Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02261:02221
Extra
PDB:
ATOM 1 O3' U A2260 72.546 55.818 74.147 1.00 62.06 O
ATOM 2 P G A2261 72.574 56.943 75.302 1.00 59.57 P
ATOM 3 OP1 G A2261 71.322 56.879 76.095 1.00 61.47 O
ATOM 4 OP2 G A2261 72.929 58.203 74.609 1.00 61.51 O
ATOM 5 O5' G A2261 73.807 56.507 76.226 1.00 55.80 O
ATOM 6 C5' G A2261 74.096 55.111 76.399 1.00 54.55 C
ATOM 7 C4' G A2261 75.311 54.875 77.271 1.00 53.54 C
ATOM 8 O4' G A2261 76.533 55.328 76.645 1.00 53.63 O
ATOM 9 C3' G A2261 75.404 55.512 78.640 1.00 51.78 C
ATOM 10 O3' G A2261 74.531 54.863 79.554 1.00 52.56 O
ATOM 11 C2' G A2261 76.858 55.198 78.991 1.00 51.03 C
ATOM 12 O2' G A2261 77.019 53.846 79.372 1.00 51.16 O
ATOM 13 C1' G A2261 77.550 55.367 77.634 1.00 50.52 C
ATOM 14 N9 G A2261 78.295 56.615 77.507 1.00 49.64 N
ATOM 15 C8 G A2261 77.920 57.744 76.817 1.00 49.81 C
ATOM 16 N7 G A2261 78.795 58.708 76.899 1.00 50.27 N
ATOM 17 C5 G A2261 79.811 58.186 77.690 1.00 49.09 C
ATOM 18 C6 G A2261 81.028 58.771 78.132 1.00 48.79 C
ATOM 19 O6 G A2261 81.467 59.907 77.907 1.00 49.22 O
ATOM 20 N1 G A2261 81.764 57.888 78.911 1.00 47.20 N
ATOM 21 C2 G A2261 81.384 56.611 79.229 1.00 46.47 C
ATOM 22 N2 G A2261 82.239 55.916 79.990 1.00 45.44 N
ATOM 23 N3 G A2261 80.252 56.056 78.830 1.00 46.68 N
ATOM 24 C4 G A2261 79.519 56.894 78.069 1.00 48.35 C
ATOM 25 P G A2262 74.167 55.569 80.952 1.00 52.78 P
ATOM 26 OP1 G A2262 73.032 54.813 81.545 1.00 52.58 O
ATOM 27 OP2 G A2262 74.026 57.028 80.703 1.00 53.01 O
ATOM 28 O5' G A2262 75.456 55.346 81.859 1.00 48.24 O
TER
ATOM 1 O3' G B2220 77.417 50.239 74.066 1.00 53.51 O
ATOM 2 P A B2221 78.627 50.972 74.831 1.00 54.38 P
ATOM 3 OP1 A B2221 79.903 50.287 74.494 1.00 54.83 O
ATOM 4 OP2 A B2221 78.239 51.131 76.257 1.00 55.98 O
ATOM 5 O5' A B2221 78.657 52.424 74.178 1.00 54.55 O
ATOM 6 C5' A B2221 77.473 53.250 74.157 1.00 53.47 C
ATOM 7 C4' A B2221 77.811 54.636 73.659 1.00 51.53 C
ATOM 8 O4' A B2221 78.761 55.244 74.580 1.00 50.85 O
ATOM 9 C3' A B2221 78.459 54.697 72.279 1.00 50.69 C
ATOM 10 O3' A B2221 78.048 55.885 71.605 1.00 48.79 O
ATOM 11 C2' A B2221 79.949 54.744 72.623 1.00 50.54 C
ATOM 12 O2' A B2221 80.757 55.325 71.622 1.00 51.17 O
ATOM 13 C1' A B2221 79.941 55.601 73.886 1.00 49.35 C
ATOM 14 N9 A B2221 81.079 55.378 74.777 1.00 49.09 N
ATOM 15 C8 A B2221 81.467 54.199 75.360 1.00 49.76 C
ATOM 16 N7 A B2221 82.528 54.309 76.125 1.00 50.46 N
ATOM 17 C5 A B2221 82.863 55.651 76.040 1.00 49.97 C
ATOM 18 C6 A B2221 83.900 56.404 76.618 1.00 49.88 C
ATOM 19 N6 A B2221 84.817 55.892 77.442 1.00 49.59 N
ATOM 20 N1 A B2221 83.964 57.719 76.320 1.00 50.06 N
ATOM 21 C2 A B2221 83.040 58.234 75.502 1.00 50.82 C
ATOM 22 N3 A B2221 82.014 57.632 74.899 1.00 52.17 N
ATOM 23 C4 A B2221 81.982 56.324 75.211 1.00 50.43 C
ATOM 24 P C B2222 76.779 55.846 70.613 1.00 50.75 P
ATOM 25 OP1 C B2222 76.793 57.089 69.795 1.00 52.62 O
ATOM 26 OP2 C B2222 75.581 55.517 71.416 1.00 51.67 O
ATOM 27 O5' C B2222 77.072 54.622 69.638 1.00 50.72 O
TER
ATOM 2 P G A2261 72.574 56.943 75.302 1.00 59.57 P
ATOM 3 OP1 G A2261 71.322 56.879 76.095 1.00 61.47 O
ATOM 4 OP2 G A2261 72.929 58.203 74.609 1.00 61.51 O
ATOM 5 O5' G A2261 73.807 56.507 76.226 1.00 55.80 O
ATOM 6 C5' G A2261 74.096 55.111 76.399 1.00 54.55 C
ATOM 7 C4' G A2261 75.311 54.875 77.271 1.00 53.54 C
ATOM 8 O4' G A2261 76.533 55.328 76.645 1.00 53.63 O
ATOM 9 C3' G A2261 75.404 55.512 78.640 1.00 51.78 C
ATOM 10 O3' G A2261 74.531 54.863 79.554 1.00 52.56 O
ATOM 11 C2' G A2261 76.858 55.198 78.991 1.00 51.03 C
ATOM 12 O2' G A2261 77.019 53.846 79.372 1.00 51.16 O
ATOM 13 C1' G A2261 77.550 55.367 77.634 1.00 50.52 C
ATOM 14 N9 G A2261 78.295 56.615 77.507 1.00 49.64 N
ATOM 15 C8 G A2261 77.920 57.744 76.817 1.00 49.81 C
ATOM 16 N7 G A2261 78.795 58.708 76.899 1.00 50.27 N
ATOM 17 C5 G A2261 79.811 58.186 77.690 1.00 49.09 C
ATOM 18 C6 G A2261 81.028 58.771 78.132 1.00 48.79 C
ATOM 19 O6 G A2261 81.467 59.907 77.907 1.00 49.22 O
ATOM 20 N1 G A2261 81.764 57.888 78.911 1.00 47.20 N
ATOM 21 C2 G A2261 81.384 56.611 79.229 1.00 46.47 C
ATOM 22 N2 G A2261 82.239 55.916 79.990 1.00 45.44 N
ATOM 23 N3 G A2261 80.252 56.056 78.830 1.00 46.68 N
ATOM 24 C4 G A2261 79.519 56.894 78.069 1.00 48.35 C
ATOM 25 P G A2262 74.167 55.569 80.952 1.00 52.78 P
ATOM 26 OP1 G A2262 73.032 54.813 81.545 1.00 52.58 O
ATOM 27 OP2 G A2262 74.026 57.028 80.703 1.00 53.01 O
ATOM 28 O5' G A2262 75.456 55.346 81.859 1.00 48.24 O
TER
ATOM 1 O3' G B2220 77.417 50.239 74.066 1.00 53.51 O
ATOM 2 P A B2221 78.627 50.972 74.831 1.00 54.38 P
ATOM 3 OP1 A B2221 79.903 50.287 74.494 1.00 54.83 O
ATOM 4 OP2 A B2221 78.239 51.131 76.257 1.00 55.98 O
ATOM 5 O5' A B2221 78.657 52.424 74.178 1.00 54.55 O
ATOM 6 C5' A B2221 77.473 53.250 74.157 1.00 53.47 C
ATOM 7 C4' A B2221 77.811 54.636 73.659 1.00 51.53 C
ATOM 8 O4' A B2221 78.761 55.244 74.580 1.00 50.85 O
ATOM 9 C3' A B2221 78.459 54.697 72.279 1.00 50.69 C
ATOM 10 O3' A B2221 78.048 55.885 71.605 1.00 48.79 O
ATOM 11 C2' A B2221 79.949 54.744 72.623 1.00 50.54 C
ATOM 12 O2' A B2221 80.757 55.325 71.622 1.00 51.17 O
ATOM 13 C1' A B2221 79.941 55.601 73.886 1.00 49.35 C
ATOM 14 N9 A B2221 81.079 55.378 74.777 1.00 49.09 N
ATOM 15 C8 A B2221 81.467 54.199 75.360 1.00 49.76 C
ATOM 16 N7 A B2221 82.528 54.309 76.125 1.00 50.46 N
ATOM 17 C5 A B2221 82.863 55.651 76.040 1.00 49.97 C
ATOM 18 C6 A B2221 83.900 56.404 76.618 1.00 49.88 C
ATOM 19 N6 A B2221 84.817 55.892 77.442 1.00 49.59 N
ATOM 20 N1 A B2221 83.964 57.719 76.320 1.00 50.06 N
ATOM 21 C2 A B2221 83.040 58.234 75.502 1.00 50.82 C
ATOM 22 N3 A B2221 82.014 57.632 74.899 1.00 52.17 N
ATOM 23 C4 A B2221 81.982 56.324 75.211 1.00 50.43 C
ATOM 24 P C B2222 76.779 55.846 70.613 1.00 50.75 P
ATOM 25 OP1 C B2222 76.793 57.089 69.795 1.00 52.62 O
ATOM 26 OP2 C B2222 75.581 55.517 71.416 1.00 51.67 O
ATOM 27 O5' C B2222 77.072 54.622 69.638 1.00 50.72 O
TER
Atoms:
OP1: (71.322,56.879,76.095)
OP2: (72.929,58.203,74.609)
C3': (75.404,55.512,78.640)
C1': (77.550,55.367,77.634)
C5': (74.096,55.111,76.399)
O6: (81.467,59.907,77.907)
O4': (76.533,55.328,76.645)
C8: (77.920,57.744,76.817)
C2: (81.384,56.611,79.229)
C6: (81.028,58.771,78.132)
C5: (79.811,58.186,77.690)
C4: (79.519,56.894,78.069)
P: (72.574,56.943,75.302)
C4': (75.311,54.875,77.271)
C2': (76.858,55.198,78.991)
O2': (77.019,53.846,79.372)
N1: (81.764,57.888,78.911)
N2: (82.239,55.916,79.990)
N3: (80.252,56.056,78.830)
N7: (78.795,58.708,76.899)
N9: (78.295,56.615,77.507)
O5': (73.807,56.507,76.226)
O3': (74.531,54.863,79.554)
OP2: (72.929,58.203,74.609)
C3': (75.404,55.512,78.640)
C1': (77.550,55.367,77.634)
C5': (74.096,55.111,76.399)
O6: (81.467,59.907,77.907)
O4': (76.533,55.328,76.645)
C8: (77.920,57.744,76.817)
C2: (81.384,56.611,79.229)
C6: (81.028,58.771,78.132)
C5: (79.811,58.186,77.690)
C4: (79.519,56.894,78.069)
P: (72.574,56.943,75.302)
C4': (75.311,54.875,77.271)
C2': (76.858,55.198,78.991)
O2': (77.019,53.846,79.372)
N1: (81.764,57.888,78.911)
N2: (82.239,55.916,79.990)
N3: (80.252,56.056,78.830)
N7: (78.795,58.708,76.899)
N9: (78.295,56.615,77.507)
O5': (73.807,56.507,76.226)
O3': (74.531,54.863,79.554)
OP1: (79.903,50.287,74.494)
OP2: (78.239,51.131,76.257)
C3': (78.459,54.697,72.279)
C1': (79.941,55.601,73.886)
C5': (77.473,53.250,74.157)
O4': (78.761,55.244,74.580)
C8: (81.467,54.199,75.360)
O2': (80.757,55.325,71.622)
C6: (83.900,56.404,76.618)
C5: (82.863,55.651,76.040)
C4: (81.982,56.324,75.211)
P: (78.627,50.972,74.831)
C4': (77.811,54.636,73.659)
C2': (79.949,54.744,72.623)
C2: (83.040,58.234,75.502)
N1: (83.964,57.719,76.320)
N3: (82.014,57.632,74.899)
N6: (84.817,55.892,77.442)
N7: (82.528,54.309,76.125)
N9: (81.079,55.378,74.777)
O5': (78.657,52.424,74.178)
O3': (78.048,55.885,71.605)
OP2: (78.239,51.131,76.257)
C3': (78.459,54.697,72.279)
C1': (79.941,55.601,73.886)
C5': (77.473,53.250,74.157)
O4': (78.761,55.244,74.580)
C8: (81.467,54.199,75.360)
O2': (80.757,55.325,71.622)
C6: (83.900,56.404,76.618)
C5: (82.863,55.651,76.040)
C4: (81.982,56.324,75.211)
P: (78.627,50.972,74.831)
C4': (77.811,54.636,73.659)
C2': (79.949,54.744,72.623)
C2: (83.040,58.234,75.502)
N1: (83.964,57.719,76.320)
N3: (82.014,57.632,74.899)
N6: (84.817,55.892,77.442)
N7: (82.528,54.309,76.125)
N9: (81.079,55.378,74.777)
O5': (78.657,52.424,74.178)
O3': (78.048,55.885,71.605)
Image (generated by PyMOL):