Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIR:A109:A163
Extra
PDB:
ATOM 1 O3' U A 108 15.251 11.352 8.082 1.00 48.37 O
ATOM 2 P G A 109 15.632 10.032 8.907 1.00 51.11 P
ATOM 3 OP1 G A 109 15.363 8.878 8.010 1.00 50.58 O
ATOM 4 OP2 G A 109 14.987 10.101 10.239 1.00 51.24 O
ATOM 5 O5' G A 109 17.204 10.180 9.175 1.00 51.77 O
ATOM 6 C5' G A 109 18.120 10.289 8.095 1.00 53.70 C
ATOM 7 C4' G A 109 19.183 11.329 8.405 1.00 54.97 C
ATOM 8 O4' G A 109 19.809 11.000 9.677 1.00 56.22 O
ATOM 9 C3' G A 109 20.309 11.416 7.376 1.00 55.08 C
ATOM 10 O3' G A 109 20.019 12.431 6.400 1.00 53.97 O
ATOM 11 C2' G A 109 21.547 11.725 8.228 1.00 56.12 C
ATOM 12 O2' G A 109 21.757 13.113 8.433 1.00 56.54 O
ATOM 13 C1' G A 109 21.223 11.062 9.572 1.00 56.57 C
ATOM 14 N9 G A 109 21.813 9.734 9.818 1.00 57.02 N
ATOM 15 C8 G A 109 22.717 9.445 10.815 1.00 57.61 C
ATOM 16 N7 G A 109 23.100 8.196 10.847 1.00 57.63 N
ATOM 17 C5 G A 109 22.406 7.604 9.801 1.00 57.11 C
ATOM 18 C6 G A 109 22.421 6.259 9.351 1.00 56.82 C
ATOM 19 O6 G A 109 23.070 5.308 9.807 1.00 56.54 O
ATOM 20 N1 G A 109 21.576 6.062 8.260 1.00 56.91 N
ATOM 21 C2 G A 109 20.811 7.049 7.679 1.00 57.12 C
ATOM 22 N2 G A 109 20.050 6.688 6.635 1.00 57.56 N
ATOM 23 N3 G A 109 20.794 8.310 8.092 1.00 57.04 N
ATOM 24 C4 G A 109 21.607 8.530 9.156 1.00 57.02 C
ATOM 25 P C A 110 19.344 12.036 4.995 1.00 53.49 P
ATOM 26 OP1 C A 110 17.901 11.771 5.220 1.00 53.34 O
ATOM 27 OP2 C A 110 20.211 10.994 4.384 1.00 52.89 O
ATOM 28 O5' C A 110 19.400 13.396 4.146 1.00 51.30 O
TER
ATOM 1 O3' G B 162 28.140 11.210 14.319 1.00 23.97 O
ATOM 2 P A B 163 26.857 10.698 13.506 1.00 24.09 P
ATOM 3 OP1 A B 163 26.738 11.469 12.245 1.00 23.48 O
ATOM 4 OP2 A B 163 25.729 10.622 14.463 1.00 23.51 O
ATOM 5 O5' A B 163 27.297 9.212 13.131 1.00 25.65 O
ATOM 6 C5' A B 163 26.929 8.074 13.912 1.00 26.70 C
ATOM 7 C4' A B 163 26.865 6.863 13.001 1.00 27.62 C
ATOM 8 O4' A B 163 25.975 7.135 11.883 1.00 28.61 O
ATOM 9 C3' A B 163 28.205 6.492 12.390 1.00 28.16 C
ATOM 10 O3' A B 163 28.375 5.088 12.389 1.00 27.96 O
ATOM 11 C2' A B 163 28.124 7.045 10.971 1.00 28.93 C
ATOM 12 O2' A B 163 28.922 6.294 10.080 1.00 29.66 O
ATOM 13 C1' A B 163 26.640 6.882 10.663 1.00 30.00 C
ATOM 14 N9 A B 163 26.140 7.809 9.647 1.00 31.46 N
ATOM 15 C8 A B 163 26.051 9.177 9.736 1.00 32.61 C
ATOM 16 N7 A B 163 25.561 9.766 8.665 1.00 32.53 N
ATOM 17 C5 A B 163 25.318 8.707 7.808 1.00 32.21 C
ATOM 18 C6 A B 163 24.796 8.660 6.501 1.00 32.37 C
ATOM 19 N6 A B 163 24.424 9.756 5.834 1.00 31.91 N
ATOM 20 N1 A B 163 24.670 7.446 5.914 1.00 32.85 N
ATOM 21 C2 A B 163 25.049 6.353 6.602 1.00 33.26 C
ATOM 22 N3 A B 163 25.555 6.272 7.840 1.00 32.51 N
ATOM 23 C4 A B 163 25.665 7.495 8.393 1.00 32.08 C
ATOM 24 P G B 164 29.503 4.406 13.293 1.00 28.04 P
ATOM 25 OP1 G B 164 30.002 3.221 12.556 1.00 28.12 O
ATOM 26 OP2 G B 164 28.935 4.227 14.658 1.00 27.70 O
ATOM 27 O5' G B 164 30.662 5.513 13.358 1.00 26.03 O
TER
ATOM 2 P G A 109 15.632 10.032 8.907 1.00 51.11 P
ATOM 3 OP1 G A 109 15.363 8.878 8.010 1.00 50.58 O
ATOM 4 OP2 G A 109 14.987 10.101 10.239 1.00 51.24 O
ATOM 5 O5' G A 109 17.204 10.180 9.175 1.00 51.77 O
ATOM 6 C5' G A 109 18.120 10.289 8.095 1.00 53.70 C
ATOM 7 C4' G A 109 19.183 11.329 8.405 1.00 54.97 C
ATOM 8 O4' G A 109 19.809 11.000 9.677 1.00 56.22 O
ATOM 9 C3' G A 109 20.309 11.416 7.376 1.00 55.08 C
ATOM 10 O3' G A 109 20.019 12.431 6.400 1.00 53.97 O
ATOM 11 C2' G A 109 21.547 11.725 8.228 1.00 56.12 C
ATOM 12 O2' G A 109 21.757 13.113 8.433 1.00 56.54 O
ATOM 13 C1' G A 109 21.223 11.062 9.572 1.00 56.57 C
ATOM 14 N9 G A 109 21.813 9.734 9.818 1.00 57.02 N
ATOM 15 C8 G A 109 22.717 9.445 10.815 1.00 57.61 C
ATOM 16 N7 G A 109 23.100 8.196 10.847 1.00 57.63 N
ATOM 17 C5 G A 109 22.406 7.604 9.801 1.00 57.11 C
ATOM 18 C6 G A 109 22.421 6.259 9.351 1.00 56.82 C
ATOM 19 O6 G A 109 23.070 5.308 9.807 1.00 56.54 O
ATOM 20 N1 G A 109 21.576 6.062 8.260 1.00 56.91 N
ATOM 21 C2 G A 109 20.811 7.049 7.679 1.00 57.12 C
ATOM 22 N2 G A 109 20.050 6.688 6.635 1.00 57.56 N
ATOM 23 N3 G A 109 20.794 8.310 8.092 1.00 57.04 N
ATOM 24 C4 G A 109 21.607 8.530 9.156 1.00 57.02 C
ATOM 25 P C A 110 19.344 12.036 4.995 1.00 53.49 P
ATOM 26 OP1 C A 110 17.901 11.771 5.220 1.00 53.34 O
ATOM 27 OP2 C A 110 20.211 10.994 4.384 1.00 52.89 O
ATOM 28 O5' C A 110 19.400 13.396 4.146 1.00 51.30 O
TER
ATOM 1 O3' G B 162 28.140 11.210 14.319 1.00 23.97 O
ATOM 2 P A B 163 26.857 10.698 13.506 1.00 24.09 P
ATOM 3 OP1 A B 163 26.738 11.469 12.245 1.00 23.48 O
ATOM 4 OP2 A B 163 25.729 10.622 14.463 1.00 23.51 O
ATOM 5 O5' A B 163 27.297 9.212 13.131 1.00 25.65 O
ATOM 6 C5' A B 163 26.929 8.074 13.912 1.00 26.70 C
ATOM 7 C4' A B 163 26.865 6.863 13.001 1.00 27.62 C
ATOM 8 O4' A B 163 25.975 7.135 11.883 1.00 28.61 O
ATOM 9 C3' A B 163 28.205 6.492 12.390 1.00 28.16 C
ATOM 10 O3' A B 163 28.375 5.088 12.389 1.00 27.96 O
ATOM 11 C2' A B 163 28.124 7.045 10.971 1.00 28.93 C
ATOM 12 O2' A B 163 28.922 6.294 10.080 1.00 29.66 O
ATOM 13 C1' A B 163 26.640 6.882 10.663 1.00 30.00 C
ATOM 14 N9 A B 163 26.140 7.809 9.647 1.00 31.46 N
ATOM 15 C8 A B 163 26.051 9.177 9.736 1.00 32.61 C
ATOM 16 N7 A B 163 25.561 9.766 8.665 1.00 32.53 N
ATOM 17 C5 A B 163 25.318 8.707 7.808 1.00 32.21 C
ATOM 18 C6 A B 163 24.796 8.660 6.501 1.00 32.37 C
ATOM 19 N6 A B 163 24.424 9.756 5.834 1.00 31.91 N
ATOM 20 N1 A B 163 24.670 7.446 5.914 1.00 32.85 N
ATOM 21 C2 A B 163 25.049 6.353 6.602 1.00 33.26 C
ATOM 22 N3 A B 163 25.555 6.272 7.840 1.00 32.51 N
ATOM 23 C4 A B 163 25.665 7.495 8.393 1.00 32.08 C
ATOM 24 P G B 164 29.503 4.406 13.293 1.00 28.04 P
ATOM 25 OP1 G B 164 30.002 3.221 12.556 1.00 28.12 O
ATOM 26 OP2 G B 164 28.935 4.227 14.658 1.00 27.70 O
ATOM 27 O5' G B 164 30.662 5.513 13.358 1.00 26.03 O
TER
Atoms:
OP1: (15.363,8.878,8.010)
OP2: (14.987,10.101,10.239)
C3': (20.309,11.416,7.376)
C1': (21.223,11.062,9.572)
C5': (18.120,10.289,8.095)
O6: (23.070,5.308,9.807)
O4': (19.809,11.000,9.677)
C8: (22.717,9.445,10.815)
C2: (20.811,7.049,7.679)
C6: (22.421,6.259,9.351)
C5: (22.406,7.604,9.801)
C4: (21.607,8.530,9.156)
P: (15.632,10.032,8.907)
C4': (19.183,11.329,8.405)
C2': (21.547,11.725,8.228)
O2': (21.757,13.113,8.433)
N1: (21.576,6.062,8.260)
N2: (20.050,6.688,6.635)
N3: (20.794,8.310,8.092)
N7: (23.100,8.196,10.847)
N9: (21.813,9.734,9.818)
O5': (17.204,10.180,9.175)
O3': (20.019,12.431,6.400)
OP2: (14.987,10.101,10.239)
C3': (20.309,11.416,7.376)
C1': (21.223,11.062,9.572)
C5': (18.120,10.289,8.095)
O6: (23.070,5.308,9.807)
O4': (19.809,11.000,9.677)
C8: (22.717,9.445,10.815)
C2: (20.811,7.049,7.679)
C6: (22.421,6.259,9.351)
C5: (22.406,7.604,9.801)
C4: (21.607,8.530,9.156)
P: (15.632,10.032,8.907)
C4': (19.183,11.329,8.405)
C2': (21.547,11.725,8.228)
O2': (21.757,13.113,8.433)
N1: (21.576,6.062,8.260)
N2: (20.050,6.688,6.635)
N3: (20.794,8.310,8.092)
N7: (23.100,8.196,10.847)
N9: (21.813,9.734,9.818)
O5': (17.204,10.180,9.175)
O3': (20.019,12.431,6.400)
OP1: (26.738,11.469,12.245)
OP2: (25.729,10.622,14.463)
C3': (28.205,6.492,12.390)
C1': (26.640,6.882,10.663)
C5': (26.929,8.074,13.912)
O4': (25.975,7.135,11.883)
C8: (26.051,9.177,9.736)
O2': (28.922,6.294,10.080)
C6: (24.796,8.660,6.501)
C5: (25.318,8.707,7.808)
C4: (25.665,7.495,8.393)
P: (26.857,10.698,13.506)
C4': (26.865,6.863,13.001)
C2': (28.124,7.045,10.971)
C2: (25.049,6.353,6.602)
N1: (24.670,7.446,5.914)
N3: (25.555,6.272,7.840)
N6: (24.424,9.756,5.834)
N7: (25.561,9.766,8.665)
N9: (26.140,7.809,9.647)
O5': (27.297,9.212,13.131)
O3': (28.375,5.088,12.389)
OP2: (25.729,10.622,14.463)
C3': (28.205,6.492,12.390)
C1': (26.640,6.882,10.663)
C5': (26.929,8.074,13.912)
O4': (25.975,7.135,11.883)
C8: (26.051,9.177,9.736)
O2': (28.922,6.294,10.080)
C6: (24.796,8.660,6.501)
C5: (25.318,8.707,7.808)
C4: (25.665,7.495,8.393)
P: (26.857,10.698,13.506)
C4': (26.865,6.863,13.001)
C2': (28.124,7.045,10.971)
C2: (25.049,6.353,6.602)
N1: (24.670,7.446,5.914)
N3: (25.555,6.272,7.840)
N6: (24.424,9.756,5.834)
N7: (25.561,9.766,8.665)
N9: (26.140,7.809,9.647)
O5': (27.297,9.212,13.131)
O3': (28.375,5.088,12.389)
Image (generated by PyMOL):