Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B12:B9
Extra
PDB:
ATOM 1 O3' C A 11 53.150 37.524 111.929 1.00 66.14 O
ATOM 2 P A A 12 54.601 37.031 112.394 1.00 67.17 P
ATOM 3 OP1 A A 12 54.416 36.073 113.507 1.00 68.22 O
ATOM 4 OP2 A A 12 55.478 38.209 112.596 1.00 67.23 O
ATOM 5 O5' A A 12 55.158 36.257 111.123 1.00 65.67 O
ATOM 6 C5' A A 12 55.027 34.835 110.996 1.00 64.83 C
ATOM 7 C4' A A 12 55.736 34.370 109.748 1.00 64.07 C
ATOM 8 O4' A A 12 54.962 34.760 108.580 1.00 63.73 O
ATOM 9 C3' A A 12 57.137 34.947 109.532 1.00 63.16 C
ATOM 10 O3' A A 12 57.938 33.977 108.852 1.00 61.35 O
ATOM 11 C2' A A 12 56.851 36.112 108.594 1.00 62.43 C
ATOM 12 O2' A A 12 57.949 36.533 107.822 1.00 63.26 O
ATOM 13 C1' A A 12 55.794 35.479 107.700 1.00 63.02 C
ATOM 14 N9 A A 12 54.987 36.427 106.941 1.00 62.27 N
ATOM 15 C8 A A 12 53.873 37.128 107.321 1.00 61.91 C
ATOM 16 N7 A A 12 53.417 37.936 106.396 1.00 60.96 N
ATOM 17 C5 A A 12 54.286 37.747 105.337 1.00 60.08 C
ATOM 18 C6 A A 12 54.366 38.332 104.075 1.00 59.92 C
ATOM 19 N6 A A 12 53.543 39.287 103.659 1.00 59.95 N
ATOM 20 N1 A A 12 55.350 37.910 103.245 1.00 60.17 N
ATOM 21 C2 A A 12 56.206 36.974 103.687 1.00 61.41 C
ATOM 22 N3 A A 12 56.242 36.366 104.864 1.00 61.65 N
ATOM 23 C4 A A 12 55.244 36.804 105.651 1.00 61.39 C
ATOM 24 P G A 13 59.360 33.546 109.462 1.00 62.54 P
ATOM 25 OP1 G A 13 59.828 32.300 108.789 1.00 62.75 O
ATOM 26 OP2 G A 13 59.230 33.579 110.935 1.00 61.12 O
ATOM 27 O5' G A 13 60.360 34.724 109.070 1.00 61.53 O
TER
ATOM 1 O3' C B 8 51.889 42.490 98.960 1.00 51.11 O
ATOM 2 P C B 9 53.230 43.417 98.891 1.00 50.40 P
ATOM 3 OP1 C B 9 52.820 44.686 99.510 1.00 52.24 O
ATOM 4 OP2 C B 9 53.863 43.443 97.541 1.00 49.02 O
ATOM 5 O5' C B 9 54.255 42.750 99.914 1.00 51.02 O
ATOM 6 C5' C B 9 53.895 42.625 101.312 1.00 53.15 C
ATOM 7 C4' C B 9 54.893 41.761 102.068 1.00 55.15 C
ATOM 8 O4' C B 9 55.073 40.499 101.360 1.00 54.95 O
ATOM 9 C3' C B 9 56.298 42.332 102.288 1.00 54.79 C
ATOM 10 O3' C B 9 56.796 41.818 103.504 1.00 55.20 O
ATOM 11 C2' C B 9 57.079 41.723 101.123 1.00 54.54 C
ATOM 12 O2' C B 9 58.491 41.598 101.313 1.00 54.91 O
ATOM 13 C1' C B 9 56.451 40.329 101.064 1.00 54.57 C
ATOM 14 N1 C B 9 56.571 39.667 99.759 1.00 52.73 N
ATOM 15 C2 C B 9 57.302 38.481 99.663 1.00 53.40 C
ATOM 16 O2 C B 9 57.803 37.991 100.690 1.00 54.52 O
ATOM 17 N3 C B 9 57.430 37.884 98.464 1.00 52.59 N
ATOM 18 C4 C B 9 56.837 38.406 97.395 1.00 50.90 C
ATOM 19 N4 C B 9 56.980 37.771 96.235 1.00 51.72 N
ATOM 20 C5 C B 9 56.070 39.601 97.467 1.00 50.95 C
ATOM 21 C6 C B 9 55.973 40.198 98.654 1.00 51.60 C
ATOM 22 P A B 10 57.098 42.786 104.759 1.00 57.84 P
ATOM 23 OP1 A B 10 55.886 43.590 105.078 1.00 57.81 O
ATOM 24 OP2 A B 10 58.391 43.461 104.503 1.00 56.85 O
ATOM 25 O5' A B 10 57.314 41.757 105.968 1.00 56.98 O
TER
ATOM 2 P A A 12 54.601 37.031 112.394 1.00 67.17 P
ATOM 3 OP1 A A 12 54.416 36.073 113.507 1.00 68.22 O
ATOM 4 OP2 A A 12 55.478 38.209 112.596 1.00 67.23 O
ATOM 5 O5' A A 12 55.158 36.257 111.123 1.00 65.67 O
ATOM 6 C5' A A 12 55.027 34.835 110.996 1.00 64.83 C
ATOM 7 C4' A A 12 55.736 34.370 109.748 1.00 64.07 C
ATOM 8 O4' A A 12 54.962 34.760 108.580 1.00 63.73 O
ATOM 9 C3' A A 12 57.137 34.947 109.532 1.00 63.16 C
ATOM 10 O3' A A 12 57.938 33.977 108.852 1.00 61.35 O
ATOM 11 C2' A A 12 56.851 36.112 108.594 1.00 62.43 C
ATOM 12 O2' A A 12 57.949 36.533 107.822 1.00 63.26 O
ATOM 13 C1' A A 12 55.794 35.479 107.700 1.00 63.02 C
ATOM 14 N9 A A 12 54.987 36.427 106.941 1.00 62.27 N
ATOM 15 C8 A A 12 53.873 37.128 107.321 1.00 61.91 C
ATOM 16 N7 A A 12 53.417 37.936 106.396 1.00 60.96 N
ATOM 17 C5 A A 12 54.286 37.747 105.337 1.00 60.08 C
ATOM 18 C6 A A 12 54.366 38.332 104.075 1.00 59.92 C
ATOM 19 N6 A A 12 53.543 39.287 103.659 1.00 59.95 N
ATOM 20 N1 A A 12 55.350 37.910 103.245 1.00 60.17 N
ATOM 21 C2 A A 12 56.206 36.974 103.687 1.00 61.41 C
ATOM 22 N3 A A 12 56.242 36.366 104.864 1.00 61.65 N
ATOM 23 C4 A A 12 55.244 36.804 105.651 1.00 61.39 C
ATOM 24 P G A 13 59.360 33.546 109.462 1.00 62.54 P
ATOM 25 OP1 G A 13 59.828 32.300 108.789 1.00 62.75 O
ATOM 26 OP2 G A 13 59.230 33.579 110.935 1.00 61.12 O
ATOM 27 O5' G A 13 60.360 34.724 109.070 1.00 61.53 O
TER
ATOM 1 O3' C B 8 51.889 42.490 98.960 1.00 51.11 O
ATOM 2 P C B 9 53.230 43.417 98.891 1.00 50.40 P
ATOM 3 OP1 C B 9 52.820 44.686 99.510 1.00 52.24 O
ATOM 4 OP2 C B 9 53.863 43.443 97.541 1.00 49.02 O
ATOM 5 O5' C B 9 54.255 42.750 99.914 1.00 51.02 O
ATOM 6 C5' C B 9 53.895 42.625 101.312 1.00 53.15 C
ATOM 7 C4' C B 9 54.893 41.761 102.068 1.00 55.15 C
ATOM 8 O4' C B 9 55.073 40.499 101.360 1.00 54.95 O
ATOM 9 C3' C B 9 56.298 42.332 102.288 1.00 54.79 C
ATOM 10 O3' C B 9 56.796 41.818 103.504 1.00 55.20 O
ATOM 11 C2' C B 9 57.079 41.723 101.123 1.00 54.54 C
ATOM 12 O2' C B 9 58.491 41.598 101.313 1.00 54.91 O
ATOM 13 C1' C B 9 56.451 40.329 101.064 1.00 54.57 C
ATOM 14 N1 C B 9 56.571 39.667 99.759 1.00 52.73 N
ATOM 15 C2 C B 9 57.302 38.481 99.663 1.00 53.40 C
ATOM 16 O2 C B 9 57.803 37.991 100.690 1.00 54.52 O
ATOM 17 N3 C B 9 57.430 37.884 98.464 1.00 52.59 N
ATOM 18 C4 C B 9 56.837 38.406 97.395 1.00 50.90 C
ATOM 19 N4 C B 9 56.980 37.771 96.235 1.00 51.72 N
ATOM 20 C5 C B 9 56.070 39.601 97.467 1.00 50.95 C
ATOM 21 C6 C B 9 55.973 40.198 98.654 1.00 51.60 C
ATOM 22 P A B 10 57.098 42.786 104.759 1.00 57.84 P
ATOM 23 OP1 A B 10 55.886 43.590 105.078 1.00 57.81 O
ATOM 24 OP2 A B 10 58.391 43.461 104.503 1.00 56.85 O
ATOM 25 O5' A B 10 57.314 41.757 105.968 1.00 56.98 O
TER
Atoms:
OP1: (54.416,36.073,113.507)
OP2: (55.478,38.209,112.596)
C3': (57.137,34.947,109.532)
C1': (55.794,35.479,107.700)
C5': (55.027,34.835,110.996)
O4': (54.962,34.760,108.580)
C8: (53.873,37.128,107.321)
O2': (57.949,36.533,107.822)
C6: (54.366,38.332,104.075)
C5: (54.286,37.747,105.337)
C4: (55.244,36.804,105.651)
P: (54.601,37.031,112.394)
C4': (55.736,34.370,109.748)
C2': (56.851,36.112,108.594)
C2: (56.206,36.974,103.687)
N1: (55.350,37.910,103.245)
N3: (56.242,36.366,104.864)
N6: (53.543,39.287,103.659)
N7: (53.417,37.936,106.396)
N9: (54.987,36.427,106.941)
O5': (55.158,36.257,111.123)
O3': (57.938,33.977,108.852)
OP2: (55.478,38.209,112.596)
C3': (57.137,34.947,109.532)
C1': (55.794,35.479,107.700)
C5': (55.027,34.835,110.996)
O4': (54.962,34.760,108.580)
C8: (53.873,37.128,107.321)
O2': (57.949,36.533,107.822)
C6: (54.366,38.332,104.075)
C5: (54.286,37.747,105.337)
C4: (55.244,36.804,105.651)
P: (54.601,37.031,112.394)
C4': (55.736,34.370,109.748)
C2': (56.851,36.112,108.594)
C2: (56.206,36.974,103.687)
N1: (55.350,37.910,103.245)
N3: (56.242,36.366,104.864)
N6: (53.543,39.287,103.659)
N7: (53.417,37.936,106.396)
N9: (54.987,36.427,106.941)
O5': (55.158,36.257,111.123)
O3': (57.938,33.977,108.852)
C2: (57.302,38.481,99.663)
OP1: (52.820,44.686,99.510)
OP2: (53.863,43.443,97.541)
C4: (56.837,38.406,97.395)
O5': (54.255,42.750,99.914)
C3': (56.298,42.332,102.288)
C1': (56.451,40.329,101.064)
O4': (55.073,40.499,101.360)
C5': (53.895,42.625,101.312)
P: (53.230,43.417,98.891)
O2: (57.803,37.991,100.690)
C4': (54.893,41.761,102.068)
C2': (57.079,41.723,101.123)
O2': (58.491,41.598,101.313)
N1: (56.571,39.667,99.759)
N3: (57.430,37.884,98.464)
N4: (56.980,37.771,96.235)
C6: (55.973,40.198,98.654)
C5: (56.070,39.601,97.467)
O3': (56.796,41.818,103.504)
OP1: (52.820,44.686,99.510)
OP2: (53.863,43.443,97.541)
C4: (56.837,38.406,97.395)
O5': (54.255,42.750,99.914)
C3': (56.298,42.332,102.288)
C1': (56.451,40.329,101.064)
O4': (55.073,40.499,101.360)
C5': (53.895,42.625,101.312)
P: (53.230,43.417,98.891)
O2: (57.803,37.991,100.690)
C4': (54.893,41.761,102.068)
C2': (57.079,41.723,101.123)
O2': (58.491,41.598,101.313)
N1: (56.571,39.667,99.759)
N3: (57.430,37.884,98.464)
N4: (56.980,37.771,96.235)
C6: (55.973,40.198,98.654)
C5: (56.070,39.601,97.467)
O3': (56.796,41.818,103.504)
Image (generated by PyMOL):