Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OIJ:B3:A20
Extra
PDB:
ATOM 1 O3' U A 2 -22.188 53.536 -38.965 1.00 43.41 O
ATOM 2 P G A 3 -21.913 54.322 -40.341 1.00 40.94 P
ATOM 3 OP1 G A 3 -23.049 54.085 -41.265 1.00 40.30 O
ATOM 4 OP2 G A 3 -20.540 54.007 -40.790 1.00 40.35 O
ATOM 5 O5' G A 3 -21.912 55.853 -39.899 1.00 40.49 O
ATOM 6 C5' G A 3 -23.146 56.547 -39.659 1.00 36.62 C
ATOM 7 C4' G A 3 -22.883 58.008 -39.357 1.00 36.23 C
ATOM 8 O4' G A 3 -22.126 58.139 -38.122 1.00 32.73 O
ATOM 9 C3' G A 3 -22.047 58.748 -40.381 1.00 35.55 C
ATOM 10 O3' G A 3 -22.854 59.168 -41.469 1.00 34.20 O
ATOM 11 C2' G A 3 -21.526 59.924 -39.566 1.00 33.09 C
ATOM 12 O2' G A 3 -22.525 60.894 -39.350 1.00 31.40 O
ATOM 13 C1' G A 3 -21.251 59.252 -38.221 1.00 34.59 C
ATOM 14 N9 G A 3 -19.879 58.774 -38.127 1.00 34.63 N
ATOM 15 C8 G A 3 -19.432 57.491 -38.296 1.00 36.27 C
ATOM 16 N7 G A 3 -18.135 57.382 -38.181 1.00 35.47 N
ATOM 17 C5 G A 3 -17.708 58.670 -37.897 1.00 35.28 C
ATOM 18 C6 G A 3 -16.407 59.176 -37.651 1.00 34.22 C
ATOM 19 O6 G A 3 -15.343 58.558 -37.584 1.00 34.95 O
ATOM 20 N1 G A 3 -16.423 60.555 -37.456 1.00 34.94 N
ATOM 21 C2 G A 3 -17.551 61.337 -37.461 1.00 35.68 C
ATOM 22 N2 G A 3 -17.367 62.647 -37.272 1.00 33.76 N
ATOM 23 N3 G A 3 -18.769 60.870 -37.646 1.00 34.46 N
ATOM 24 C4 G A 3 -18.774 59.541 -37.866 1.00 35.06 C
ATOM 25 P C A 4 -22.247 59.154 -42.958 1.00 34.01 P
ATOM 26 OP1 C A 4 -23.372 59.377 -43.909 1.00 35.89 O
ATOM 27 OP2 C A 4 -21.432 57.898 -43.055 1.00 32.84 O
ATOM 28 O5' C A 4 -21.295 60.435 -42.989 1.00 32.06 O
TER
ATOM 1 O3' C B 19 -11.782 66.323 -33.008 1.00 37.41 O
ATOM 2 P A B 20 -12.151 65.598 -31.620 1.00 40.77 P
ATOM 3 OP1 A B 20 -12.129 66.635 -30.569 1.00 41.27 O
ATOM 4 OP2 A B 20 -11.325 64.378 -31.470 1.00 37.57 O
ATOM 5 O5' A B 20 -13.668 65.155 -31.837 1.00 39.70 O
ATOM 6 C5' A B 20 -14.679 66.131 -32.140 1.00 41.26 C
ATOM 7 C4' A B 20 -16.001 65.453 -32.394 1.00 41.74 C
ATOM 8 O4' A B 20 -15.916 64.647 -33.598 1.00 39.29 O
ATOM 9 C3' A B 20 -16.450 64.475 -31.328 1.00 42.10 C
ATOM 10 O3' A B 20 -17.056 65.147 -30.235 1.00 43.78 O
ATOM 11 C2' A B 20 -17.425 63.588 -32.092 1.00 42.41 C
ATOM 12 O2' A B 20 -18.697 64.184 -32.249 1.00 41.25 O
ATOM 13 C1' A B 20 -16.744 63.503 -33.463 1.00 40.93 C
ATOM 14 N9 A B 20 -15.904 62.323 -33.630 1.00 39.37 N
ATOM 15 C8 A B 20 -14.535 62.261 -33.528 1.00 37.62 C
ATOM 16 N7 A B 20 -14.044 61.065 -33.747 1.00 36.83 N
ATOM 17 C5 A B 20 -15.164 60.289 -34.008 1.00 36.92 C
ATOM 18 C6 A B 20 -15.314 58.938 -34.318 1.00 37.03 C
ATOM 19 N6 A B 20 -14.291 58.092 -34.437 1.00 37.31 N
ATOM 20 N1 A B 20 -16.564 58.474 -34.509 1.00 35.03 N
ATOM 21 C2 A B 20 -17.586 59.324 -34.398 1.00 34.88 C
ATOM 22 N3 A B 20 -17.573 60.621 -34.120 1.00 37.83 N
ATOM 23 C4 A B 20 -16.316 61.049 -33.932 1.00 37.64 C
ATOM 24 P A B 21 -17.059 64.454 -28.782 1.00 45.09 P
ATOM 25 OP1 A B 21 -17.581 65.423 -27.794 1.00 45.14 O
ATOM 26 OP2 A B 21 -15.726 63.833 -28.583 1.00 44.71 O
ATOM 27 O5' A B 21 -18.126 63.283 -28.927 1.00 46.00 O
TER
ATOM 2 P G A 3 -21.913 54.322 -40.341 1.00 40.94 P
ATOM 3 OP1 G A 3 -23.049 54.085 -41.265 1.00 40.30 O
ATOM 4 OP2 G A 3 -20.540 54.007 -40.790 1.00 40.35 O
ATOM 5 O5' G A 3 -21.912 55.853 -39.899 1.00 40.49 O
ATOM 6 C5' G A 3 -23.146 56.547 -39.659 1.00 36.62 C
ATOM 7 C4' G A 3 -22.883 58.008 -39.357 1.00 36.23 C
ATOM 8 O4' G A 3 -22.126 58.139 -38.122 1.00 32.73 O
ATOM 9 C3' G A 3 -22.047 58.748 -40.381 1.00 35.55 C
ATOM 10 O3' G A 3 -22.854 59.168 -41.469 1.00 34.20 O
ATOM 11 C2' G A 3 -21.526 59.924 -39.566 1.00 33.09 C
ATOM 12 O2' G A 3 -22.525 60.894 -39.350 1.00 31.40 O
ATOM 13 C1' G A 3 -21.251 59.252 -38.221 1.00 34.59 C
ATOM 14 N9 G A 3 -19.879 58.774 -38.127 1.00 34.63 N
ATOM 15 C8 G A 3 -19.432 57.491 -38.296 1.00 36.27 C
ATOM 16 N7 G A 3 -18.135 57.382 -38.181 1.00 35.47 N
ATOM 17 C5 G A 3 -17.708 58.670 -37.897 1.00 35.28 C
ATOM 18 C6 G A 3 -16.407 59.176 -37.651 1.00 34.22 C
ATOM 19 O6 G A 3 -15.343 58.558 -37.584 1.00 34.95 O
ATOM 20 N1 G A 3 -16.423 60.555 -37.456 1.00 34.94 N
ATOM 21 C2 G A 3 -17.551 61.337 -37.461 1.00 35.68 C
ATOM 22 N2 G A 3 -17.367 62.647 -37.272 1.00 33.76 N
ATOM 23 N3 G A 3 -18.769 60.870 -37.646 1.00 34.46 N
ATOM 24 C4 G A 3 -18.774 59.541 -37.866 1.00 35.06 C
ATOM 25 P C A 4 -22.247 59.154 -42.958 1.00 34.01 P
ATOM 26 OP1 C A 4 -23.372 59.377 -43.909 1.00 35.89 O
ATOM 27 OP2 C A 4 -21.432 57.898 -43.055 1.00 32.84 O
ATOM 28 O5' C A 4 -21.295 60.435 -42.989 1.00 32.06 O
TER
ATOM 1 O3' C B 19 -11.782 66.323 -33.008 1.00 37.41 O
ATOM 2 P A B 20 -12.151 65.598 -31.620 1.00 40.77 P
ATOM 3 OP1 A B 20 -12.129 66.635 -30.569 1.00 41.27 O
ATOM 4 OP2 A B 20 -11.325 64.378 -31.470 1.00 37.57 O
ATOM 5 O5' A B 20 -13.668 65.155 -31.837 1.00 39.70 O
ATOM 6 C5' A B 20 -14.679 66.131 -32.140 1.00 41.26 C
ATOM 7 C4' A B 20 -16.001 65.453 -32.394 1.00 41.74 C
ATOM 8 O4' A B 20 -15.916 64.647 -33.598 1.00 39.29 O
ATOM 9 C3' A B 20 -16.450 64.475 -31.328 1.00 42.10 C
ATOM 10 O3' A B 20 -17.056 65.147 -30.235 1.00 43.78 O
ATOM 11 C2' A B 20 -17.425 63.588 -32.092 1.00 42.41 C
ATOM 12 O2' A B 20 -18.697 64.184 -32.249 1.00 41.25 O
ATOM 13 C1' A B 20 -16.744 63.503 -33.463 1.00 40.93 C
ATOM 14 N9 A B 20 -15.904 62.323 -33.630 1.00 39.37 N
ATOM 15 C8 A B 20 -14.535 62.261 -33.528 1.00 37.62 C
ATOM 16 N7 A B 20 -14.044 61.065 -33.747 1.00 36.83 N
ATOM 17 C5 A B 20 -15.164 60.289 -34.008 1.00 36.92 C
ATOM 18 C6 A B 20 -15.314 58.938 -34.318 1.00 37.03 C
ATOM 19 N6 A B 20 -14.291 58.092 -34.437 1.00 37.31 N
ATOM 20 N1 A B 20 -16.564 58.474 -34.509 1.00 35.03 N
ATOM 21 C2 A B 20 -17.586 59.324 -34.398 1.00 34.88 C
ATOM 22 N3 A B 20 -17.573 60.621 -34.120 1.00 37.83 N
ATOM 23 C4 A B 20 -16.316 61.049 -33.932 1.00 37.64 C
ATOM 24 P A B 21 -17.059 64.454 -28.782 1.00 45.09 P
ATOM 25 OP1 A B 21 -17.581 65.423 -27.794 1.00 45.14 O
ATOM 26 OP2 A B 21 -15.726 63.833 -28.583 1.00 44.71 O
ATOM 27 O5' A B 21 -18.126 63.283 -28.927 1.00 46.00 O
TER
Atoms:
OP1: (-23.049,54.085,-41.265)
OP2: (-20.540,54.007,-40.790)
C3': (-22.047,58.748,-40.381)
C1': (-21.251,59.252,-38.221)
C5': (-23.146,56.547,-39.659)
O6: (-15.343,58.558,-37.584)
O4': (-22.126,58.139,-38.122)
C8: (-19.432,57.491,-38.296)
C2: (-17.551,61.337,-37.461)
C6: (-16.407,59.176,-37.651)
C5: (-17.708,58.670,-37.897)
C4: (-18.774,59.541,-37.866)
P: (-21.913,54.322,-40.341)
C4': (-22.883,58.008,-39.357)
C2': (-21.526,59.924,-39.566)
O2': (-22.525,60.894,-39.350)
N1: (-16.423,60.555,-37.456)
N2: (-17.367,62.647,-37.272)
N3: (-18.769,60.870,-37.646)
N7: (-18.135,57.382,-38.181)
N9: (-19.879,58.774,-38.127)
O5': (-21.912,55.853,-39.899)
O3': (-22.854,59.168,-41.469)
OP2: (-20.540,54.007,-40.790)
C3': (-22.047,58.748,-40.381)
C1': (-21.251,59.252,-38.221)
C5': (-23.146,56.547,-39.659)
O6: (-15.343,58.558,-37.584)
O4': (-22.126,58.139,-38.122)
C8: (-19.432,57.491,-38.296)
C2: (-17.551,61.337,-37.461)
C6: (-16.407,59.176,-37.651)
C5: (-17.708,58.670,-37.897)
C4: (-18.774,59.541,-37.866)
P: (-21.913,54.322,-40.341)
C4': (-22.883,58.008,-39.357)
C2': (-21.526,59.924,-39.566)
O2': (-22.525,60.894,-39.350)
N1: (-16.423,60.555,-37.456)
N2: (-17.367,62.647,-37.272)
N3: (-18.769,60.870,-37.646)
N7: (-18.135,57.382,-38.181)
N9: (-19.879,58.774,-38.127)
O5': (-21.912,55.853,-39.899)
O3': (-22.854,59.168,-41.469)
OP1: (-12.129,66.635,-30.569)
OP2: (-11.325,64.378,-31.470)
C3': (-16.450,64.475,-31.328)
C1': (-16.744,63.503,-33.463)
C5': (-14.679,66.131,-32.140)
O4': (-15.916,64.647,-33.598)
C8: (-14.535,62.261,-33.528)
O2': (-18.697,64.184,-32.249)
C6: (-15.314,58.938,-34.318)
C5: (-15.164,60.289,-34.008)
C4: (-16.316,61.049,-33.932)
P: (-12.151,65.598,-31.620)
C4': (-16.001,65.453,-32.394)
C2': (-17.425,63.588,-32.092)
C2: (-17.586,59.324,-34.398)
N1: (-16.564,58.474,-34.509)
N3: (-17.573,60.621,-34.120)
N6: (-14.291,58.092,-34.437)
N7: (-14.044,61.065,-33.747)
N9: (-15.904,62.323,-33.630)
O5': (-13.668,65.155,-31.837)
O3': (-17.056,65.147,-30.235)
OP2: (-11.325,64.378,-31.470)
C3': (-16.450,64.475,-31.328)
C1': (-16.744,63.503,-33.463)
C5': (-14.679,66.131,-32.140)
O4': (-15.916,64.647,-33.598)
C8: (-14.535,62.261,-33.528)
O2': (-18.697,64.184,-32.249)
C6: (-15.314,58.938,-34.318)
C5: (-15.164,60.289,-34.008)
C4: (-16.316,61.049,-33.932)
P: (-12.151,65.598,-31.620)
C4': (-16.001,65.453,-32.394)
C2': (-17.425,63.588,-32.092)
C2: (-17.586,59.324,-34.398)
N1: (-16.564,58.474,-34.509)
N3: (-17.573,60.621,-34.120)
N6: (-14.291,58.092,-34.437)
N7: (-14.044,61.065,-33.747)
N9: (-15.904,62.323,-33.630)
O5': (-13.668,65.155,-31.837)
O3': (-17.056,65.147,-30.235)
Image (generated by PyMOL):