Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:H12:H11
Extra
PDB:
ATOM 1 O3' A A 11 5.432 -23.327 7.124 1.00 55.09 O
ATOM 2 P G A 12 6.220 -23.373 5.737 1.00 57.57 P
ATOM 3 OP1 G A 12 6.788 -24.757 5.673 1.00 56.80 O
ATOM 4 OP2 G A 12 7.136 -22.188 5.724 1.00 57.10 O
ATOM 5 O5' G A 12 5.038 -23.190 4.616 1.00 55.70 O
ATOM 6 C5' G A 12 4.936 -22.148 3.581 1.00 53.30 C
ATOM 7 C4' G A 12 3.985 -21.016 3.983 1.00 51.88 C
ATOM 8 O4' G A 12 4.652 -20.140 4.929 1.00 51.79 O
ATOM 9 C3' G A 12 3.596 -20.001 2.910 1.00 51.93 C
ATOM 10 O3' G A 12 2.605 -20.444 1.986 1.00 52.41 O
ATOM 11 C2' G A 12 3.107 -18.795 3.725 1.00 51.60 C
ATOM 12 O2' G A 12 1.813 -18.872 4.320 1.00 51.84 O
ATOM 13 C1' G A 12 4.205 -18.786 4.778 1.00 50.77 C
ATOM 14 N9 G A 12 5.305 -17.917 4.399 1.00 47.74 N
ATOM 15 C8 G A 12 6.612 -18.274 4.267 1.00 46.85 C
ATOM 16 N7 G A 12 7.357 -17.270 3.917 1.00 47.06 N
ATOM 17 C5 G A 12 6.504 -16.183 3.804 1.00 46.52 C
ATOM 18 C6 G A 12 6.770 -14.819 3.451 1.00 46.19 C
ATOM 19 O6 G A 12 7.855 -14.280 3.164 1.00 45.33 O
ATOM 20 N1 G A 12 5.604 -14.047 3.447 1.00 44.71 N
ATOM 21 C2 G A 12 4.359 -14.540 3.759 1.00 44.96 C
ATOM 22 N2 G A 12 3.374 -13.642 3.711 1.00 43.40 N
ATOM 23 N3 G A 12 4.093 -15.814 4.105 1.00 45.78 N
ATOM 24 C4 G A 12 5.219 -16.578 4.104 1.00 46.63 C
ATOM 25 P A A 13 2.968 -20.669 0.424 1.00 52.70 P
ATOM 26 OP1 A A 13 1.931 -21.617 -0.062 1.00 52.73 O
ATOM 27 OP2 A A 13 4.442 -20.945 0.268 1.00 51.07 O
ATOM 28 O5' A A 13 2.558 -19.298 -0.257 1.00 47.43 O
TER
ATOM 1 O3' G B 10 8.452 -19.977 11.918 1.00 64.63 O
ATOM 2 P A B 11 8.682 -21.479 11.363 1.00 64.09 P
ATOM 3 OP1 A B 11 8.121 -22.355 12.424 1.00 63.57 O
ATOM 4 OP2 A B 11 10.106 -21.624 10.905 1.00 62.72 O
ATOM 5 O5' A B 11 7.693 -21.553 10.088 1.00 60.81 O
ATOM 6 C5' A B 11 7.006 -22.718 9.610 1.00 57.80 C
ATOM 7 C4' A B 11 5.541 -22.435 9.232 1.00 56.36 C
ATOM 8 O4' A B 11 4.936 -21.263 9.848 1.00 55.72 O
ATOM 9 C3' A B 11 5.330 -22.124 7.777 1.00 55.05 C
ATOM 10 O3' A B 11 5.432 -23.327 7.124 1.00 55.09 O
ATOM 11 C2' A B 11 3.925 -21.535 7.721 1.00 55.05 C
ATOM 12 O2' A B 11 2.889 -22.477 7.526 1.00 55.95 O
ATOM 13 C1' A B 11 3.796 -20.879 9.093 1.00 54.84 C
ATOM 14 N9 A B 11 3.752 -19.424 8.973 1.00 54.49 N
ATOM 15 C8 A B 11 2.731 -18.565 9.305 1.00 54.46 C
ATOM 16 N7 A B 11 2.998 -17.294 9.061 1.00 54.50 N
ATOM 17 C5 A B 11 4.283 -17.321 8.530 1.00 54.64 C
ATOM 18 C6 A B 11 5.152 -16.305 8.065 1.00 54.22 C
ATOM 19 N6 A B 11 4.861 -15.001 8.050 1.00 52.72 N
ATOM 20 N1 A B 11 6.358 -16.699 7.602 1.00 55.23 N
ATOM 21 C2 A B 11 6.686 -18.007 7.600 1.00 54.96 C
ATOM 22 N3 A B 11 5.963 -19.049 8.010 1.00 54.83 N
ATOM 23 C4 A B 11 4.761 -18.630 8.469 1.00 54.79 C
ATOM 24 P G B 12 6.220 -23.373 5.737 1.00 57.57 P
ATOM 25 OP1 G B 12 6.788 -24.757 5.673 1.00 56.80 O
ATOM 26 OP2 G B 12 7.136 -22.188 5.724 1.00 57.10 O
ATOM 27 O5' G B 12 5.038 -23.190 4.616 1.00 55.70 O
TER
ATOM 2 P G A 12 6.220 -23.373 5.737 1.00 57.57 P
ATOM 3 OP1 G A 12 6.788 -24.757 5.673 1.00 56.80 O
ATOM 4 OP2 G A 12 7.136 -22.188 5.724 1.00 57.10 O
ATOM 5 O5' G A 12 5.038 -23.190 4.616 1.00 55.70 O
ATOM 6 C5' G A 12 4.936 -22.148 3.581 1.00 53.30 C
ATOM 7 C4' G A 12 3.985 -21.016 3.983 1.00 51.88 C
ATOM 8 O4' G A 12 4.652 -20.140 4.929 1.00 51.79 O
ATOM 9 C3' G A 12 3.596 -20.001 2.910 1.00 51.93 C
ATOM 10 O3' G A 12 2.605 -20.444 1.986 1.00 52.41 O
ATOM 11 C2' G A 12 3.107 -18.795 3.725 1.00 51.60 C
ATOM 12 O2' G A 12 1.813 -18.872 4.320 1.00 51.84 O
ATOM 13 C1' G A 12 4.205 -18.786 4.778 1.00 50.77 C
ATOM 14 N9 G A 12 5.305 -17.917 4.399 1.00 47.74 N
ATOM 15 C8 G A 12 6.612 -18.274 4.267 1.00 46.85 C
ATOM 16 N7 G A 12 7.357 -17.270 3.917 1.00 47.06 N
ATOM 17 C5 G A 12 6.504 -16.183 3.804 1.00 46.52 C
ATOM 18 C6 G A 12 6.770 -14.819 3.451 1.00 46.19 C
ATOM 19 O6 G A 12 7.855 -14.280 3.164 1.00 45.33 O
ATOM 20 N1 G A 12 5.604 -14.047 3.447 1.00 44.71 N
ATOM 21 C2 G A 12 4.359 -14.540 3.759 1.00 44.96 C
ATOM 22 N2 G A 12 3.374 -13.642 3.711 1.00 43.40 N
ATOM 23 N3 G A 12 4.093 -15.814 4.105 1.00 45.78 N
ATOM 24 C4 G A 12 5.219 -16.578 4.104 1.00 46.63 C
ATOM 25 P A A 13 2.968 -20.669 0.424 1.00 52.70 P
ATOM 26 OP1 A A 13 1.931 -21.617 -0.062 1.00 52.73 O
ATOM 27 OP2 A A 13 4.442 -20.945 0.268 1.00 51.07 O
ATOM 28 O5' A A 13 2.558 -19.298 -0.257 1.00 47.43 O
TER
ATOM 1 O3' G B 10 8.452 -19.977 11.918 1.00 64.63 O
ATOM 2 P A B 11 8.682 -21.479 11.363 1.00 64.09 P
ATOM 3 OP1 A B 11 8.121 -22.355 12.424 1.00 63.57 O
ATOM 4 OP2 A B 11 10.106 -21.624 10.905 1.00 62.72 O
ATOM 5 O5' A B 11 7.693 -21.553 10.088 1.00 60.81 O
ATOM 6 C5' A B 11 7.006 -22.718 9.610 1.00 57.80 C
ATOM 7 C4' A B 11 5.541 -22.435 9.232 1.00 56.36 C
ATOM 8 O4' A B 11 4.936 -21.263 9.848 1.00 55.72 O
ATOM 9 C3' A B 11 5.330 -22.124 7.777 1.00 55.05 C
ATOM 10 O3' A B 11 5.432 -23.327 7.124 1.00 55.09 O
ATOM 11 C2' A B 11 3.925 -21.535 7.721 1.00 55.05 C
ATOM 12 O2' A B 11 2.889 -22.477 7.526 1.00 55.95 O
ATOM 13 C1' A B 11 3.796 -20.879 9.093 1.00 54.84 C
ATOM 14 N9 A B 11 3.752 -19.424 8.973 1.00 54.49 N
ATOM 15 C8 A B 11 2.731 -18.565 9.305 1.00 54.46 C
ATOM 16 N7 A B 11 2.998 -17.294 9.061 1.00 54.50 N
ATOM 17 C5 A B 11 4.283 -17.321 8.530 1.00 54.64 C
ATOM 18 C6 A B 11 5.152 -16.305 8.065 1.00 54.22 C
ATOM 19 N6 A B 11 4.861 -15.001 8.050 1.00 52.72 N
ATOM 20 N1 A B 11 6.358 -16.699 7.602 1.00 55.23 N
ATOM 21 C2 A B 11 6.686 -18.007 7.600 1.00 54.96 C
ATOM 22 N3 A B 11 5.963 -19.049 8.010 1.00 54.83 N
ATOM 23 C4 A B 11 4.761 -18.630 8.469 1.00 54.79 C
ATOM 24 P G B 12 6.220 -23.373 5.737 1.00 57.57 P
ATOM 25 OP1 G B 12 6.788 -24.757 5.673 1.00 56.80 O
ATOM 26 OP2 G B 12 7.136 -22.188 5.724 1.00 57.10 O
ATOM 27 O5' G B 12 5.038 -23.190 4.616 1.00 55.70 O
TER
Atoms:
OP1: (6.788,-24.757,5.673)
OP2: (7.136,-22.188,5.724)
C3': (3.596,-20.001,2.910)
C1': (4.205,-18.786,4.778)
C5': (4.936,-22.148,3.581)
O6: (7.855,-14.280,3.164)
O4': (4.652,-20.140,4.929)
C8: (6.612,-18.274,4.267)
C2: (4.359,-14.540,3.759)
C6: (6.770,-14.819,3.451)
C5: (6.504,-16.183,3.804)
C4: (5.219,-16.578,4.104)
P: (6.220,-23.373,5.737)
C4': (3.985,-21.016,3.983)
C2': (3.107,-18.795,3.725)
O2': (1.813,-18.872,4.320)
N1: (5.604,-14.047,3.447)
N2: (3.374,-13.642,3.711)
N3: (4.093,-15.814,4.105)
N7: (7.357,-17.270,3.917)
N9: (5.305,-17.917,4.399)
O5': (5.038,-23.190,4.616)
O3': (2.605,-20.444,1.986)
OP2: (7.136,-22.188,5.724)
C3': (3.596,-20.001,2.910)
C1': (4.205,-18.786,4.778)
C5': (4.936,-22.148,3.581)
O6: (7.855,-14.280,3.164)
O4': (4.652,-20.140,4.929)
C8: (6.612,-18.274,4.267)
C2: (4.359,-14.540,3.759)
C6: (6.770,-14.819,3.451)
C5: (6.504,-16.183,3.804)
C4: (5.219,-16.578,4.104)
P: (6.220,-23.373,5.737)
C4': (3.985,-21.016,3.983)
C2': (3.107,-18.795,3.725)
O2': (1.813,-18.872,4.320)
N1: (5.604,-14.047,3.447)
N2: (3.374,-13.642,3.711)
N3: (4.093,-15.814,4.105)
N7: (7.357,-17.270,3.917)
N9: (5.305,-17.917,4.399)
O5': (5.038,-23.190,4.616)
O3': (2.605,-20.444,1.986)
OP1: (8.121,-22.355,12.424)
OP2: (10.106,-21.624,10.905)
C3': (5.330,-22.124,7.777)
C1': (3.796,-20.879,9.093)
C5': (7.006,-22.718,9.610)
O4': (4.936,-21.263,9.848)
C8: (2.731,-18.565,9.305)
O2': (2.889,-22.477,7.526)
C6: (5.152,-16.305,8.065)
C5: (4.283,-17.321,8.530)
C4: (4.761,-18.630,8.469)
P: (8.682,-21.479,11.363)
C4': (5.541,-22.435,9.232)
C2': (3.925,-21.535,7.721)
C2: (6.686,-18.007,7.600)
N1: (6.358,-16.699,7.602)
N3: (5.963,-19.049,8.010)
N6: (4.861,-15.001,8.050)
N7: (2.998,-17.294,9.061)
N9: (3.752,-19.424,8.973)
O5': (7.693,-21.553,10.088)
O3': (5.432,-23.327,7.124)
OP2: (10.106,-21.624,10.905)
C3': (5.330,-22.124,7.777)
C1': (3.796,-20.879,9.093)
C5': (7.006,-22.718,9.610)
O4': (4.936,-21.263,9.848)
C8: (2.731,-18.565,9.305)
O2': (2.889,-22.477,7.526)
C6: (5.152,-16.305,8.065)
C5: (4.283,-17.321,8.530)
C4: (4.761,-18.630,8.469)
P: (8.682,-21.479,11.363)
C4': (5.541,-22.435,9.232)
C2': (3.925,-21.535,7.721)
C2: (6.686,-18.007,7.600)
N1: (6.358,-16.699,7.602)
N3: (5.963,-19.049,8.010)
N6: (4.861,-15.001,8.050)
N7: (2.998,-17.294,9.061)
N9: (3.752,-19.424,8.973)
O5': (7.693,-21.553,10.088)
O3': (5.432,-23.327,7.124)
Image (generated by PyMOL):