ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BNO:B16:B14

Extra

PDB:
ATOM 1 O3' A A 15 -22.523 -8.193 6.487 1.00 98.60 O
ATOM 2 P G A 16 -21.856 -9.650 6.463 1.00 99.28 P
ATOM 3 OP1 G A 16 -22.919 -10.670 6.298 1.00 99.77 O
ATOM 4 OP2 G A 16 -20.941 -9.727 7.629 1.00101.00 O
ATOM 5 O5' G A 16 -20.990 -9.649 5.131 1.00 95.85 O
ATOM 6 C5' G A 16 -21.614 -9.660 3.856 1.00 90.90 C
ATOM 7 C4' G A 16 -20.581 -9.909 2.791 1.00 89.99 C
ATOM 8 O4' G A 16 -19.570 -8.871 2.910 1.00 89.24 O
ATOM 9 C3' G A 16 -19.812 -11.214 2.945 1.00 90.21 C
ATOM 10 O3' G A 16 -20.462 -12.290 2.286 1.00 89.05 O
ATOM 11 C2' G A 16 -18.472 -10.881 2.304 1.00 89.77 C
ATOM 12 O2' G A 16 -18.473 -10.967 0.894 1.00 90.55 O
ATOM 13 C1' G A 16 -18.281 -9.434 2.755 1.00 86.43 C
ATOM 14 N9 G A 16 -17.569 -9.318 4.024 1.00 80.76 N
ATOM 15 C8 G A 16 -18.022 -8.764 5.197 1.00 79.66 C
ATOM 16 N7 G A 16 -17.126 -8.775 6.147 1.00 78.19 N
ATOM 17 C5 G A 16 -16.022 -9.386 5.567 1.00 77.78 C
ATOM 18 C6 G A 16 -14.736 -9.679 6.105 1.00 76.96 C
ATOM 19 O6 G A 16 -14.301 -9.448 7.242 1.00 77.98 O
ATOM 20 N1 G A 16 -13.922 -10.303 5.165 1.00 77.00 N
ATOM 21 C2 G A 16 -14.295 -10.608 3.878 1.00 77.89 C
ATOM 22 N2 G A 16 -13.376 -11.200 3.116 1.00 77.91 N
ATOM 23 N3 G A 16 -15.484 -10.346 3.372 1.00 78.24 N
ATOM 24 C4 G A 16 -16.288 -9.737 4.262 1.00 78.43 C
ATOM 25 P U A 17 -20.393 -13.760 2.923 1.00 92.88 P
ATOM 26 OP1 U A 17 -21.294 -14.649 2.150 1.00 93.83 O
ATOM 27 OP2 U A 17 -20.572 -13.638 4.399 1.00 90.53 O
ATOM 28 O5' U A 17 -18.905 -14.217 2.598 1.00 92.95 O
TER

ATOM 1 O3' C B 13 -16.491 -4.441 -0.936 1.00 75.98 O
ATOM 2 P A B 14 -17.258 -5.707 -0.309 1.00 79.63 P
ATOM 3 OP1 A B 14 -16.422 -6.912 -0.548 1.00 78.35 O
ATOM 4 OP2 A B 14 -18.663 -5.695 -0.794 1.00 79.45 O
ATOM 5 O5' A B 14 -17.238 -5.375 1.250 1.00 79.29 O
ATOM 6 C5' A B 14 -18.308 -5.765 2.101 1.00 81.54 C
ATOM 7 C4' A B 14 -17.860 -5.722 3.538 1.00 81.27 C
ATOM 8 O4' A B 14 -16.804 -6.703 3.727 1.00 79.93 O
ATOM 9 C3' A B 14 -17.282 -4.391 4.003 1.00 81.65 C
ATOM 10 O3' A B 14 -17.553 -4.229 5.383 1.00 85.76 O
ATOM 11 C2' A B 14 -15.783 -4.590 3.817 1.00 81.04 C
ATOM 12 O2' A B 14 -15.027 -3.799 4.711 1.00 80.61 O
ATOM 13 C1' A B 14 -15.636 -6.061 4.193 1.00 78.60 C
ATOM 14 N9 A B 14 -14.487 -6.739 3.600 1.00 74.98 N
ATOM 15 C8 A B 14 -14.407 -7.314 2.360 1.00 73.79 C
ATOM 16 N7 A B 14 -13.263 -7.903 2.124 1.00 74.80 N
ATOM 17 C5 A B 14 -12.535 -7.693 3.285 1.00 74.84 C
ATOM 18 C6 A B 14 -11.240 -8.079 3.671 1.00 74.93 C
ATOM 19 N6 A B 14 -10.422 -8.796 2.894 1.00 75.45 N
ATOM 20 N1 A B 14 -10.810 -7.702 4.896 1.00 71.72 N
ATOM 21 C2 A B 14 -11.634 -6.990 5.670 1.00 75.63 C
ATOM 22 N3 A B 14 -12.875 -6.570 5.420 1.00 76.83 N
ATOM 23 C4 A B 14 -13.270 -6.962 4.196 1.00 75.19 C
ATOM 24 P A B 15 -18.888 -3.477 5.846 1.00 88.45 P
ATOM 25 OP1 A B 15 -19.367 -2.644 4.713 1.00 90.80 O
ATOM 26 OP2 A B 15 -18.567 -2.837 7.151 1.00 87.45 O
ATOM 27 O5' A B 15 -19.946 -4.651 6.059 1.00 90.29 O
TER

Atoms:
OP1: (-22.919,-10.670,6.298)
OP2: (-20.941,-9.727,7.629)
C3': (-19.812,-11.214,2.945)
C1': (-18.281,-9.434,2.755)
C5': (-21.614,-9.660,3.856)
O6: (-14.301,-9.448,7.242)
O4': (-19.570,-8.871,2.910)
C8: (-18.022,-8.764,5.197)
C2: (-14.295,-10.608,3.878)
C6: (-14.736,-9.679,6.105)
C5: (-16.022,-9.386,5.567)
C4: (-16.288,-9.737,4.262)
P: (-21.856,-9.650,6.463)
C4': (-20.581,-9.909,2.791)
C2': (-18.472,-10.881,2.304)
O2': (-18.473,-10.967,0.894)
N1: (-13.922,-10.303,5.165)
N2: (-13.376,-11.200,3.116)
N3: (-15.484,-10.346,3.372)
N7: (-17.126,-8.775,6.147)
N9: (-17.569,-9.318,4.024)
O5': (-20.990,-9.649,5.131)
O3': (-20.462,-12.290,2.286)
OP1: (-16.422,-6.912,-0.548)
OP2: (-18.663,-5.695,-0.794)
C3': (-17.282,-4.391,4.003)
C1': (-15.636,-6.061,4.193)
C5': (-18.308,-5.765,2.101)
O4': (-16.804,-6.703,3.727)
C8: (-14.407,-7.314,2.360)
O2': (-15.027,-3.799,4.711)
C6: (-11.240,-8.079,3.671)
C5: (-12.535,-7.693,3.285)
C4: (-13.270,-6.962,4.196)
P: (-17.258,-5.707,-0.309)
C4': (-17.860,-5.722,3.538)
C2': (-15.783,-4.590,3.817)
C2: (-11.634,-6.990,5.670)
N1: (-10.810,-7.702,4.896)
N3: (-12.875,-6.570,5.420)
N6: (-10.422,-8.796,2.894)
N7: (-13.263,-7.903,2.124)
N9: (-14.487,-6.739,3.600)
O5': (-17.238,-5.375,1.250)
O3': (-17.553,-4.229,5.383)
Image (generated by PyMOL):
PyMOL image
show in jmol