ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:9113:912

Extra

PDB:
ATOM 1 O3' C A 112 54.679 29.448 112.786 1.00 59.55 O
ATOM 2 P G A 113 54.133 28.643 111.506 1.00 61.56 P
ATOM 3 OP1 G A 113 53.192 27.589 111.987 1.00 61.35 O
ATOM 4 OP2 G A 113 55.291 28.261 110.655 1.00 60.81 O
ATOM 5 O5' G A 113 53.289 29.745 110.720 1.00 61.60 O
ATOM 6 C5' G A 113 52.517 29.403 109.553 1.00 60.31 C
ATOM 7 C4' G A 113 51.677 30.585 109.125 1.00 60.03 C
ATOM 8 O4' G A 113 52.535 31.663 108.647 1.00 59.70 O
ATOM 9 C3' G A 113 50.736 30.332 107.961 1.00 59.28 C
ATOM 10 O3' G A 113 49.542 29.690 108.403 1.00 60.24 O
ATOM 11 C2' G A 113 50.488 31.745 107.451 1.00 58.79 C
ATOM 12 O2' G A 113 49.599 32.461 108.287 1.00 58.01 O
ATOM 13 C1' G A 113 51.884 32.358 107.590 1.00 57.55 C
ATOM 14 N9 G A 113 52.694 32.240 106.377 1.00 55.26 N
ATOM 15 C8 G A 113 53.744 31.381 106.154 1.00 54.55 C
ATOM 16 N7 G A 113 54.292 31.532 104.978 1.00 54.34 N
ATOM 17 C5 G A 113 53.556 32.546 104.382 1.00 54.36 C
ATOM 18 C6 G A 113 53.688 33.152 103.100 1.00 54.81 C
ATOM 19 O6 G A 113 54.509 32.899 102.202 1.00 53.59 O
ATOM 20 N1 G A 113 52.730 34.146 102.907 1.00 54.21 N
ATOM 21 C2 G A 113 51.769 34.505 103.820 1.00 53.34 C
ATOM 22 N2 G A 113 50.934 35.475 103.450 1.00 53.39 N
ATOM 23 N3 G A 113 51.637 33.951 105.012 1.00 54.93 N
ATOM 24 C4 G A 113 52.559 32.988 105.228 1.00 55.23 C
ATOM 25 P C A 114 48.778 28.656 107.429 1.00 59.87 P
ATOM 26 OP1 C A 114 47.813 27.899 108.274 1.00 59.91 O
ATOM 27 OP2 C A 114 49.789 27.917 106.613 1.00 58.76 O
ATOM 28 O5' C A 114 47.936 29.597 106.457 1.00 59.13 O
TER

ATOM 1 O3' C B 11 52.864 36.415 111.140 1.00 55.32 O
ATOM 2 P A B 12 54.331 35.938 111.586 1.00 56.01 P
ATOM 3 OP1 A B 12 54.157 34.908 112.645 1.00 57.07 O
ATOM 4 OP2 A B 12 55.141 37.147 111.885 1.00 57.58 O
ATOM 5 O5' A B 12 54.909 35.240 110.273 1.00 54.80 O
ATOM 6 C5' A B 12 54.796 33.818 110.092 1.00 54.92 C
ATOM 7 C4' A B 12 55.532 33.379 108.848 1.00 55.05 C
ATOM 8 O4' A B 12 54.771 33.756 107.669 1.00 54.84 O
ATOM 9 C3' A B 12 56.934 33.953 108.652 1.00 54.78 C
ATOM 10 O3' A B 12 57.746 32.974 107.986 1.00 54.15 O
ATOM 11 C2' A B 12 56.654 35.125 107.714 1.00 54.75 C
ATOM 12 O2' A B 12 57.763 35.547 106.949 1.00 56.57 O
ATOM 13 C1' A B 12 55.598 34.504 106.806 1.00 55.02 C
ATOM 14 N9 A B 12 54.781 35.458 106.058 1.00 54.69 N
ATOM 15 C8 A B 12 53.652 36.131 106.457 1.00 54.41 C
ATOM 16 N7 A B 12 53.163 36.929 105.539 1.00 54.36 N
ATOM 17 C5 A B 12 54.028 36.771 104.464 1.00 53.91 C
ATOM 18 C6 A B 12 54.063 37.351 103.187 1.00 53.20 C
ATOM 19 N6 A B 12 53.168 38.244 102.753 1.00 53.68 N
ATOM 20 N1 A B 12 55.060 36.979 102.356 1.00 52.80 N
ATOM 21 C2 A B 12 55.953 36.082 102.787 1.00 53.36 C
ATOM 22 N3 A B 12 56.026 35.467 103.963 1.00 54.70 N
ATOM 23 C4 A B 12 55.023 35.863 104.767 1.00 54.36 C
ATOM 24 P G B 13 59.080 32.408 108.693 1.00 53.70 P
ATOM 25 OP1 G B 13 59.568 31.248 107.902 1.00 55.31 O
ATOM 26 OP2 G B 13 58.813 32.246 110.145 1.00 54.21 O
ATOM 27 O5' G B 13 60.170 33.552 108.496 1.00 55.43 O
TER

Atoms:
OP1: (53.192,27.589,111.987)
OP2: (55.291,28.261,110.655)
C3': (50.736,30.332,107.961)
C1': (51.884,32.358,107.590)
C5': (52.517,29.403,109.553)
O6: (54.509,32.899,102.202)
O4': (52.535,31.663,108.647)
C8: (53.744,31.381,106.154)
C2: (51.769,34.505,103.820)
C6: (53.688,33.152,103.100)
C5: (53.556,32.546,104.382)
C4: (52.559,32.988,105.228)
P: (54.133,28.643,111.506)
C4': (51.677,30.585,109.125)
C2': (50.488,31.745,107.451)
O2': (49.599,32.461,108.287)
N1: (52.730,34.146,102.907)
N2: (50.934,35.475,103.450)
N3: (51.637,33.951,105.012)
N7: (54.292,31.532,104.978)
N9: (52.694,32.240,106.377)
O5': (53.289,29.745,110.720)
O3': (49.542,29.690,108.403)
OP1: (54.157,34.908,112.645)
OP2: (55.141,37.147,111.885)
C3': (56.934,33.953,108.652)
C1': (55.598,34.504,106.806)
C5': (54.796,33.818,110.092)
O4': (54.771,33.756,107.669)
C8: (53.652,36.131,106.457)
O2': (57.763,35.547,106.949)
C6: (54.063,37.351,103.187)
C5: (54.028,36.771,104.464)
C4: (55.023,35.863,104.767)
P: (54.331,35.938,111.586)
C4': (55.532,33.379,108.848)
C2': (56.654,35.125,107.714)
C2: (55.953,36.082,102.787)
N1: (55.060,36.979,102.356)
N3: (56.026,35.467,103.963)
N6: (53.168,38.244,102.753)
N7: (53.163,36.929,105.539)
N9: (54.781,35.458,106.058)
O5': (54.909,35.240,110.273)
O3': (57.746,32.974,107.986)
Image (generated by PyMOL):
PyMOL image
show in jmol