Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y6T:B3:A20
Extra
PDB:
ATOM 1 O3' U A 2 44.777 10.539 30.998 1.00 38.58 O
ATOM 2 P G A 3 46.075 10.198 30.113 1.00 39.14 P
ATOM 3 OP1 G A 3 47.144 9.832 31.080 1.00 39.44 O
ATOM 4 OP2 G A 3 46.319 11.291 29.128 1.00 39.07 O
ATOM 5 O5' G A 3 45.638 8.886 29.320 1.00 38.94 O
ATOM 6 C5' G A 3 45.336 7.674 30.038 1.00 38.71 C
ATOM 7 C4' G A 3 44.921 6.584 29.084 1.00 38.42 C
ATOM 8 O4' G A 3 43.692 6.963 28.421 1.00 38.24 O
ATOM 9 C3' G A 3 45.882 6.317 27.945 1.00 38.38 C
ATOM 10 O3' G A 3 46.905 5.445 28.354 1.00 38.61 O
ATOM 11 C2' G A 3 44.979 5.674 26.908 1.00 38.20 C
ATOM 12 O2' G A 3 44.667 4.336 27.213 1.00 38.29 O
ATOM 13 C1' G A 3 43.711 6.499 27.084 1.00 37.99 C
ATOM 14 N9 G A 3 43.694 7.665 26.217 1.00 37.39 N
ATOM 15 C8 G A 3 44.114 8.928 26.524 1.00 37.23 C
ATOM 16 N7 G A 3 43.930 9.776 25.554 1.00 37.40 N
ATOM 17 C5 G A 3 43.366 9.015 24.544 1.00 37.51 C
ATOM 18 C6 G A 3 42.940 9.384 23.239 1.00 37.58 C
ATOM 19 O6 G A 3 42.967 10.507 22.702 1.00 37.46 O
ATOM 20 N1 G A 3 42.435 8.285 22.541 1.00 37.64 N
ATOM 21 C2 G A 3 42.350 7.001 23.040 1.00 37.59 C
ATOM 22 N2 G A 3 41.837 6.073 22.224 1.00 37.66 N
ATOM 23 N3 G A 3 42.740 6.655 24.251 1.00 37.42 N
ATOM 24 C4 G A 3 43.231 7.705 24.941 1.00 37.34 C
ATOM 25 P C A 4 48.244 5.356 27.495 1.00 39.08 P
ATOM 26 OP1 C A 4 49.174 4.464 28.222 1.00 39.05 O
ATOM 27 OP2 C A 4 48.654 6.750 27.151 1.00 39.26 O
ATOM 28 O5' C A 4 47.781 4.649 26.155 1.00 38.85 O
TER
ATOM 1 O3' C B 19 37.461 4.494 16.618 1.00 37.63 O
ATOM 2 P A B 20 36.083 5.014 17.246 1.00 37.03 P
ATOM 3 OP1 A B 20 34.960 4.264 16.634 1.00 36.80 O
ATOM 4 OP2 A B 20 36.125 6.507 17.152 1.00 36.96 O
ATOM 5 O5' A B 20 36.208 4.633 18.780 1.00 35.83 O
ATOM 6 C5' A B 20 36.781 3.398 19.178 1.00 34.36 C
ATOM 7 C4' A B 20 37.120 3.441 20.648 1.00 33.70 C
ATOM 8 O4' A B 20 38.341 4.197 20.862 1.00 33.18 O
ATOM 9 C3' A B 20 36.109 4.129 21.541 1.00 33.23 C
ATOM 10 O3' A B 20 35.002 3.289 21.832 1.00 32.62 O
ATOM 11 C2' A B 20 36.952 4.442 22.769 1.00 33.31 C
ATOM 12 O2' A B 20 37.145 3.288 23.566 1.00 33.31 O
ATOM 13 C1' A B 20 38.283 4.844 22.121 1.00 32.91 C
ATOM 14 N9 A B 20 38.421 6.281 21.884 1.00 32.58 N
ATOM 15 C8 A B 20 38.083 6.985 20.748 1.00 32.47 C
ATOM 16 N7 A B 20 38.334 8.272 20.832 1.00 32.39 N
ATOM 17 C5 A B 20 38.869 8.425 22.109 1.00 32.34 C
ATOM 18 C6 A B 20 39.329 9.554 22.829 1.00 32.35 C
ATOM 19 N6 A B 20 39.314 10.808 22.357 1.00 32.11 N
ATOM 20 N1 A B 20 39.802 9.349 24.072 1.00 32.14 N
ATOM 21 C2 A B 20 39.796 8.113 24.563 1.00 32.27 C
ATOM 22 N3 A B 20 39.381 6.979 23.997 1.00 32.31 N
ATOM 23 C4 A B 20 38.927 7.206 22.761 1.00 32.22 C
ATOM 24 P A B 21 33.578 3.943 22.188 1.00 32.56 P
ATOM 25 OP1 A B 21 32.551 2.884 22.056 1.00 33.03 O
ATOM 26 OP2 A B 21 33.416 5.200 21.432 1.00 32.65 O
ATOM 27 O5' A B 21 33.721 4.326 23.726 1.00 32.23 O
TER
ATOM 2 P G A 3 46.075 10.198 30.113 1.00 39.14 P
ATOM 3 OP1 G A 3 47.144 9.832 31.080 1.00 39.44 O
ATOM 4 OP2 G A 3 46.319 11.291 29.128 1.00 39.07 O
ATOM 5 O5' G A 3 45.638 8.886 29.320 1.00 38.94 O
ATOM 6 C5' G A 3 45.336 7.674 30.038 1.00 38.71 C
ATOM 7 C4' G A 3 44.921 6.584 29.084 1.00 38.42 C
ATOM 8 O4' G A 3 43.692 6.963 28.421 1.00 38.24 O
ATOM 9 C3' G A 3 45.882 6.317 27.945 1.00 38.38 C
ATOM 10 O3' G A 3 46.905 5.445 28.354 1.00 38.61 O
ATOM 11 C2' G A 3 44.979 5.674 26.908 1.00 38.20 C
ATOM 12 O2' G A 3 44.667 4.336 27.213 1.00 38.29 O
ATOM 13 C1' G A 3 43.711 6.499 27.084 1.00 37.99 C
ATOM 14 N9 G A 3 43.694 7.665 26.217 1.00 37.39 N
ATOM 15 C8 G A 3 44.114 8.928 26.524 1.00 37.23 C
ATOM 16 N7 G A 3 43.930 9.776 25.554 1.00 37.40 N
ATOM 17 C5 G A 3 43.366 9.015 24.544 1.00 37.51 C
ATOM 18 C6 G A 3 42.940 9.384 23.239 1.00 37.58 C
ATOM 19 O6 G A 3 42.967 10.507 22.702 1.00 37.46 O
ATOM 20 N1 G A 3 42.435 8.285 22.541 1.00 37.64 N
ATOM 21 C2 G A 3 42.350 7.001 23.040 1.00 37.59 C
ATOM 22 N2 G A 3 41.837 6.073 22.224 1.00 37.66 N
ATOM 23 N3 G A 3 42.740 6.655 24.251 1.00 37.42 N
ATOM 24 C4 G A 3 43.231 7.705 24.941 1.00 37.34 C
ATOM 25 P C A 4 48.244 5.356 27.495 1.00 39.08 P
ATOM 26 OP1 C A 4 49.174 4.464 28.222 1.00 39.05 O
ATOM 27 OP2 C A 4 48.654 6.750 27.151 1.00 39.26 O
ATOM 28 O5' C A 4 47.781 4.649 26.155 1.00 38.85 O
TER
ATOM 1 O3' C B 19 37.461 4.494 16.618 1.00 37.63 O
ATOM 2 P A B 20 36.083 5.014 17.246 1.00 37.03 P
ATOM 3 OP1 A B 20 34.960 4.264 16.634 1.00 36.80 O
ATOM 4 OP2 A B 20 36.125 6.507 17.152 1.00 36.96 O
ATOM 5 O5' A B 20 36.208 4.633 18.780 1.00 35.83 O
ATOM 6 C5' A B 20 36.781 3.398 19.178 1.00 34.36 C
ATOM 7 C4' A B 20 37.120 3.441 20.648 1.00 33.70 C
ATOM 8 O4' A B 20 38.341 4.197 20.862 1.00 33.18 O
ATOM 9 C3' A B 20 36.109 4.129 21.541 1.00 33.23 C
ATOM 10 O3' A B 20 35.002 3.289 21.832 1.00 32.62 O
ATOM 11 C2' A B 20 36.952 4.442 22.769 1.00 33.31 C
ATOM 12 O2' A B 20 37.145 3.288 23.566 1.00 33.31 O
ATOM 13 C1' A B 20 38.283 4.844 22.121 1.00 32.91 C
ATOM 14 N9 A B 20 38.421 6.281 21.884 1.00 32.58 N
ATOM 15 C8 A B 20 38.083 6.985 20.748 1.00 32.47 C
ATOM 16 N7 A B 20 38.334 8.272 20.832 1.00 32.39 N
ATOM 17 C5 A B 20 38.869 8.425 22.109 1.00 32.34 C
ATOM 18 C6 A B 20 39.329 9.554 22.829 1.00 32.35 C
ATOM 19 N6 A B 20 39.314 10.808 22.357 1.00 32.11 N
ATOM 20 N1 A B 20 39.802 9.349 24.072 1.00 32.14 N
ATOM 21 C2 A B 20 39.796 8.113 24.563 1.00 32.27 C
ATOM 22 N3 A B 20 39.381 6.979 23.997 1.00 32.31 N
ATOM 23 C4 A B 20 38.927 7.206 22.761 1.00 32.22 C
ATOM 24 P A B 21 33.578 3.943 22.188 1.00 32.56 P
ATOM 25 OP1 A B 21 32.551 2.884 22.056 1.00 33.03 O
ATOM 26 OP2 A B 21 33.416 5.200 21.432 1.00 32.65 O
ATOM 27 O5' A B 21 33.721 4.326 23.726 1.00 32.23 O
TER
Atoms:
OP1: (47.144,9.832,31.080)
OP2: (46.319,11.291,29.128)
C3': (45.882,6.317,27.945)
C1': (43.711,6.499,27.084)
C5': (45.336,7.674,30.038)
O6: (42.967,10.507,22.702)
O4': (43.692,6.963,28.421)
C8: (44.114,8.928,26.524)
C2: (42.350,7.001,23.040)
C6: (42.940,9.384,23.239)
C5: (43.366,9.015,24.544)
C4: (43.231,7.705,24.941)
P: (46.075,10.198,30.113)
C4': (44.921,6.584,29.084)
C2': (44.979,5.674,26.908)
O2': (44.667,4.336,27.213)
N1: (42.435,8.285,22.541)
N2: (41.837,6.073,22.224)
N3: (42.740,6.655,24.251)
N7: (43.930,9.776,25.554)
N9: (43.694,7.665,26.217)
O5': (45.638,8.886,29.320)
O3': (46.905,5.445,28.354)
OP2: (46.319,11.291,29.128)
C3': (45.882,6.317,27.945)
C1': (43.711,6.499,27.084)
C5': (45.336,7.674,30.038)
O6: (42.967,10.507,22.702)
O4': (43.692,6.963,28.421)
C8: (44.114,8.928,26.524)
C2: (42.350,7.001,23.040)
C6: (42.940,9.384,23.239)
C5: (43.366,9.015,24.544)
C4: (43.231,7.705,24.941)
P: (46.075,10.198,30.113)
C4': (44.921,6.584,29.084)
C2': (44.979,5.674,26.908)
O2': (44.667,4.336,27.213)
N1: (42.435,8.285,22.541)
N2: (41.837,6.073,22.224)
N3: (42.740,6.655,24.251)
N7: (43.930,9.776,25.554)
N9: (43.694,7.665,26.217)
O5': (45.638,8.886,29.320)
O3': (46.905,5.445,28.354)
OP1: (34.960,4.264,16.634)
OP2: (36.125,6.507,17.152)
C3': (36.109,4.129,21.541)
C1': (38.283,4.844,22.121)
C5': (36.781,3.398,19.178)
O4': (38.341,4.197,20.862)
C8: (38.083,6.985,20.748)
O2': (37.145,3.288,23.566)
C6: (39.329,9.554,22.829)
C5: (38.869,8.425,22.109)
C4: (38.927,7.206,22.761)
P: (36.083,5.014,17.246)
C4': (37.120,3.441,20.648)
C2': (36.952,4.442,22.769)
C2: (39.796,8.113,24.563)
N1: (39.802,9.349,24.072)
N3: (39.381,6.979,23.997)
N6: (39.314,10.808,22.357)
N7: (38.334,8.272,20.832)
N9: (38.421,6.281,21.884)
O5': (36.208,4.633,18.780)
O3': (35.002,3.289,21.832)
OP2: (36.125,6.507,17.152)
C3': (36.109,4.129,21.541)
C1': (38.283,4.844,22.121)
C5': (36.781,3.398,19.178)
O4': (38.341,4.197,20.862)
C8: (38.083,6.985,20.748)
O2': (37.145,3.288,23.566)
C6: (39.329,9.554,22.829)
C5: (38.869,8.425,22.109)
C4: (38.927,7.206,22.761)
P: (36.083,5.014,17.246)
C4': (37.120,3.441,20.648)
C2': (36.952,4.442,22.769)
C2: (39.796,8.113,24.563)
N1: (39.802,9.349,24.072)
N3: (39.381,6.979,23.997)
N6: (39.314,10.808,22.357)
N7: (38.334,8.272,20.832)
N9: (38.421,6.281,21.884)
O5': (36.208,4.633,18.780)
O3': (35.002,3.289,21.832)
Image (generated by PyMOL):