Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A46:A60
Extra
PDB:
ATOM 1 O3' U A 45 55.483 165.457 36.124 1.00 51.51 O
ATOM 2 P G A 46 54.497 166.450 36.917 1.00 52.73 P
ATOM 3 OP1 G A 46 54.135 167.585 36.030 1.00 53.52 O
ATOM 4 OP2 G A 46 55.078 166.719 38.244 1.00 53.51 O
ATOM 5 O5' G A 46 53.169 165.597 37.088 1.00 52.22 O
ATOM 6 C5' G A 46 52.434 165.176 35.935 1.00 52.00 C
ATOM 7 C4' G A 46 50.971 165.224 36.216 1.00 53.16 C
ATOM 8 O4' G A 46 50.628 164.135 37.104 1.00 53.98 O
ATOM 9 C3' G A 46 50.465 166.500 36.875 1.00 53.39 C
ATOM 10 O3' G A 46 49.200 166.789 36.317 1.00 51.94 O
ATOM 11 C2' G A 46 50.287 166.079 38.331 1.00 54.19 C
ATOM 12 O2' G A 46 49.271 166.818 38.974 1.00 54.98 O
ATOM 13 C1' G A 46 49.836 164.632 38.153 1.00 55.06 C
ATOM 14 N9 G A 46 50.005 163.740 39.289 1.00 56.01 N
ATOM 15 C8 G A 46 50.787 163.924 40.399 1.00 55.75 C
ATOM 16 N7 G A 46 50.711 162.937 41.245 1.00 55.77 N
ATOM 17 C5 G A 46 49.823 162.049 40.656 1.00 56.22 C
ATOM 18 C6 G A 46 49.333 160.805 41.108 1.00 56.02 C
ATOM 19 O6 G A 46 49.564 160.227 42.173 1.00 55.55 O
ATOM 20 N1 G A 46 48.473 160.229 40.180 1.00 56.24 N
ATOM 21 C2 G A 46 48.113 160.788 38.980 1.00 56.11 C
ATOM 22 N2 G A 46 47.287 160.070 38.211 1.00 56.07 N
ATOM 23 N3 G A 46 48.537 161.961 38.565 1.00 56.17 N
ATOM 24 C4 G A 46 49.389 162.528 39.443 1.00 56.36 C
ATOM 25 P C A 47 48.965 168.192 35.619 1.00 49.77 P
ATOM 26 OP1 C A 47 47.655 168.039 34.949 1.00 49.60 O
ATOM 27 OP2 C A 47 50.178 168.523 34.814 1.00 48.39 O
ATOM 28 O5' C A 47 48.843 169.200 36.846 1.00 50.67 O
TER
ATOM 1 O3' A B 59 53.702 160.952 31.461 1.00 52.28 O
ATOM 2 P A B 60 52.691 161.268 32.687 1.00 53.28 P
ATOM 3 OP1 A B 60 52.027 162.574 32.450 1.00 53.45 O
ATOM 4 OP2 A B 60 53.391 161.037 33.970 1.00 53.17 O
ATOM 5 O5' A B 60 51.552 160.166 32.566 1.00 54.30 O
ATOM 6 C5' A B 60 50.173 160.507 32.782 1.00 55.06 C
ATOM 7 C4' A B 60 49.317 159.263 32.737 1.00 55.23 C
ATOM 8 O4' A B 60 49.806 158.328 33.715 1.00 55.20 O
ATOM 9 C3' A B 60 47.829 159.417 33.008 1.00 56.32 C
ATOM 10 O3' A B 60 47.152 158.393 32.303 1.00 58.23 O
ATOM 11 C2' A B 60 47.709 159.098 34.490 1.00 56.75 C
ATOM 12 O2' A B 60 46.438 158.522 34.765 1.00 57.19 O
ATOM 13 C1' A B 60 48.806 158.049 34.666 1.00 56.21 C
ATOM 14 N9 A B 60 49.460 158.042 35.977 1.00 57.74 N
ATOM 15 C8 A B 60 49.564 156.978 36.831 1.00 57.76 C
ATOM 16 N7 A B 60 50.262 157.230 37.909 1.00 58.36 N
ATOM 17 C5 A B 60 50.628 158.559 37.771 1.00 58.31 C
ATOM 18 C6 A B 60 51.390 159.414 38.584 1.00 57.48 C
ATOM 19 N6 A B 60 51.907 159.055 39.760 1.00 57.52 N
ATOM 20 N1 A B 60 51.599 160.667 38.149 1.00 57.49 N
ATOM 21 C2 A B 60 51.061 161.034 36.981 1.00 58.92 C
ATOM 22 N3 A B 60 50.313 160.325 36.130 1.00 59.03 N
ATOM 23 C4 A B 60 50.133 159.078 36.589 1.00 58.34 C
ATOM 24 P G B 61 46.673 158.645 30.791 1.00 60.44 P
ATOM 25 OP1 G B 61 46.146 160.042 30.627 1.00 57.78 O
ATOM 26 OP2 G B 61 45.824 157.480 30.423 1.00 59.54 O
ATOM 27 O5' G B 61 48.022 158.535 29.960 1.00 57.17 O
TER
ATOM 2 P G A 46 54.497 166.450 36.917 1.00 52.73 P
ATOM 3 OP1 G A 46 54.135 167.585 36.030 1.00 53.52 O
ATOM 4 OP2 G A 46 55.078 166.719 38.244 1.00 53.51 O
ATOM 5 O5' G A 46 53.169 165.597 37.088 1.00 52.22 O
ATOM 6 C5' G A 46 52.434 165.176 35.935 1.00 52.00 C
ATOM 7 C4' G A 46 50.971 165.224 36.216 1.00 53.16 C
ATOM 8 O4' G A 46 50.628 164.135 37.104 1.00 53.98 O
ATOM 9 C3' G A 46 50.465 166.500 36.875 1.00 53.39 C
ATOM 10 O3' G A 46 49.200 166.789 36.317 1.00 51.94 O
ATOM 11 C2' G A 46 50.287 166.079 38.331 1.00 54.19 C
ATOM 12 O2' G A 46 49.271 166.818 38.974 1.00 54.98 O
ATOM 13 C1' G A 46 49.836 164.632 38.153 1.00 55.06 C
ATOM 14 N9 G A 46 50.005 163.740 39.289 1.00 56.01 N
ATOM 15 C8 G A 46 50.787 163.924 40.399 1.00 55.75 C
ATOM 16 N7 G A 46 50.711 162.937 41.245 1.00 55.77 N
ATOM 17 C5 G A 46 49.823 162.049 40.656 1.00 56.22 C
ATOM 18 C6 G A 46 49.333 160.805 41.108 1.00 56.02 C
ATOM 19 O6 G A 46 49.564 160.227 42.173 1.00 55.55 O
ATOM 20 N1 G A 46 48.473 160.229 40.180 1.00 56.24 N
ATOM 21 C2 G A 46 48.113 160.788 38.980 1.00 56.11 C
ATOM 22 N2 G A 46 47.287 160.070 38.211 1.00 56.07 N
ATOM 23 N3 G A 46 48.537 161.961 38.565 1.00 56.17 N
ATOM 24 C4 G A 46 49.389 162.528 39.443 1.00 56.36 C
ATOM 25 P C A 47 48.965 168.192 35.619 1.00 49.77 P
ATOM 26 OP1 C A 47 47.655 168.039 34.949 1.00 49.60 O
ATOM 27 OP2 C A 47 50.178 168.523 34.814 1.00 48.39 O
ATOM 28 O5' C A 47 48.843 169.200 36.846 1.00 50.67 O
TER
ATOM 1 O3' A B 59 53.702 160.952 31.461 1.00 52.28 O
ATOM 2 P A B 60 52.691 161.268 32.687 1.00 53.28 P
ATOM 3 OP1 A B 60 52.027 162.574 32.450 1.00 53.45 O
ATOM 4 OP2 A B 60 53.391 161.037 33.970 1.00 53.17 O
ATOM 5 O5' A B 60 51.552 160.166 32.566 1.00 54.30 O
ATOM 6 C5' A B 60 50.173 160.507 32.782 1.00 55.06 C
ATOM 7 C4' A B 60 49.317 159.263 32.737 1.00 55.23 C
ATOM 8 O4' A B 60 49.806 158.328 33.715 1.00 55.20 O
ATOM 9 C3' A B 60 47.829 159.417 33.008 1.00 56.32 C
ATOM 10 O3' A B 60 47.152 158.393 32.303 1.00 58.23 O
ATOM 11 C2' A B 60 47.709 159.098 34.490 1.00 56.75 C
ATOM 12 O2' A B 60 46.438 158.522 34.765 1.00 57.19 O
ATOM 13 C1' A B 60 48.806 158.049 34.666 1.00 56.21 C
ATOM 14 N9 A B 60 49.460 158.042 35.977 1.00 57.74 N
ATOM 15 C8 A B 60 49.564 156.978 36.831 1.00 57.76 C
ATOM 16 N7 A B 60 50.262 157.230 37.909 1.00 58.36 N
ATOM 17 C5 A B 60 50.628 158.559 37.771 1.00 58.31 C
ATOM 18 C6 A B 60 51.390 159.414 38.584 1.00 57.48 C
ATOM 19 N6 A B 60 51.907 159.055 39.760 1.00 57.52 N
ATOM 20 N1 A B 60 51.599 160.667 38.149 1.00 57.49 N
ATOM 21 C2 A B 60 51.061 161.034 36.981 1.00 58.92 C
ATOM 22 N3 A B 60 50.313 160.325 36.130 1.00 59.03 N
ATOM 23 C4 A B 60 50.133 159.078 36.589 1.00 58.34 C
ATOM 24 P G B 61 46.673 158.645 30.791 1.00 60.44 P
ATOM 25 OP1 G B 61 46.146 160.042 30.627 1.00 57.78 O
ATOM 26 OP2 G B 61 45.824 157.480 30.423 1.00 59.54 O
ATOM 27 O5' G B 61 48.022 158.535 29.960 1.00 57.17 O
TER
Atoms:
OP1: (54.135,167.585,36.030)
OP2: (55.078,166.719,38.244)
C3': (50.465,166.500,36.875)
C1': (49.836,164.632,38.153)
C5': (52.434,165.176,35.935)
O6: (49.564,160.227,42.173)
O4': (50.628,164.135,37.104)
C8: (50.787,163.924,40.399)
C2: (48.113,160.788,38.980)
C6: (49.333,160.805,41.108)
C5: (49.823,162.049,40.656)
C4: (49.389,162.528,39.443)
P: (54.497,166.450,36.917)
C4': (50.971,165.224,36.216)
C2': (50.287,166.079,38.331)
O2': (49.271,166.818,38.974)
N1: (48.473,160.229,40.180)
N2: (47.287,160.070,38.211)
N3: (48.537,161.961,38.565)
N7: (50.711,162.937,41.245)
N9: (50.005,163.740,39.289)
O5': (53.169,165.597,37.088)
O3': (49.200,166.789,36.317)
OP2: (55.078,166.719,38.244)
C3': (50.465,166.500,36.875)
C1': (49.836,164.632,38.153)
C5': (52.434,165.176,35.935)
O6: (49.564,160.227,42.173)
O4': (50.628,164.135,37.104)
C8: (50.787,163.924,40.399)
C2: (48.113,160.788,38.980)
C6: (49.333,160.805,41.108)
C5: (49.823,162.049,40.656)
C4: (49.389,162.528,39.443)
P: (54.497,166.450,36.917)
C4': (50.971,165.224,36.216)
C2': (50.287,166.079,38.331)
O2': (49.271,166.818,38.974)
N1: (48.473,160.229,40.180)
N2: (47.287,160.070,38.211)
N3: (48.537,161.961,38.565)
N7: (50.711,162.937,41.245)
N9: (50.005,163.740,39.289)
O5': (53.169,165.597,37.088)
O3': (49.200,166.789,36.317)
OP1: (52.027,162.574,32.450)
OP2: (53.391,161.037,33.970)
C3': (47.829,159.417,33.008)
C1': (48.806,158.049,34.666)
C5': (50.173,160.507,32.782)
O4': (49.806,158.328,33.715)
C8: (49.564,156.978,36.831)
O2': (46.438,158.522,34.765)
C6: (51.390,159.414,38.584)
C5: (50.628,158.559,37.771)
C4: (50.133,159.078,36.589)
P: (52.691,161.268,32.687)
C4': (49.317,159.263,32.737)
C2': (47.709,159.098,34.490)
C2: (51.061,161.034,36.981)
N1: (51.599,160.667,38.149)
N3: (50.313,160.325,36.130)
N6: (51.907,159.055,39.760)
N7: (50.262,157.230,37.909)
N9: (49.460,158.042,35.977)
O5': (51.552,160.166,32.566)
O3': (47.152,158.393,32.303)
OP2: (53.391,161.037,33.970)
C3': (47.829,159.417,33.008)
C1': (48.806,158.049,34.666)
C5': (50.173,160.507,32.782)
O4': (49.806,158.328,33.715)
C8: (49.564,156.978,36.831)
O2': (46.438,158.522,34.765)
C6: (51.390,159.414,38.584)
C5: (50.628,158.559,37.771)
C4: (50.133,159.078,36.589)
P: (52.691,161.268,32.687)
C4': (49.317,159.263,32.737)
C2': (47.709,159.098,34.490)
C2: (51.061,161.034,36.981)
N1: (51.599,160.667,38.149)
N3: (50.313,160.325,36.130)
N6: (51.907,159.055,39.760)
N7: (50.262,157.230,37.909)
N9: (49.460,158.042,35.977)
O5': (51.552,160.166,32.566)
O3': (47.152,158.393,32.303)
Image (generated by PyMOL):