Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OIY:B3:A20
Extra
PDB:
ATOM 1 O3' U A 2 -22.187 53.762 -38.819 1.00 34.48 O
ATOM 2 P G A 3 -21.909 54.569 -40.180 1.00 30.38 P
ATOM 3 OP1 G A 3 -23.046 54.297 -41.112 1.00 32.28 O
ATOM 4 OP2 G A 3 -20.516 54.331 -40.637 1.00 30.66 O
ATOM 5 O5' G A 3 -21.950 56.101 -39.735 1.00 29.94 O
ATOM 6 C5' G A 3 -23.179 56.726 -39.362 1.00 27.59 C
ATOM 7 C4' G A 3 -22.954 58.202 -39.105 1.00 27.07 C
ATOM 8 O4' G A 3 -22.141 58.393 -37.910 1.00 24.03 O
ATOM 9 C3' G A 3 -22.181 58.931 -40.188 1.00 26.42 C
ATOM 10 O3' G A 3 -23.026 59.325 -41.264 1.00 23.79 O
ATOM 11 C2' G A 3 -21.664 60.149 -39.437 1.00 23.95 C
ATOM 12 O2' G A 3 -22.722 61.069 -39.205 1.00 23.96 O
ATOM 13 C1' G A 3 -21.283 59.508 -38.097 1.00 25.32 C
ATOM 14 N9 G A 3 -19.923 59.005 -38.098 1.00 25.16 N
ATOM 15 C8 G A 3 -19.527 57.705 -38.337 1.00 24.94 C
ATOM 16 N7 G A 3 -18.248 57.533 -38.205 1.00 24.49 N
ATOM 17 C5 G A 3 -17.767 58.791 -37.859 1.00 25.03 C
ATOM 18 C6 G A 3 -16.449 59.209 -37.551 1.00 25.15 C
ATOM 19 O6 G A 3 -15.435 58.520 -37.491 1.00 25.88 O
ATOM 20 N1 G A 3 -16.387 60.576 -37.285 1.00 24.65 N
ATOM 21 C2 G A 3 -17.467 61.432 -37.300 1.00 24.61 C
ATOM 22 N2 G A 3 -17.201 62.724 -37.058 1.00 24.70 N
ATOM 23 N3 G A 3 -18.719 61.040 -37.550 1.00 25.44 N
ATOM 24 C4 G A 3 -18.787 59.717 -37.822 1.00 24.50 C
ATOM 25 P C A 4 -22.430 59.354 -42.741 1.00 23.65 P
ATOM 26 OP1 C A 4 -23.576 59.604 -43.659 1.00 25.52 O
ATOM 27 OP2 C A 4 -21.519 58.181 -42.977 1.00 24.81 O
ATOM 28 O5' C A 4 -21.456 60.607 -42.724 1.00 22.80 O
TER
ATOM 1 O3' C B 19 -12.057 66.575 -32.903 1.00 28.13 O
ATOM 2 P A B 20 -12.336 65.870 -31.481 1.00 29.80 P
ATOM 3 OP1 A B 20 -12.232 66.975 -30.489 1.00 30.19 O
ATOM 4 OP2 A B 20 -11.472 64.659 -31.333 1.00 27.63 O
ATOM 5 O5' A B 20 -13.863 65.384 -31.584 1.00 30.16 O
ATOM 6 C5' A B 20 -14.906 66.324 -31.901 1.00 29.50 C
ATOM 7 C4' A B 20 -16.198 65.603 -32.237 1.00 30.54 C
ATOM 8 O4' A B 20 -16.024 64.806 -33.437 1.00 29.65 O
ATOM 9 C3' A B 20 -16.673 64.599 -31.203 1.00 31.55 C
ATOM 10 O3' A B 20 -17.315 65.244 -30.117 1.00 34.05 O
ATOM 11 C2' A B 20 -17.588 63.693 -32.021 1.00 31.07 C
ATOM 12 O2' A B 20 -18.862 64.245 -32.260 1.00 31.84 O
ATOM 13 C1' A B 20 -16.831 63.638 -33.347 1.00 30.53 C
ATOM 14 N9 A B 20 -15.969 62.464 -33.433 1.00 28.96 N
ATOM 15 C8 A B 20 -14.608 62.394 -33.240 1.00 28.63 C
ATOM 16 N7 A B 20 -14.112 61.200 -33.424 1.00 29.09 N
ATOM 17 C5 A B 20 -15.219 60.421 -33.747 1.00 27.53 C
ATOM 18 C6 A B 20 -15.355 59.062 -34.078 1.00 28.16 C
ATOM 19 N6 A B 20 -14.328 58.215 -34.141 1.00 27.58 N
ATOM 20 N1 A B 20 -16.602 58.599 -34.348 1.00 27.53 N
ATOM 21 C2 A B 20 -17.620 59.459 -34.302 1.00 27.23 C
ATOM 22 N3 A B 20 -17.617 60.766 -34.016 1.00 27.68 N
ATOM 23 C4 A B 20 -16.371 61.186 -33.742 1.00 29.09 C
ATOM 24 P A B 21 -17.289 64.555 -28.656 1.00 35.44 P
ATOM 25 OP1 A B 21 -17.709 65.577 -27.650 1.00 37.14 O
ATOM 26 OP2 A B 21 -15.984 63.850 -28.504 1.00 35.85 O
ATOM 27 O5' A B 21 -18.392 63.408 -28.737 1.00 35.03 O
TER
ATOM 2 P G A 3 -21.909 54.569 -40.180 1.00 30.38 P
ATOM 3 OP1 G A 3 -23.046 54.297 -41.112 1.00 32.28 O
ATOM 4 OP2 G A 3 -20.516 54.331 -40.637 1.00 30.66 O
ATOM 5 O5' G A 3 -21.950 56.101 -39.735 1.00 29.94 O
ATOM 6 C5' G A 3 -23.179 56.726 -39.362 1.00 27.59 C
ATOM 7 C4' G A 3 -22.954 58.202 -39.105 1.00 27.07 C
ATOM 8 O4' G A 3 -22.141 58.393 -37.910 1.00 24.03 O
ATOM 9 C3' G A 3 -22.181 58.931 -40.188 1.00 26.42 C
ATOM 10 O3' G A 3 -23.026 59.325 -41.264 1.00 23.79 O
ATOM 11 C2' G A 3 -21.664 60.149 -39.437 1.00 23.95 C
ATOM 12 O2' G A 3 -22.722 61.069 -39.205 1.00 23.96 O
ATOM 13 C1' G A 3 -21.283 59.508 -38.097 1.00 25.32 C
ATOM 14 N9 G A 3 -19.923 59.005 -38.098 1.00 25.16 N
ATOM 15 C8 G A 3 -19.527 57.705 -38.337 1.00 24.94 C
ATOM 16 N7 G A 3 -18.248 57.533 -38.205 1.00 24.49 N
ATOM 17 C5 G A 3 -17.767 58.791 -37.859 1.00 25.03 C
ATOM 18 C6 G A 3 -16.449 59.209 -37.551 1.00 25.15 C
ATOM 19 O6 G A 3 -15.435 58.520 -37.491 1.00 25.88 O
ATOM 20 N1 G A 3 -16.387 60.576 -37.285 1.00 24.65 N
ATOM 21 C2 G A 3 -17.467 61.432 -37.300 1.00 24.61 C
ATOM 22 N2 G A 3 -17.201 62.724 -37.058 1.00 24.70 N
ATOM 23 N3 G A 3 -18.719 61.040 -37.550 1.00 25.44 N
ATOM 24 C4 G A 3 -18.787 59.717 -37.822 1.00 24.50 C
ATOM 25 P C A 4 -22.430 59.354 -42.741 1.00 23.65 P
ATOM 26 OP1 C A 4 -23.576 59.604 -43.659 1.00 25.52 O
ATOM 27 OP2 C A 4 -21.519 58.181 -42.977 1.00 24.81 O
ATOM 28 O5' C A 4 -21.456 60.607 -42.724 1.00 22.80 O
TER
ATOM 1 O3' C B 19 -12.057 66.575 -32.903 1.00 28.13 O
ATOM 2 P A B 20 -12.336 65.870 -31.481 1.00 29.80 P
ATOM 3 OP1 A B 20 -12.232 66.975 -30.489 1.00 30.19 O
ATOM 4 OP2 A B 20 -11.472 64.659 -31.333 1.00 27.63 O
ATOM 5 O5' A B 20 -13.863 65.384 -31.584 1.00 30.16 O
ATOM 6 C5' A B 20 -14.906 66.324 -31.901 1.00 29.50 C
ATOM 7 C4' A B 20 -16.198 65.603 -32.237 1.00 30.54 C
ATOM 8 O4' A B 20 -16.024 64.806 -33.437 1.00 29.65 O
ATOM 9 C3' A B 20 -16.673 64.599 -31.203 1.00 31.55 C
ATOM 10 O3' A B 20 -17.315 65.244 -30.117 1.00 34.05 O
ATOM 11 C2' A B 20 -17.588 63.693 -32.021 1.00 31.07 C
ATOM 12 O2' A B 20 -18.862 64.245 -32.260 1.00 31.84 O
ATOM 13 C1' A B 20 -16.831 63.638 -33.347 1.00 30.53 C
ATOM 14 N9 A B 20 -15.969 62.464 -33.433 1.00 28.96 N
ATOM 15 C8 A B 20 -14.608 62.394 -33.240 1.00 28.63 C
ATOM 16 N7 A B 20 -14.112 61.200 -33.424 1.00 29.09 N
ATOM 17 C5 A B 20 -15.219 60.421 -33.747 1.00 27.53 C
ATOM 18 C6 A B 20 -15.355 59.062 -34.078 1.00 28.16 C
ATOM 19 N6 A B 20 -14.328 58.215 -34.141 1.00 27.58 N
ATOM 20 N1 A B 20 -16.602 58.599 -34.348 1.00 27.53 N
ATOM 21 C2 A B 20 -17.620 59.459 -34.302 1.00 27.23 C
ATOM 22 N3 A B 20 -17.617 60.766 -34.016 1.00 27.68 N
ATOM 23 C4 A B 20 -16.371 61.186 -33.742 1.00 29.09 C
ATOM 24 P A B 21 -17.289 64.555 -28.656 1.00 35.44 P
ATOM 25 OP1 A B 21 -17.709 65.577 -27.650 1.00 37.14 O
ATOM 26 OP2 A B 21 -15.984 63.850 -28.504 1.00 35.85 O
ATOM 27 O5' A B 21 -18.392 63.408 -28.737 1.00 35.03 O
TER
Atoms:
OP1: (-23.046,54.297,-41.112)
OP2: (-20.516,54.331,-40.637)
C3': (-22.181,58.931,-40.188)
C1': (-21.283,59.508,-38.097)
C5': (-23.179,56.726,-39.362)
O6: (-15.435,58.520,-37.491)
O4': (-22.141,58.393,-37.910)
C8: (-19.527,57.705,-38.337)
C2: (-17.467,61.432,-37.300)
C6: (-16.449,59.209,-37.551)
C5: (-17.767,58.791,-37.859)
C4: (-18.787,59.717,-37.822)
P: (-21.909,54.569,-40.180)
C4': (-22.954,58.202,-39.105)
C2': (-21.664,60.149,-39.437)
O2': (-22.722,61.069,-39.205)
N1: (-16.387,60.576,-37.285)
N2: (-17.201,62.724,-37.058)
N3: (-18.719,61.040,-37.550)
N7: (-18.248,57.533,-38.205)
N9: (-19.923,59.005,-38.098)
O5': (-21.950,56.101,-39.735)
O3': (-23.026,59.325,-41.264)
OP2: (-20.516,54.331,-40.637)
C3': (-22.181,58.931,-40.188)
C1': (-21.283,59.508,-38.097)
C5': (-23.179,56.726,-39.362)
O6: (-15.435,58.520,-37.491)
O4': (-22.141,58.393,-37.910)
C8: (-19.527,57.705,-38.337)
C2: (-17.467,61.432,-37.300)
C6: (-16.449,59.209,-37.551)
C5: (-17.767,58.791,-37.859)
C4: (-18.787,59.717,-37.822)
P: (-21.909,54.569,-40.180)
C4': (-22.954,58.202,-39.105)
C2': (-21.664,60.149,-39.437)
O2': (-22.722,61.069,-39.205)
N1: (-16.387,60.576,-37.285)
N2: (-17.201,62.724,-37.058)
N3: (-18.719,61.040,-37.550)
N7: (-18.248,57.533,-38.205)
N9: (-19.923,59.005,-38.098)
O5': (-21.950,56.101,-39.735)
O3': (-23.026,59.325,-41.264)
OP1: (-12.232,66.975,-30.489)
OP2: (-11.472,64.659,-31.333)
C3': (-16.673,64.599,-31.203)
C1': (-16.831,63.638,-33.347)
C5': (-14.906,66.324,-31.901)
O4': (-16.024,64.806,-33.437)
C8: (-14.608,62.394,-33.240)
O2': (-18.862,64.245,-32.260)
C6: (-15.355,59.062,-34.078)
C5: (-15.219,60.421,-33.747)
C4: (-16.371,61.186,-33.742)
P: (-12.336,65.870,-31.481)
C4': (-16.198,65.603,-32.237)
C2': (-17.588,63.693,-32.021)
C2: (-17.620,59.459,-34.302)
N1: (-16.602,58.599,-34.348)
N3: (-17.617,60.766,-34.016)
N6: (-14.328,58.215,-34.141)
N7: (-14.112,61.200,-33.424)
N9: (-15.969,62.464,-33.433)
O5': (-13.863,65.384,-31.584)
O3': (-17.315,65.244,-30.117)
OP2: (-11.472,64.659,-31.333)
C3': (-16.673,64.599,-31.203)
C1': (-16.831,63.638,-33.347)
C5': (-14.906,66.324,-31.901)
O4': (-16.024,64.806,-33.437)
C8: (-14.608,62.394,-33.240)
O2': (-18.862,64.245,-32.260)
C6: (-15.355,59.062,-34.078)
C5: (-15.219,60.421,-33.747)
C4: (-16.371,61.186,-33.742)
P: (-12.336,65.870,-31.481)
C4': (-16.198,65.603,-32.237)
C2': (-17.588,63.693,-32.021)
C2: (-17.620,59.459,-34.302)
N1: (-16.602,58.599,-34.348)
N3: (-17.617,60.766,-34.016)
N6: (-14.328,58.215,-34.141)
N7: (-14.112,61.200,-33.424)
N9: (-15.969,62.464,-33.433)
O5': (-13.863,65.384,-31.584)
O3': (-17.315,65.244,-30.117)
Image (generated by PyMOL):