Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1239:A1237
Extra
PDB:
ATOM 1 O3' U A1238 -144.485 36.089 27.197 1.00 45.29 O
ATOM 2 P G A1239 -146.010 35.747 26.793 1.00 52.24 P
ATOM 3 OP1 G A1239 -146.172 36.060 25.346 1.00 52.24 O
ATOM 4 OP2 G A1239 -146.883 36.432 27.774 1.00 52.24 O
ATOM 5 O5' G A1239 -146.086 34.175 27.006 1.00 52.24 O
ATOM 6 C5' G A1239 -145.561 33.295 26.030 1.00 52.24 C
ATOM 7 C4' G A1239 -146.075 31.900 26.216 1.00 52.24 C
ATOM 8 O4' G A1239 -145.840 31.473 27.584 1.00 52.24 O
ATOM 9 C3' G A1239 -147.568 31.713 26.025 1.00 52.24 C
ATOM 10 O3' G A1239 -147.948 31.626 24.659 1.00 52.24 O
ATOM 11 C2' G A1239 -147.823 30.442 26.812 1.00 52.24 C
ATOM 12 O2' G A1239 -147.364 29.311 26.090 1.00 52.24 O
ATOM 13 C1' G A1239 -146.902 30.656 28.015 1.00 52.24 C
ATOM 14 N9 G A1239 -147.587 31.341 29.132 1.00 52.49 N
ATOM 15 C8 G A1239 -147.432 32.669 29.451 1.00 52.49 C
ATOM 16 N7 G A1239 -148.147 33.038 30.479 1.00 52.49 N
ATOM 17 C5 G A1239 -148.825 31.889 30.888 1.00 52.49 C
ATOM 18 C6 G A1239 -149.750 31.681 31.966 1.00 52.49 C
ATOM 19 O6 G A1239 -150.175 32.483 32.817 1.00 52.49 O
ATOM 20 N1 G A1239 -150.199 30.366 32.012 1.00 52.49 N
ATOM 21 C2 G A1239 -149.809 29.374 31.154 1.00 52.49 C
ATOM 22 N2 G A1239 -150.359 28.177 31.393 1.00 52.49 N
ATOM 23 N3 G A1239 -148.951 29.544 30.151 1.00 52.49 N
ATOM 24 C4 G A1239 -148.486 30.821 30.065 1.00 52.49 C
ATOM 25 P G A1240 -149.340 32.266 24.160 1.00 49.57 P
ATOM 26 OP1 G A1240 -149.217 32.509 22.707 1.00 49.57 O
ATOM 27 OP2 G A1240 -149.638 33.417 25.056 1.00 49.57 O
ATOM 28 O5' G A1240 -150.388 31.096 24.420 1.00 49.57 O
TER
ATOM 1 O3' A B1236 -141.660 28.778 28.257 1.00 32.81 O
ATOM 2 P A B1237 -141.318 29.234 29.746 1.00 55.17 P
ATOM 3 OP1 A B1237 -140.912 30.665 29.685 1.00 55.17 O
ATOM 4 OP2 A B1237 -140.366 28.239 30.301 1.00 55.17 O
ATOM 5 O5' A B1237 -142.706 29.124 30.479 1.00 55.17 O
ATOM 6 C5' A B1237 -142.916 29.850 31.670 1.00 55.17 C
ATOM 7 C4' A B1237 -143.688 31.110 31.423 1.00 55.17 C
ATOM 8 O4' A B1237 -145.035 30.741 31.100 1.00 55.17 O
ATOM 9 C3' A B1237 -143.804 31.991 32.638 1.00 55.17 C
ATOM 10 O3' A B1237 -144.154 33.313 32.253 1.00 55.17 O
ATOM 11 C2' A B1237 -144.947 31.349 33.397 1.00 55.17 C
ATOM 12 O2' A B1237 -145.650 32.233 34.248 1.00 55.17 O
ATOM 13 C1' A B1237 -145.836 30.812 32.265 1.00 55.17 C
ATOM 14 N9 A B1237 -146.346 29.466 32.523 1.00 55.27 N
ATOM 15 C8 A B1237 -145.800 28.277 32.109 1.00 55.27 C
ATOM 16 N7 A B1237 -146.484 27.227 32.486 1.00 55.27 N
ATOM 17 C5 A B1237 -147.551 27.764 33.202 1.00 55.27 C
ATOM 18 C6 A B1237 -148.655 27.186 33.872 1.00 55.27 C
ATOM 19 N6 A B1237 -148.870 25.869 33.930 1.00 55.27 N
ATOM 20 N1 A B1237 -149.544 28.016 34.481 1.00 55.27 N
ATOM 21 C2 A B1237 -149.333 29.334 34.428 1.00 55.27 C
ATOM 22 N3 A B1237 -148.340 29.991 33.837 1.00 55.27 N
ATOM 23 C4 A B1237 -147.476 29.146 33.234 1.00 55.27 C
ATOM 24 P U B1238 -143.252 34.542 32.761 1.00 45.29 P
ATOM 25 OP1 U B1238 -141.898 33.987 33.046 1.00 45.29 O
ATOM 26 OP2 U B1238 -143.995 35.223 33.869 1.00 45.29 O
ATOM 27 O5' U B1238 -143.187 35.491 31.478 1.00 45.29 O
TER
ATOM 2 P G A1239 -146.010 35.747 26.793 1.00 52.24 P
ATOM 3 OP1 G A1239 -146.172 36.060 25.346 1.00 52.24 O
ATOM 4 OP2 G A1239 -146.883 36.432 27.774 1.00 52.24 O
ATOM 5 O5' G A1239 -146.086 34.175 27.006 1.00 52.24 O
ATOM 6 C5' G A1239 -145.561 33.295 26.030 1.00 52.24 C
ATOM 7 C4' G A1239 -146.075 31.900 26.216 1.00 52.24 C
ATOM 8 O4' G A1239 -145.840 31.473 27.584 1.00 52.24 O
ATOM 9 C3' G A1239 -147.568 31.713 26.025 1.00 52.24 C
ATOM 10 O3' G A1239 -147.948 31.626 24.659 1.00 52.24 O
ATOM 11 C2' G A1239 -147.823 30.442 26.812 1.00 52.24 C
ATOM 12 O2' G A1239 -147.364 29.311 26.090 1.00 52.24 O
ATOM 13 C1' G A1239 -146.902 30.656 28.015 1.00 52.24 C
ATOM 14 N9 G A1239 -147.587 31.341 29.132 1.00 52.49 N
ATOM 15 C8 G A1239 -147.432 32.669 29.451 1.00 52.49 C
ATOM 16 N7 G A1239 -148.147 33.038 30.479 1.00 52.49 N
ATOM 17 C5 G A1239 -148.825 31.889 30.888 1.00 52.49 C
ATOM 18 C6 G A1239 -149.750 31.681 31.966 1.00 52.49 C
ATOM 19 O6 G A1239 -150.175 32.483 32.817 1.00 52.49 O
ATOM 20 N1 G A1239 -150.199 30.366 32.012 1.00 52.49 N
ATOM 21 C2 G A1239 -149.809 29.374 31.154 1.00 52.49 C
ATOM 22 N2 G A1239 -150.359 28.177 31.393 1.00 52.49 N
ATOM 23 N3 G A1239 -148.951 29.544 30.151 1.00 52.49 N
ATOM 24 C4 G A1239 -148.486 30.821 30.065 1.00 52.49 C
ATOM 25 P G A1240 -149.340 32.266 24.160 1.00 49.57 P
ATOM 26 OP1 G A1240 -149.217 32.509 22.707 1.00 49.57 O
ATOM 27 OP2 G A1240 -149.638 33.417 25.056 1.00 49.57 O
ATOM 28 O5' G A1240 -150.388 31.096 24.420 1.00 49.57 O
TER
ATOM 1 O3' A B1236 -141.660 28.778 28.257 1.00 32.81 O
ATOM 2 P A B1237 -141.318 29.234 29.746 1.00 55.17 P
ATOM 3 OP1 A B1237 -140.912 30.665 29.685 1.00 55.17 O
ATOM 4 OP2 A B1237 -140.366 28.239 30.301 1.00 55.17 O
ATOM 5 O5' A B1237 -142.706 29.124 30.479 1.00 55.17 O
ATOM 6 C5' A B1237 -142.916 29.850 31.670 1.00 55.17 C
ATOM 7 C4' A B1237 -143.688 31.110 31.423 1.00 55.17 C
ATOM 8 O4' A B1237 -145.035 30.741 31.100 1.00 55.17 O
ATOM 9 C3' A B1237 -143.804 31.991 32.638 1.00 55.17 C
ATOM 10 O3' A B1237 -144.154 33.313 32.253 1.00 55.17 O
ATOM 11 C2' A B1237 -144.947 31.349 33.397 1.00 55.17 C
ATOM 12 O2' A B1237 -145.650 32.233 34.248 1.00 55.17 O
ATOM 13 C1' A B1237 -145.836 30.812 32.265 1.00 55.17 C
ATOM 14 N9 A B1237 -146.346 29.466 32.523 1.00 55.27 N
ATOM 15 C8 A B1237 -145.800 28.277 32.109 1.00 55.27 C
ATOM 16 N7 A B1237 -146.484 27.227 32.486 1.00 55.27 N
ATOM 17 C5 A B1237 -147.551 27.764 33.202 1.00 55.27 C
ATOM 18 C6 A B1237 -148.655 27.186 33.872 1.00 55.27 C
ATOM 19 N6 A B1237 -148.870 25.869 33.930 1.00 55.27 N
ATOM 20 N1 A B1237 -149.544 28.016 34.481 1.00 55.27 N
ATOM 21 C2 A B1237 -149.333 29.334 34.428 1.00 55.27 C
ATOM 22 N3 A B1237 -148.340 29.991 33.837 1.00 55.27 N
ATOM 23 C4 A B1237 -147.476 29.146 33.234 1.00 55.27 C
ATOM 24 P U B1238 -143.252 34.542 32.761 1.00 45.29 P
ATOM 25 OP1 U B1238 -141.898 33.987 33.046 1.00 45.29 O
ATOM 26 OP2 U B1238 -143.995 35.223 33.869 1.00 45.29 O
ATOM 27 O5' U B1238 -143.187 35.491 31.478 1.00 45.29 O
TER
Atoms:
OP1: (-146.172,36.060,25.346)
OP2: (-146.883,36.432,27.774)
C3': (-147.568,31.713,26.025)
C1': (-146.902,30.656,28.015)
C5': (-145.561,33.295,26.030)
O6: (-150.175,32.483,32.817)
O4': (-145.840,31.473,27.584)
C8: (-147.432,32.669,29.451)
C2: (-149.809,29.374,31.154)
C6: (-149.750,31.681,31.966)
C5: (-148.825,31.889,30.888)
C4: (-148.486,30.821,30.065)
P: (-146.010,35.747,26.793)
C4': (-146.075,31.900,26.216)
C2': (-147.823,30.442,26.812)
O2': (-147.364,29.311,26.090)
N1: (-150.199,30.366,32.012)
N2: (-150.359,28.177,31.393)
N3: (-148.951,29.544,30.151)
N7: (-148.147,33.038,30.479)
N9: (-147.587,31.341,29.132)
O5': (-146.086,34.175,27.006)
O3': (-147.948,31.626,24.659)
OP2: (-146.883,36.432,27.774)
C3': (-147.568,31.713,26.025)
C1': (-146.902,30.656,28.015)
C5': (-145.561,33.295,26.030)
O6: (-150.175,32.483,32.817)
O4': (-145.840,31.473,27.584)
C8: (-147.432,32.669,29.451)
C2: (-149.809,29.374,31.154)
C6: (-149.750,31.681,31.966)
C5: (-148.825,31.889,30.888)
C4: (-148.486,30.821,30.065)
P: (-146.010,35.747,26.793)
C4': (-146.075,31.900,26.216)
C2': (-147.823,30.442,26.812)
O2': (-147.364,29.311,26.090)
N1: (-150.199,30.366,32.012)
N2: (-150.359,28.177,31.393)
N3: (-148.951,29.544,30.151)
N7: (-148.147,33.038,30.479)
N9: (-147.587,31.341,29.132)
O5': (-146.086,34.175,27.006)
O3': (-147.948,31.626,24.659)
OP1: (-140.912,30.665,29.685)
OP2: (-140.366,28.239,30.301)
C3': (-143.804,31.991,32.638)
C1': (-145.836,30.812,32.265)
C5': (-142.916,29.850,31.670)
O4': (-145.035,30.741,31.100)
C8: (-145.800,28.277,32.109)
O2': (-145.650,32.233,34.248)
C6: (-148.655,27.186,33.872)
C5: (-147.551,27.764,33.202)
C4: (-147.476,29.146,33.234)
P: (-141.318,29.234,29.746)
C4': (-143.688,31.110,31.423)
C2': (-144.947,31.349,33.397)
C2: (-149.333,29.334,34.428)
N1: (-149.544,28.016,34.481)
N3: (-148.340,29.991,33.837)
N6: (-148.870,25.869,33.930)
N7: (-146.484,27.227,32.486)
N9: (-146.346,29.466,32.523)
O5': (-142.706,29.124,30.479)
O3': (-144.154,33.313,32.253)
OP2: (-140.366,28.239,30.301)
C3': (-143.804,31.991,32.638)
C1': (-145.836,30.812,32.265)
C5': (-142.916,29.850,31.670)
O4': (-145.035,30.741,31.100)
C8: (-145.800,28.277,32.109)
O2': (-145.650,32.233,34.248)
C6: (-148.655,27.186,33.872)
C5: (-147.551,27.764,33.202)
C4: (-147.476,29.146,33.234)
P: (-141.318,29.234,29.746)
C4': (-143.688,31.110,31.423)
C2': (-144.947,31.349,33.397)
C2: (-149.333,29.334,34.428)
N1: (-149.544,28.016,34.481)
N3: (-148.340,29.991,33.837)
N6: (-148.870,25.869,33.930)
N7: (-146.484,27.227,32.486)
N9: (-146.346,29.466,32.523)
O5': (-142.706,29.124,30.479)
O3': (-144.154,33.313,32.253)
Image (generated by PyMOL):