00 44.80 C
ATOM 16 N7 A A 12 52.932 37.533 105.789 1.00 42.80 N
ATOM 17 C5 A A 12 53.805 37.333 104.730 1.00 44.62 C
ATOM 18 C6 A A 12 53.862 37.870 103.438 1.00 45.16 C
ATOM 19 N6 A A 12 52.978 38.747 102.966 1.00 43.61 N
ATOM 20 N1 A A 12 54.872 37.467 102.631 1.00 45.90 N
ATOM 21 C2 A A 12 55.753 36.572 103.102 1.00 46.41 C
ATOM 22 N3 A A 12 55.798 35.986 104.294 1.00 45.57 N
ATOM 23 C4 A A 12 54.785 36.419 105.068 1.00 45.20 C
ATOM 24 P G A 13 58.799 33.026 108.817 1.00 44.90 P
ATOM 25 OP1 G A 13 59.129 31.839 107.988 1.00 44.05 O
ATOM 26 OP2 G A 13 58.623 32.876 110.278 1.00 44.17 O
ATOM 27 O5' G A 13 59.888 34.171 108.567 1.00 46.50 O
TER
ATOM 1 O3' C B 8 51.514 42.102 98.473 1.00 37.65 O
ATOM 2 P C B 9 52.839 43.028 98.381 1.00 39.06 P
ATOM 3 OP1 C B 9 52.478 44.355 98.902 1.00 39.07 O
ATOM 4 OP2 C B 9 53.443 42.904 97.028 1.00 39.85 O
ATOM 5 O5' C B 9 53.883 42.401 99.403 1.00 36.23 O
ATOM 6 C5' C B 9 53.590 42.346 100.801 1.00 37.72 C
ATOM 7 C4' C B 9 54.543 41.406 101.504 1.00 39.58 C
ATOM 8 O4' C B 9 54.622 40.160 100.757 1.00 40.41 O
ATOM 9 C3' C B 9 55.987 41.861 101.704 1.00 38.26 C
ATOM 10 O3' C B 9 56.457 41.284 102.911 1.00 40.95 O
ATOM 11 C2' C B 9 56.722 41.181 100.564 1.00 37.19 C
ATOM 12 O2' C B 9 58.082 40.937 100.859 1.00 35.52 O
ATOM 13 C1' C B 9 55.973 39.859 100.493 1.00 38.95 C
ATOM 14 N1 C B 9 56.060 39.233 99.178 1.00 39.68 N
ATOM 15 C2 C B 9 56.750 38.034 99.057 1.00 41.51 C
ATOM 16 O2 C B 9 57.267 37.522 100.070 1.00 43.81 O
ATOM 17 N3 C B 9 56.842 37.453 97.847 1.00 41.79 N
ATOM 18 C4 C B 9 56.282 38.028 96.786 1.00 40.78 C
ATOM 19 N4 C B 9 56.409 37.419 95.613 1.00 42.03 N
ATOM 20 C5 C B 9 55.570 39.250 96.881 1.00 40.36 C
ATOM 21 C6 C B 9 55.482 39.812 98.085 1.00 39.66 C
ATOM 22 P A B 10 56.728 42.222 104.171 1.00 44.19 P
ATOM 23 OP1 A B 10 55.507 43.040 104.388 1.00 42.80 O
ATOM 24 OP2 A B 10 58.027 42.887 103.923 1.00 43.72 O
ATOM 25 O5' A B 10 56.917 41.217 105.394 1.00 46.16 O
TER
ATOM 2 P A A 12 54.182 36.626 111.831 1.00 51.65 P
ATOM 3 OP1 A A 12 54.126 35.610 112.905 1.00 52.20 O
ATOM 4 OP2 A A 12 54.950 37.877 112.058 1.00 52.88 O
ATOM 5 O5' A A 12 54.715 35.896 110.525 1.00 47.89 O
ATOM 6 C5' A A 12 54.601 34.480 110.401 1.00 46.92 C
ATOM 7 C4' A A 12 55.295 34.014 109.153 1.00 45.33 C
ATOM 8 O4' A A 12 54.506 34.386 107.994 1.00 45.10 O
ATOM 9 C3' A A 12 56.690 34.580 108.909 1.00 44.75 C
ATOM 10 O3' A A 12 57.434 33.597 108.204 1.00 43.78 O
ATOM 11 C2' A A 12 56.397 35.726 107.952 1.00 45.00 C
ATOM 12 O2' A A 12 57.465 36.124 107.123 1.00 46.24 O
ATOM 13 C1' A A 12 55.322 35.084 107.092 1.00 45.11 C
ATOM 14 N9 A A 12 54.514 36.043 106.355 1.00 45.35 N
ATOM 15 C8 A A 12 53.392 36.744 106.727 1.00 44.80 C
ATOM 16 N7 A A 12 52.932 37.533 105.789 1.00 42.80 N
ATOM 17 C5 A A 12 53.805 37.333 104.730 1.00 44.62 C
ATOM 18 C6 A A 12 53.862 37.870 103.438 1.00 45.16 C
ATOM 19 N6 A A 12 52.978 38.747 102.966 1.00 43.61 N
ATOM 20 N1 A A 12 54.872 37.467 102.631 1.00 45.90 N
ATOM 21 C2 A A 12 55.753 36.572 103.102 1.00 46.41 C
ATOM 22 N3 A A 12 55.798 35.986 104.294 1.00 45.57 N
ATOM 23 C4 A A 12 54.785 36.419 105.068 1.00 45.20 C
ATOM 24 P G A 13 58.799 33.026 108.817 1.00 44.90 P
ATOM 25 OP1 G A 13 59.129 31.839 107.988 1.00 44.05 O
ATOM 26 OP2 G A 13 58.623 32.876 110.278 1.00 44.17 O
ATOM 27 O5' G A 13 59.888 34.171 108.567 1.00 46.50 O
TER
ATOM 1 O3' C B 8 51.514 42.102 98.473 1.00 37.65 O
ATOM 2 P C B 9 52.839 43.028 98.381 1.00 39.06 P
ATOM 3 OP1 C B 9 52.478 44.355 98.902 1.00 39.07 O
ATOM 4 OP2 C B 9 53.443 42.904 97.028 1.00 39.85 O
ATOM 5 O5' C B 9 53.883 42.401 99.403 1.00 36.23 O
ATOM 6 C5' C B 9 53.590 42.346 100.801 1.00 37.72 C
ATOM 7 C4' C B 9 54.543 41.406 101.504 1.00 39.58 C
ATOM 8 O4' C B 9 54.622 40.160 100.757 1.00 40.41 O
ATOM 9 C3' C B 9 55.987 41.861 101.704 1.00 38.26 C
ATOM 10 O3' C B 9 56.457 41.284 102.911 1.00 40.95 O
ATOM 11 C2' C B 9 56.722 41.181 100.564 1.00 37.19 C
ATOM 12 O2' C B 9 58.082 40.937 100.859 1.00 35.52 O
ATOM 13 C1' C B 9 55.973 39.859 100.493 1.00 38.95 C
ATOM 14 N1 C B 9 56.060 39.233 99.178 1.00 39.68 N
ATOM 15 C2 C B 9 56.750 38.034 99.057 1.00 41.51 C
ATOM 16 O2 C B 9 57.267 37.522 100.070 1.00 43.81 O
ATOM 17 N3 C B 9 56.842 37.453 97.847 1.00 41.79 N
ATOM 18 C4 C B 9 56.282 38.028 96.786 1.00 40.78 C
ATOM 19 N4 C B 9 56.409 37.419 95.613 1.00 42.03 N
ATOM 20 C5 C B 9 55.570 39.250 96.881 1.00 40.36 C
ATOM 21 C6 C B 9 55.482 39.812 98.085 1.00 39.66 C
ATOM 22 P A B 10 56.728 42.222 104.171 1.00 44.19 P
ATOM 23 OP1 A B 10 55.507 43.040 104.388 1.00 42.80 O
ATOM 24 OP2 A B 10 58.027 42.887 103.923 1.00 43.72 O
ATOM 25 O5' A B 10 56.917 41.217 105.394 1.00 46.16 O
TER
Atoms:
OP1: (54.126,35.610,112.905)
OP2: (54.950,37.877,112.058)
C3': (56.690,34.580,108.909)
C1': (55.322,35.084,107.092)
C5': (54.601,34.480,110.401)
O4': (54.506,34.386,107.994)
C8: (53.392,36.744,106.727)
O2': (57.465,36.124,107.123)
C6: (53.862,37.870,103.438)
C5: (53.805,37.333,104.730)
C4: (54.785,36.419,105.068)
P: (54.182,36.626,111.831)
C4': (55.295,34.014,109.153)
C2': (56.397,35.726,107.952)
C2: (55.753,36.572,103.102)
N1: (54.872,37.467,102.631)
N3: (55.798,35.986,104.294)
N6: (52.978,38.747,102.966)
N7: (52.932,37.533,105.789)
N9: (54.514,36.043,106.355)
O5': (54.715,35.896,110.525)
O3': (57.434,33.597,108.204)
OP2: (54.950,37.877,112.058)
C3': (56.690,34.580,108.909)
C1': (55.322,35.084,107.092)
C5': (54.601,34.480,110.401)
O4': (54.506,34.386,107.994)
C8: (53.392,36.744,106.727)
O2': (57.465,36.124,107.123)
C6: (53.862,37.870,103.438)
C5: (53.805,37.333,104.730)
C4: (54.785,36.419,105.068)
P: (54.182,36.626,111.831)
C4': (55.295,34.014,109.153)
C2': (56.397,35.726,107.952)
C2: (55.753,36.572,103.102)
N1: (54.872,37.467,102.631)
N3: (55.798,35.986,104.294)
N6: (52.978,38.747,102.966)
N7: (52.932,37.533,105.789)
N9: (54.514,36.043,106.355)
O5': (54.715,35.896,110.525)
O3': (57.434,33.597,108.204)
C2: (56.750,38.034,99.057)
OP1: (52.478,44.355,98.902)
OP2: (53.443,42.904,97.028)
C4: (56.282,38.028,96.786)
O5': (53.883,42.401,99.403)
C3': (55.987,41.861,101.704)
C1': (55.973,39.859,100.493)
O4': (54.622,40.160,100.757)
C5': (53.590,42.346,100.801)
P: (52.839,43.028,98.381)
O2: (57.267,37.522,100.070)
C4': (54.543,41.406,101.504)
C2': (56.722,41.181,100.564)
O2': (58.082,40.937,100.859)
N1: (56.060,39.233,99.178)
N3: (56.842,37.453,97.847)
N4: (56.409,37.419,95.613)
C6: (55.482,39.812,98.085)
C5: (55.570,39.250,96.881)
O3': (56.457,41.284,102.911)
OP1: (52.478,44.355,98.902)
OP2: (53.443,42.904,97.028)
C4: (56.282,38.028,96.786)
O5': (53.883,42.401,99.403)
C3': (55.987,41.861,101.704)
C1': (55.973,39.859,100.493)
O4': (54.622,40.160,100.757)
C5': (53.590,42.346,100.801)
P: (52.839,43.028,98.381)
O2: (57.267,37.522,100.070)
C4': (54.543,41.406,101.504)
C2': (56.722,41.181,100.564)
O2': (58.082,40.937,100.859)
N1: (56.060,39.233,99.178)
N3: (56.842,37.453,97.847)
N4: (56.409,37.419,95.613)
C6: (55.482,39.812,98.085)
C5: (55.570,39.250,96.881)
O3': (56.457,41.284,102.911)
Image (generated by PyMOL):