ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QC0:C17:D2

Extra

PDB:
ATOM 1 O3' U A 16 16.520 36.979 73.296 1.00 51.91 O
ATOM 2 P G A 17 15.860 36.300 74.602 1.00 55.77 P
ATOM 3 OP1 G A 17 16.020 37.254 75.729 1.00 62.03 O
ATOM 4 OP2 G A 17 16.352 34.905 74.719 1.00 59.94 O
ATOM 5 O5' G A 17 14.315 36.200 74.219 1.00 54.99 O
ATOM 6 C5' G A 17 13.491 37.373 74.217 1.00 58.26 C
ATOM 7 C4' G A 17 12.115 37.018 73.719 1.00 59.70 C
ATOM 8 O4' G A 17 12.248 36.315 72.454 1.00 56.07 O
ATOM 9 C3' G A 17 11.346 36.034 74.600 1.00 60.79 C
ATOM 10 O3' G A 17 10.722 36.720 75.673 1.00 64.37 O
ATOM 11 C2' G A 17 10.329 35.501 73.594 1.00 58.12 C
ATOM 12 O2' G A 17 9.279 36.411 73.323 1.00 59.94 O
ATOM 13 C1' G A 17 11.216 35.363 72.356 1.00 58.33 C
ATOM 14 N9 G A 17 11.841 34.054 72.225 1.00 55.90 N
ATOM 15 C8 G A 17 13.156 33.710 72.430 1.00 53.81 C
ATOM 16 N7 G A 17 13.374 32.438 72.230 1.00 56.32 N
ATOM 17 C5 G A 17 12.140 31.917 71.864 1.00 59.04 C
ATOM 18 C6 G A 17 11.740 30.603 71.513 1.00 62.33 C
ATOM 19 O6 G A 17 12.423 29.572 71.448 1.00 64.74 O
ATOM 20 N1 G A 17 10.379 30.529 71.225 1.00 62.58 N
ATOM 21 C2 G A 17 9.509 31.586 71.255 1.00 59.80 C
ATOM 22 N2 G A 17 8.238 31.316 70.943 1.00 65.95 N
ATOM 23 N3 G A 17 9.862 32.821 71.572 1.00 57.85 N
ATOM 24 C4 G A 17 11.177 32.906 71.860 1.00 57.59 C
ATOM 25 P C A 18 10.579 35.984 77.092 1.00 74.98 P
ATOM 26 OP1 C A 18 10.227 37.027 78.087 1.00 85.33 O
ATOM 27 OP2 C A 18 11.748 35.097 77.338 1.00 69.96 O
ATOM 28 O5' C A 18 9.315 35.038 76.855 1.00 72.15 O
TER

ATOM 1 O3' C B 1 4.789 26.359 66.149 1.00 75.85 O
ATOM 2 P A B 2 5.443 26.994 64.820 1.00 68.09 P
ATOM 3 OP1 A B 2 4.370 27.012 63.785 1.00 73.03 O
ATOM 4 OP2 A B 2 6.725 26.309 64.534 1.00 73.81 O
ATOM 5 O5' A B 2 5.761 28.505 65.226 1.00 66.51 O
ATOM 6 C5' A B 2 4.640 29.376 65.486 1.00 63.06 C
ATOM 7 C4' A B 2 5.112 30.713 65.973 1.00 61.69 C
ATOM 8 O4' A B 2 5.872 30.569 67.204 1.00 59.99 O
ATOM 9 C3' A B 2 6.089 31.427 65.038 1.00 59.83 C
ATOM 10 O3' A B 2 5.358 32.037 63.979 1.00 65.34 O
ATOM 11 C2' A B 2 6.653 32.455 66.020 1.00 57.44 C
ATOM 12 O2' A B 2 5.654 33.411 66.362 1.00 65.12 O
ATOM 13 C1' A B 2 6.874 31.567 67.248 1.00 56.52 C
ATOM 14 N9 A B 2 8.158 30.884 67.301 1.00 57.36 N
ATOM 15 C8 A B 2 8.413 29.581 66.952 1.00 59.63 C
ATOM 16 N7 A B 2 9.667 29.233 67.114 1.00 60.29 N
ATOM 17 C5 A B 2 10.273 30.377 67.613 1.00 57.51 C
ATOM 18 C6 A B 2 11.595 30.665 67.992 1.00 56.15 C
ATOM 19 N6 A B 2 12.592 29.780 67.928 1.00 54.92 N
ATOM 20 N1 A B 2 11.883 31.907 68.448 1.00 54.83 N
ATOM 21 C2 A B 2 10.878 32.789 68.509 1.00 54.95 C
ATOM 22 N3 A B 2 9.598 32.639 68.184 1.00 56.19 N
ATOM 23 C4 A B 2 9.352 31.398 67.737 1.00 57.06 C
ATOM 24 P C B 3 6.025 32.160 62.522 1.00 60.97 P
ATOM 25 OP1 C B 3 4.972 32.581 61.568 1.00 66.91 O
ATOM 26 OP2 C B 3 6.820 30.934 62.257 1.00 62.26 O
ATOM 27 O5' C B 3 7.030 33.379 62.699 1.00 58.21 O
TER

Atoms:
OP1: (16.020,37.254,75.729)
OP2: (16.352,34.905,74.719)
C3': (11.346,36.034,74.600)
C1': (11.216,35.363,72.356)
C5': (13.491,37.373,74.217)
O6: (12.423,29.572,71.448)
O4': (12.248,36.315,72.454)
C8: (13.156,33.710,72.430)
C2: (9.509,31.586,71.255)
C6: (11.740,30.603,71.513)
C5: (12.140,31.917,71.864)
C4: (11.177,32.906,71.860)
P: (15.860,36.300,74.602)
C4': (12.115,37.018,73.719)
C2': (10.329,35.501,73.594)
O2': (9.279,36.411,73.323)
N1: (10.379,30.529,71.225)
N2: (8.238,31.316,70.943)
N3: (9.862,32.821,71.572)
N7: (13.374,32.438,72.230)
N9: (11.841,34.054,72.225)
O5': (14.315,36.200,74.219)
O3': (10.722,36.720,75.673)
OP1: (4.370,27.012,63.785)
OP2: (6.725,26.309,64.534)
C3': (6.089,31.427,65.038)
C1': (6.874,31.567,67.248)
C5': (4.640,29.376,65.486)
O4': (5.872,30.569,67.204)
C8: (8.413,29.581,66.952)
O2': (5.654,33.411,66.362)
C6: (11.595,30.665,67.992)
C5: (10.273,30.377,67.613)
C4: (9.352,31.398,67.737)
P: (5.443,26.994,64.820)
C4': (5.112,30.713,65.973)
C2': (6.653,32.455,66.020)
C2: (10.878,32.789,68.509)
N1: (11.883,31.907,68.448)
N3: (9.598,32.639,68.184)
N6: (12.592,29.780,67.928)
N7: (9.667,29.233,67.114)
N9: (8.158,30.884,67.301)
O5': (5.761,28.505,65.226)
O3': (5.358,32.037,63.979)
Image (generated by PyMOL):
PyMOL image
show in jmol