Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B57:B56
Extra
PDB:
ATOM 1 O3' A A 56 68.535 21.150 112.516 1.00 73.77 O
ATOM 2 P G A 57 67.047 21.656 112.158 1.00 72.98 P
ATOM 3 OP1 G A 57 66.821 22.930 112.883 1.00 72.96 O
ATOM 4 OP2 G A 57 66.129 20.510 112.385 1.00 73.58 O
ATOM 5 O5' G A 57 67.054 21.949 110.592 1.00 71.31 O
ATOM 6 C5' G A 57 67.925 22.930 110.010 1.00 69.98 C
ATOM 7 C4' G A 57 67.976 22.736 108.516 1.00 69.53 C
ATOM 8 O4' G A 57 68.463 21.391 108.246 1.00 69.44 O
ATOM 9 C3' G A 57 66.634 22.789 107.795 1.00 69.76 C
ATOM 10 O3' G A 57 66.184 24.106 107.477 1.00 69.98 O
ATOM 11 C2' G A 57 66.918 21.982 106.538 1.00 69.74 C
ATOM 12 O2' G A 57 67.608 22.732 105.565 1.00 68.45 O
ATOM 13 C1' G A 57 67.816 20.871 107.091 1.00 69.61 C
ATOM 14 N9 G A 57 67.060 19.677 107.467 1.00 69.34 N
ATOM 15 C8 G A 57 66.914 19.146 108.725 1.00 70.03 C
ATOM 16 N7 G A 57 66.179 18.068 108.745 1.00 70.56 N
ATOM 17 C5 G A 57 65.817 17.874 107.418 1.00 70.21 C
ATOM 18 C6 G A 57 65.027 16.856 106.813 1.00 70.69 C
ATOM 19 O6 G A 57 64.465 15.891 107.348 1.00 71.61 O
ATOM 20 N1 G A 57 64.922 17.042 105.439 1.00 69.60 N
ATOM 21 C2 G A 57 65.496 18.068 104.733 1.00 68.83 C
ATOM 22 N2 G A 57 65.288 18.062 103.404 1.00 69.13 N
ATOM 23 N3 G A 57 66.223 19.022 105.283 1.00 68.75 N
ATOM 24 C4 G A 57 66.348 18.861 106.618 1.00 69.08 C
ATOM 25 P C A 58 64.674 24.542 107.833 1.00 69.96 P
ATOM 26 OP1 C A 58 64.418 25.891 107.279 1.00 70.45 O
ATOM 27 OP2 C A 58 64.542 24.314 109.295 1.00 71.97 O
ATOM 28 O5' C A 58 63.765 23.524 107.014 1.00 68.54 O
TER
ATOM 1 O3' A B 55 69.084 16.500 116.006 1.00 80.67 O
ATOM 2 P A B 56 67.823 17.393 115.553 1.00 79.66 P
ATOM 3 OP1 A B 56 67.425 18.132 116.782 1.00 79.52 O
ATOM 4 OP2 A B 56 66.832 16.548 114.845 1.00 79.14 O
ATOM 5 O5' A B 56 68.411 18.429 114.498 1.00 78.66 O
ATOM 6 C5' A B 56 69.086 17.968 113.328 1.00 77.53 C
ATOM 7 C4' A B 56 69.880 19.084 112.697 1.00 76.48 C
ATOM 8 O4' A B 56 70.856 18.483 111.815 1.00 77.01 O
ATOM 9 C3' A B 56 69.103 20.052 111.809 1.00 75.57 C
ATOM 10 O3' A B 56 68.535 21.150 112.516 1.00 73.77 O
ATOM 11 C2' A B 56 70.172 20.554 110.856 1.00 75.44 C
ATOM 12 O2' A B 56 70.934 21.595 111.415 1.00 75.59 O
ATOM 13 C1' A B 56 71.025 19.299 110.668 1.00 75.87 C
ATOM 14 N9 A B 56 70.604 18.533 109.500 1.00 74.76 N
ATOM 15 C8 A B 56 70.936 18.760 108.189 1.00 74.70 C
ATOM 16 N7 A B 56 70.410 17.901 107.354 1.00 72.69 N
ATOM 17 C5 A B 56 69.683 17.053 108.171 1.00 73.55 C
ATOM 18 C6 A B 56 68.902 15.933 107.895 1.00 74.20 C
ATOM 19 N6 A B 56 68.731 15.455 106.664 1.00 74.16 N
ATOM 20 N1 A B 56 68.301 15.310 108.938 1.00 74.81 N
ATOM 21 C2 A B 56 68.493 15.801 110.173 1.00 74.34 C
ATOM 22 N3 A B 56 69.212 16.845 110.555 1.00 72.83 N
ATOM 23 C4 A B 56 69.788 17.433 109.494 1.00 73.39 C
ATOM 24 P G B 57 67.047 21.656 112.158 1.00 72.98 P
ATOM 25 OP1 G B 57 66.821 22.930 112.883 1.00 72.96 O
ATOM 26 OP2 G B 57 66.129 20.510 112.385 1.00 73.58 O
ATOM 27 O5' G B 57 67.054 21.949 110.592 1.00 71.31 O
TER
ATOM 2 P G A 57 67.047 21.656 112.158 1.00 72.98 P
ATOM 3 OP1 G A 57 66.821 22.930 112.883 1.00 72.96 O
ATOM 4 OP2 G A 57 66.129 20.510 112.385 1.00 73.58 O
ATOM 5 O5' G A 57 67.054 21.949 110.592 1.00 71.31 O
ATOM 6 C5' G A 57 67.925 22.930 110.010 1.00 69.98 C
ATOM 7 C4' G A 57 67.976 22.736 108.516 1.00 69.53 C
ATOM 8 O4' G A 57 68.463 21.391 108.246 1.00 69.44 O
ATOM 9 C3' G A 57 66.634 22.789 107.795 1.00 69.76 C
ATOM 10 O3' G A 57 66.184 24.106 107.477 1.00 69.98 O
ATOM 11 C2' G A 57 66.918 21.982 106.538 1.00 69.74 C
ATOM 12 O2' G A 57 67.608 22.732 105.565 1.00 68.45 O
ATOM 13 C1' G A 57 67.816 20.871 107.091 1.00 69.61 C
ATOM 14 N9 G A 57 67.060 19.677 107.467 1.00 69.34 N
ATOM 15 C8 G A 57 66.914 19.146 108.725 1.00 70.03 C
ATOM 16 N7 G A 57 66.179 18.068 108.745 1.00 70.56 N
ATOM 17 C5 G A 57 65.817 17.874 107.418 1.00 70.21 C
ATOM 18 C6 G A 57 65.027 16.856 106.813 1.00 70.69 C
ATOM 19 O6 G A 57 64.465 15.891 107.348 1.00 71.61 O
ATOM 20 N1 G A 57 64.922 17.042 105.439 1.00 69.60 N
ATOM 21 C2 G A 57 65.496 18.068 104.733 1.00 68.83 C
ATOM 22 N2 G A 57 65.288 18.062 103.404 1.00 69.13 N
ATOM 23 N3 G A 57 66.223 19.022 105.283 1.00 68.75 N
ATOM 24 C4 G A 57 66.348 18.861 106.618 1.00 69.08 C
ATOM 25 P C A 58 64.674 24.542 107.833 1.00 69.96 P
ATOM 26 OP1 C A 58 64.418 25.891 107.279 1.00 70.45 O
ATOM 27 OP2 C A 58 64.542 24.314 109.295 1.00 71.97 O
ATOM 28 O5' C A 58 63.765 23.524 107.014 1.00 68.54 O
TER
ATOM 1 O3' A B 55 69.084 16.500 116.006 1.00 80.67 O
ATOM 2 P A B 56 67.823 17.393 115.553 1.00 79.66 P
ATOM 3 OP1 A B 56 67.425 18.132 116.782 1.00 79.52 O
ATOM 4 OP2 A B 56 66.832 16.548 114.845 1.00 79.14 O
ATOM 5 O5' A B 56 68.411 18.429 114.498 1.00 78.66 O
ATOM 6 C5' A B 56 69.086 17.968 113.328 1.00 77.53 C
ATOM 7 C4' A B 56 69.880 19.084 112.697 1.00 76.48 C
ATOM 8 O4' A B 56 70.856 18.483 111.815 1.00 77.01 O
ATOM 9 C3' A B 56 69.103 20.052 111.809 1.00 75.57 C
ATOM 10 O3' A B 56 68.535 21.150 112.516 1.00 73.77 O
ATOM 11 C2' A B 56 70.172 20.554 110.856 1.00 75.44 C
ATOM 12 O2' A B 56 70.934 21.595 111.415 1.00 75.59 O
ATOM 13 C1' A B 56 71.025 19.299 110.668 1.00 75.87 C
ATOM 14 N9 A B 56 70.604 18.533 109.500 1.00 74.76 N
ATOM 15 C8 A B 56 70.936 18.760 108.189 1.00 74.70 C
ATOM 16 N7 A B 56 70.410 17.901 107.354 1.00 72.69 N
ATOM 17 C5 A B 56 69.683 17.053 108.171 1.00 73.55 C
ATOM 18 C6 A B 56 68.902 15.933 107.895 1.00 74.20 C
ATOM 19 N6 A B 56 68.731 15.455 106.664 1.00 74.16 N
ATOM 20 N1 A B 56 68.301 15.310 108.938 1.00 74.81 N
ATOM 21 C2 A B 56 68.493 15.801 110.173 1.00 74.34 C
ATOM 22 N3 A B 56 69.212 16.845 110.555 1.00 72.83 N
ATOM 23 C4 A B 56 69.788 17.433 109.494 1.00 73.39 C
ATOM 24 P G B 57 67.047 21.656 112.158 1.00 72.98 P
ATOM 25 OP1 G B 57 66.821 22.930 112.883 1.00 72.96 O
ATOM 26 OP2 G B 57 66.129 20.510 112.385 1.00 73.58 O
ATOM 27 O5' G B 57 67.054 21.949 110.592 1.00 71.31 O
TER
Atoms:
OP1: (66.821,22.930,112.883)
OP2: (66.129,20.510,112.385)
C3': (66.634,22.789,107.795)
C1': (67.816,20.871,107.091)
C5': (67.925,22.930,110.010)
O6: (64.465,15.891,107.348)
O4': (68.463,21.391,108.246)
C8: (66.914,19.146,108.725)
C2: (65.496,18.068,104.733)
C6: (65.027,16.856,106.813)
C5: (65.817,17.874,107.418)
C4: (66.348,18.861,106.618)
P: (67.047,21.656,112.158)
C4': (67.976,22.736,108.516)
C2': (66.918,21.982,106.538)
O2': (67.608,22.732,105.565)
N1: (64.922,17.042,105.439)
N2: (65.288,18.062,103.404)
N3: (66.223,19.022,105.283)
N7: (66.179,18.068,108.745)
N9: (67.060,19.677,107.467)
O5': (67.054,21.949,110.592)
O3': (66.184,24.106,107.477)
OP2: (66.129,20.510,112.385)
C3': (66.634,22.789,107.795)
C1': (67.816,20.871,107.091)
C5': (67.925,22.930,110.010)
O6: (64.465,15.891,107.348)
O4': (68.463,21.391,108.246)
C8: (66.914,19.146,108.725)
C2: (65.496,18.068,104.733)
C6: (65.027,16.856,106.813)
C5: (65.817,17.874,107.418)
C4: (66.348,18.861,106.618)
P: (67.047,21.656,112.158)
C4': (67.976,22.736,108.516)
C2': (66.918,21.982,106.538)
O2': (67.608,22.732,105.565)
N1: (64.922,17.042,105.439)
N2: (65.288,18.062,103.404)
N3: (66.223,19.022,105.283)
N7: (66.179,18.068,108.745)
N9: (67.060,19.677,107.467)
O5': (67.054,21.949,110.592)
O3': (66.184,24.106,107.477)
OP1: (67.425,18.132,116.782)
OP2: (66.832,16.548,114.845)
C3': (69.103,20.052,111.809)
C1': (71.025,19.299,110.668)
C5': (69.086,17.968,113.328)
O4': (70.856,18.483,111.815)
C8: (70.936,18.760,108.189)
O2': (70.934,21.595,111.415)
C6: (68.902,15.933,107.895)
C5: (69.683,17.053,108.171)
C4: (69.788,17.433,109.494)
P: (67.823,17.393,115.553)
C4': (69.880,19.084,112.697)
C2': (70.172,20.554,110.856)
C2: (68.493,15.801,110.173)
N1: (68.301,15.310,108.938)
N3: (69.212,16.845,110.555)
N6: (68.731,15.455,106.664)
N7: (70.410,17.901,107.354)
N9: (70.604,18.533,109.500)
O5': (68.411,18.429,114.498)
O3': (68.535,21.150,112.516)
OP2: (66.832,16.548,114.845)
C3': (69.103,20.052,111.809)
C1': (71.025,19.299,110.668)
C5': (69.086,17.968,113.328)
O4': (70.856,18.483,111.815)
C8: (70.936,18.760,108.189)
O2': (70.934,21.595,111.415)
C6: (68.902,15.933,107.895)
C5: (69.683,17.053,108.171)
C4: (69.788,17.433,109.494)
P: (67.823,17.393,115.553)
C4': (69.880,19.084,112.697)
C2': (70.172,20.554,110.856)
C2: (68.493,15.801,110.173)
N1: (68.301,15.310,108.938)
N3: (69.212,16.845,110.555)
N6: (68.731,15.455,106.664)
N7: (70.410,17.901,107.354)
N9: (70.604,18.533,109.500)
O5': (68.411,18.429,114.498)
O3': (68.535,21.150,112.516)
Image (generated by PyMOL):