Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VTQ:A16:A56
Extra
PDB:
ATOM 1 P G A 16 14.286 21.271 14.696 1.00 1.00 P
ATOM 2 OP1 G A 16 14.588 21.359 16.146 1.00 1.00 O
ATOM 3 OP2 G A 16 14.799 19.999 14.113 1.00 1.00 O
ATOM 4 O5' G A 16 12.779 21.597 14.322 1.00 1.00 O
ATOM 5 C5' G A 16 12.266 21.135 13.021 1.00 1.00 C
ATOM 6 C4' G A 16 10.783 20.944 13.306 1.00 1.00 C
ATOM 7 O4' G A 16 10.668 20.244 14.516 1.00 1.00 O
ATOM 8 C3' G A 16 10.035 22.264 13.470 1.00 1.00 C
ATOM 9 O3' G A 16 8.648 22.148 13.081 1.00 1.00 O
ATOM 10 C2' G A 16 10.125 22.447 14.995 1.00 1.00 C
ATOM 11 O2' G A 16 9.161 23.372 15.399 1.00 1.00 O
ATOM 12 C1' G A 16 9.914 21.033 15.473 1.00 1.00 C
ATOM 13 N9 G A 16 10.397 20.836 16.849 1.00 1.00 N
ATOM 14 C8 G A 16 11.542 21.359 17.402 1.00 1.00 C
ATOM 15 N7 G A 16 11.729 21.019 18.643 1.00 1.00 N
ATOM 16 C5 G A 16 10.632 20.210 18.942 1.00 1.00 C
ATOM 17 C6 G A 16 10.258 19.530 20.138 1.00 1.00 C
ATOM 18 O6 G A 16 10.861 19.517 21.214 1.00 1.00 O
ATOM 19 N1 G A 16 9.094 18.816 20.033 1.00 1.00 N
ATOM 20 C2 G A 16 8.359 18.768 18.897 1.00 1.00 C
ATOM 21 N2 G A 16 7.249 18.027 18.972 1.00 1.00 N
ATOM 22 N3 G A 16 8.666 19.387 17.746 1.00 1.00 N
ATOM 23 C4 G A 16 9.812 20.088 17.835 1.00 1.00 C
ATOM 24 P G A 17 7.936 23.467 12.483 1.00 1.00 P
ATOM 25 OP1 G A 17 8.141 23.413 10.973 1.00 1.00 O
ATOM 26 OP2 G A 17 8.757 24.555 13.081 1.00 1.00 O
ATOM 27 O5' G A 17 6.411 23.386 12.887 1.00 1.00 O
TER
ATOM 1 O3' A B 55 3.064 16.232 18.194 1.00 1.00 O
ATOM 2 P A B 56 4.035 15.062 17.716 1.00 1.00 P
ATOM 3 OP1 A B 56 3.414 14.301 16.580 1.00 1.00 O
ATOM 4 OP2 A B 56 4.156 14.199 18.927 1.00 1.00 O
ATOM 5 O5' A B 56 5.374 15.783 17.237 1.00 1.00 O
ATOM 6 C5' A B 56 5.368 16.606 16.041 1.00 1.00 C
ATOM 7 C4' A B 56 6.592 16.178 15.234 1.00 1.00 C
ATOM 8 O4' A B 56 7.731 16.409 16.026 1.00 1.00 O
ATOM 9 C3' A B 56 6.598 14.688 14.875 1.00 1.00 C
ATOM 10 O3' A B 56 7.279 14.437 13.634 1.00 1.00 O
ATOM 11 C2' A B 56 7.412 14.110 16.041 1.00 1.00 C
ATOM 12 O2' A B 56 7.840 12.825 15.683 1.00 1.00 O
ATOM 13 C1' A B 56 8.467 15.171 16.206 1.00 1.00 C
ATOM 14 N9 A B 56 9.112 15.151 17.521 1.00 1.00 N
ATOM 15 C8 A B 56 8.738 14.437 18.643 1.00 1.00 C
ATOM 16 N7 A B 56 9.510 14.627 19.674 1.00 1.00 N
ATOM 17 C5 A B 56 10.463 15.532 19.211 1.00 1.00 C
ATOM 18 C6 A B 56 11.566 16.130 19.869 1.00 1.00 C
ATOM 19 N6 A B 56 11.904 15.899 21.124 1.00 1.00 N
ATOM 20 N1 A B 56 12.290 16.987 19.091 1.00 1.00 N
ATOM 21 C2 A B 56 11.964 17.238 17.791 1.00 1.00 C
ATOM 22 N3 A B 56 10.939 16.708 17.118 1.00 1.00 N
ATOM 23 C4 A B 56 10.228 15.865 17.895 1.00 1.00 C
ATOM 24 P U B 57 6.851 13.383 12.498 1.00 1.00 P
ATOM 25 OP1 U B 57 5.814 13.981 11.586 1.00 1.00 O
ATOM 26 OP2 U B 57 6.344 12.200 13.261 1.00 1.00 O
ATOM 27 O5' U B 57 8.189 13.111 11.661 1.00 1.00 O
TER
ATOM 2 OP1 G A 16 14.588 21.359 16.146 1.00 1.00 O
ATOM 3 OP2 G A 16 14.799 19.999 14.113 1.00 1.00 O
ATOM 4 O5' G A 16 12.779 21.597 14.322 1.00 1.00 O
ATOM 5 C5' G A 16 12.266 21.135 13.021 1.00 1.00 C
ATOM 6 C4' G A 16 10.783 20.944 13.306 1.00 1.00 C
ATOM 7 O4' G A 16 10.668 20.244 14.516 1.00 1.00 O
ATOM 8 C3' G A 16 10.035 22.264 13.470 1.00 1.00 C
ATOM 9 O3' G A 16 8.648 22.148 13.081 1.00 1.00 O
ATOM 10 C2' G A 16 10.125 22.447 14.995 1.00 1.00 C
ATOM 11 O2' G A 16 9.161 23.372 15.399 1.00 1.00 O
ATOM 12 C1' G A 16 9.914 21.033 15.473 1.00 1.00 C
ATOM 13 N9 G A 16 10.397 20.836 16.849 1.00 1.00 N
ATOM 14 C8 G A 16 11.542 21.359 17.402 1.00 1.00 C
ATOM 15 N7 G A 16 11.729 21.019 18.643 1.00 1.00 N
ATOM 16 C5 G A 16 10.632 20.210 18.942 1.00 1.00 C
ATOM 17 C6 G A 16 10.258 19.530 20.138 1.00 1.00 C
ATOM 18 O6 G A 16 10.861 19.517 21.214 1.00 1.00 O
ATOM 19 N1 G A 16 9.094 18.816 20.033 1.00 1.00 N
ATOM 20 C2 G A 16 8.359 18.768 18.897 1.00 1.00 C
ATOM 21 N2 G A 16 7.249 18.027 18.972 1.00 1.00 N
ATOM 22 N3 G A 16 8.666 19.387 17.746 1.00 1.00 N
ATOM 23 C4 G A 16 9.812 20.088 17.835 1.00 1.00 C
ATOM 24 P G A 17 7.936 23.467 12.483 1.00 1.00 P
ATOM 25 OP1 G A 17 8.141 23.413 10.973 1.00 1.00 O
ATOM 26 OP2 G A 17 8.757 24.555 13.081 1.00 1.00 O
ATOM 27 O5' G A 17 6.411 23.386 12.887 1.00 1.00 O
TER
ATOM 1 O3' A B 55 3.064 16.232 18.194 1.00 1.00 O
ATOM 2 P A B 56 4.035 15.062 17.716 1.00 1.00 P
ATOM 3 OP1 A B 56 3.414 14.301 16.580 1.00 1.00 O
ATOM 4 OP2 A B 56 4.156 14.199 18.927 1.00 1.00 O
ATOM 5 O5' A B 56 5.374 15.783 17.237 1.00 1.00 O
ATOM 6 C5' A B 56 5.368 16.606 16.041 1.00 1.00 C
ATOM 7 C4' A B 56 6.592 16.178 15.234 1.00 1.00 C
ATOM 8 O4' A B 56 7.731 16.409 16.026 1.00 1.00 O
ATOM 9 C3' A B 56 6.598 14.688 14.875 1.00 1.00 C
ATOM 10 O3' A B 56 7.279 14.437 13.634 1.00 1.00 O
ATOM 11 C2' A B 56 7.412 14.110 16.041 1.00 1.00 C
ATOM 12 O2' A B 56 7.840 12.825 15.683 1.00 1.00 O
ATOM 13 C1' A B 56 8.467 15.171 16.206 1.00 1.00 C
ATOM 14 N9 A B 56 9.112 15.151 17.521 1.00 1.00 N
ATOM 15 C8 A B 56 8.738 14.437 18.643 1.00 1.00 C
ATOM 16 N7 A B 56 9.510 14.627 19.674 1.00 1.00 N
ATOM 17 C5 A B 56 10.463 15.532 19.211 1.00 1.00 C
ATOM 18 C6 A B 56 11.566 16.130 19.869 1.00 1.00 C
ATOM 19 N6 A B 56 11.904 15.899 21.124 1.00 1.00 N
ATOM 20 N1 A B 56 12.290 16.987 19.091 1.00 1.00 N
ATOM 21 C2 A B 56 11.964 17.238 17.791 1.00 1.00 C
ATOM 22 N3 A B 56 10.939 16.708 17.118 1.00 1.00 N
ATOM 23 C4 A B 56 10.228 15.865 17.895 1.00 1.00 C
ATOM 24 P U B 57 6.851 13.383 12.498 1.00 1.00 P
ATOM 25 OP1 U B 57 5.814 13.981 11.586 1.00 1.00 O
ATOM 26 OP2 U B 57 6.344 12.200 13.261 1.00 1.00 O
ATOM 27 O5' U B 57 8.189 13.111 11.661 1.00 1.00 O
TER
Atoms:
OP1: (14.588,21.359,16.146)
OP2: (14.799,19.999,14.113)
C3': (10.035,22.264,13.470)
C1': (9.914,21.033,15.473)
C5': (12.266,21.135,13.021)
O6: (10.861,19.517,21.214)
O4': (10.668,20.244,14.516)
C8: (11.542,21.359,17.402)
C2: (8.359,18.768,18.897)
C6: (10.258,19.530,20.138)
C5: (10.632,20.210,18.942)
C4: (9.812,20.088,17.835)
P: (14.286,21.271,14.696)
C4': (10.783,20.944,13.306)
C2': (10.125,22.447,14.995)
O2': (9.161,23.372,15.399)
N1: (9.094,18.816,20.033)
N2: (7.249,18.027,18.972)
N3: (8.666,19.387,17.746)
N7: (11.729,21.019,18.643)
N9: (10.397,20.836,16.849)
O5': (12.779,21.597,14.322)
O3': (8.648,22.148,13.081)
OP2: (14.799,19.999,14.113)
C3': (10.035,22.264,13.470)
C1': (9.914,21.033,15.473)
C5': (12.266,21.135,13.021)
O6: (10.861,19.517,21.214)
O4': (10.668,20.244,14.516)
C8: (11.542,21.359,17.402)
C2: (8.359,18.768,18.897)
C6: (10.258,19.530,20.138)
C5: (10.632,20.210,18.942)
C4: (9.812,20.088,17.835)
P: (14.286,21.271,14.696)
C4': (10.783,20.944,13.306)
C2': (10.125,22.447,14.995)
O2': (9.161,23.372,15.399)
N1: (9.094,18.816,20.033)
N2: (7.249,18.027,18.972)
N3: (8.666,19.387,17.746)
N7: (11.729,21.019,18.643)
N9: (10.397,20.836,16.849)
O5': (12.779,21.597,14.322)
O3': (8.648,22.148,13.081)
OP1: (3.414,14.301,16.580)
OP2: (4.156,14.199,18.927)
C3': (6.598,14.688,14.875)
C1': (8.467,15.171,16.206)
C5': (5.368,16.606,16.041)
O4': (7.731,16.409,16.026)
C8: (8.738,14.437,18.643)
O2': (7.840,12.825,15.683)
C6: (11.566,16.130,19.869)
C5: (10.463,15.532,19.211)
C4: (10.228,15.865,17.895)
P: (4.035,15.062,17.716)
C4': (6.592,16.178,15.234)
C2': (7.412,14.110,16.041)
C2: (11.964,17.238,17.791)
N1: (12.290,16.987,19.091)
N3: (10.939,16.708,17.118)
N6: (11.904,15.899,21.124)
N7: (9.510,14.627,19.674)
N9: (9.112,15.151,17.521)
O5': (5.374,15.783,17.237)
O3': (7.279,14.437,13.634)
OP2: (4.156,14.199,18.927)
C3': (6.598,14.688,14.875)
C1': (8.467,15.171,16.206)
C5': (5.368,16.606,16.041)
O4': (7.731,16.409,16.026)
C8: (8.738,14.437,18.643)
O2': (7.840,12.825,15.683)
C6: (11.566,16.130,19.869)
C5: (10.463,15.532,19.211)
C4: (10.228,15.865,17.895)
P: (4.035,15.062,17.716)
C4': (6.592,16.178,15.234)
C2': (7.412,14.110,16.041)
C2: (11.964,17.238,17.791)
N1: (12.290,16.987,19.091)
N3: (10.939,16.708,17.118)
N6: (11.904,15.899,21.124)
N7: (9.510,14.627,19.674)
N9: (9.112,15.151,17.521)
O5': (5.374,15.783,17.237)
O3': (7.279,14.437,13.634)
Image (generated by PyMOL):