Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNQ:C18:C16
Extra
PDB:
ATOM 1 O3' A A 17 -36.192 21.077 18.601 1.00 52.22 O
ATOM 2 P G A 18 -34.869 21.480 19.419 1.00 51.51 P
ATOM 3 OP1 G A 18 -35.127 22.759 20.124 1.00 52.12 O
ATOM 4 OP2 G A 18 -33.731 21.388 18.469 1.00 44.98 O
ATOM 5 O5' G A 18 -34.734 20.335 20.517 1.00 45.13 O
ATOM 6 C5' G A 18 -35.725 20.166 21.525 1.00 42.42 C
ATOM 7 C4' G A 18 -35.264 19.146 22.538 1.00 42.15 C
ATOM 8 O4' G A 18 -35.044 17.875 21.862 1.00 43.71 O
ATOM 9 C3' G A 18 -33.929 19.446 23.206 1.00 39.70 C
ATOM 10 O3' G A 18 -34.101 20.263 24.352 1.00 40.48 O
ATOM 11 C2' G A 18 -33.460 18.061 23.614 1.00 37.86 C
ATOM 12 O2' G A 18 -34.070 17.607 24.803 1.00 38.26 O
ATOM 13 C1' G A 18 -33.901 17.233 22.407 1.00 37.05 C
ATOM 14 N9 G A 18 -32.864 17.184 21.381 1.00 32.49 N
ATOM 15 C8 G A 18 -32.893 17.752 20.130 1.00 31.01 C
ATOM 16 N7 G A 18 -31.801 17.535 19.443 1.00 32.95 N
ATOM 17 C5 G A 18 -31.006 16.773 20.292 1.00 34.04 C
ATOM 18 C6 G A 18 -29.705 16.246 20.105 1.00 34.01 C
ATOM 19 O6 G A 18 -28.988 16.309 19.098 1.00 31.70 O
ATOM 20 N1 G A 18 -29.252 15.582 21.244 1.00 29.62 N
ATOM 21 C2 G A 18 -29.970 15.427 22.405 1.00 33.29 C
ATOM 22 N2 G A 18 -29.364 14.767 23.408 1.00 23.71 N
ATOM 23 N3 G A 18 -31.196 15.891 22.578 1.00 31.76 N
ATOM 24 C4 G A 18 -31.645 16.553 21.493 1.00 30.43 C
ATOM 25 P U A 19 -32.978 21.346 24.725 1.00 38.51 P
ATOM 26 OP1 U A 19 -33.426 22.017 25.970 1.00 43.25 O
ATOM 27 OP2 U A 19 -32.679 22.162 23.518 1.00 36.86 O
ATOM 28 O5' U A 19 -31.688 20.470 25.047 1.00 38.24 O
TER
ATOM 1 O3' C B 15 -37.502 11.807 21.826 1.00 49.20 O
ATOM 2 P A B 16 -37.191 13.379 21.952 1.00 51.36 P
ATOM 3 OP1 A B 16 -36.041 13.556 22.876 1.00 55.40 O
ATOM 4 OP2 A B 16 -38.468 14.083 22.232 1.00 52.69 O
ATOM 5 O5' A B 16 -36.722 13.805 20.495 1.00 50.87 O
ATOM 6 C5' A B 16 -36.700 15.173 20.112 1.00 48.07 C
ATOM 7 C4' A B 16 -35.555 15.422 19.169 1.00 48.23 C
ATOM 8 O4' A B 16 -34.306 15.254 19.896 1.00 46.44 O
ATOM 9 C3' A B 16 -35.487 14.471 17.978 1.00 46.96 C
ATOM 10 O3' A B 16 -34.996 15.159 16.835 1.00 52.00 O
ATOM 11 C2' A B 16 -34.479 13.427 18.446 1.00 46.11 C
ATOM 12 O2' A B 16 -33.810 12.769 17.392 1.00 38.53 O
ATOM 13 C1' A B 16 -33.504 14.294 19.241 1.00 43.87 C
ATOM 14 N9 A B 16 -32.773 13.549 20.261 1.00 39.85 N
ATOM 15 C8 A B 16 -33.244 13.093 21.465 1.00 40.01 C
ATOM 16 N7 A B 16 -32.348 12.457 22.176 1.00 39.62 N
ATOM 17 C5 A B 16 -31.209 12.496 21.388 1.00 38.13 C
ATOM 18 C6 A B 16 -29.909 11.999 21.582 1.00 39.63 C
ATOM 19 N6 A B 16 -29.521 11.349 22.685 1.00 43.31 N
ATOM 20 N1 A B 16 -29.008 12.196 20.595 1.00 36.07 N
ATOM 21 C2 A B 16 -29.395 12.860 19.501 1.00 40.40 C
ATOM 22 N3 A B 16 -30.587 13.386 19.208 1.00 40.12 N
ATOM 23 C4 A B 16 -31.458 13.164 20.204 1.00 37.96 C
ATOM 24 P A B 17 -36.028 15.895 15.850 1.00 53.67 P
ATOM 25 OP1 A B 17 -37.336 15.203 15.947 1.00 49.90 O
ATOM 26 OP2 A B 17 -35.371 16.048 14.525 1.00 53.99 O
ATOM 27 O5' A B 17 -36.186 17.342 16.493 1.00 53.30 O
TER
ATOM 2 P G A 18 -34.869 21.480 19.419 1.00 51.51 P
ATOM 3 OP1 G A 18 -35.127 22.759 20.124 1.00 52.12 O
ATOM 4 OP2 G A 18 -33.731 21.388 18.469 1.00 44.98 O
ATOM 5 O5' G A 18 -34.734 20.335 20.517 1.00 45.13 O
ATOM 6 C5' G A 18 -35.725 20.166 21.525 1.00 42.42 C
ATOM 7 C4' G A 18 -35.264 19.146 22.538 1.00 42.15 C
ATOM 8 O4' G A 18 -35.044 17.875 21.862 1.00 43.71 O
ATOM 9 C3' G A 18 -33.929 19.446 23.206 1.00 39.70 C
ATOM 10 O3' G A 18 -34.101 20.263 24.352 1.00 40.48 O
ATOM 11 C2' G A 18 -33.460 18.061 23.614 1.00 37.86 C
ATOM 12 O2' G A 18 -34.070 17.607 24.803 1.00 38.26 O
ATOM 13 C1' G A 18 -33.901 17.233 22.407 1.00 37.05 C
ATOM 14 N9 G A 18 -32.864 17.184 21.381 1.00 32.49 N
ATOM 15 C8 G A 18 -32.893 17.752 20.130 1.00 31.01 C
ATOM 16 N7 G A 18 -31.801 17.535 19.443 1.00 32.95 N
ATOM 17 C5 G A 18 -31.006 16.773 20.292 1.00 34.04 C
ATOM 18 C6 G A 18 -29.705 16.246 20.105 1.00 34.01 C
ATOM 19 O6 G A 18 -28.988 16.309 19.098 1.00 31.70 O
ATOM 20 N1 G A 18 -29.252 15.582 21.244 1.00 29.62 N
ATOM 21 C2 G A 18 -29.970 15.427 22.405 1.00 33.29 C
ATOM 22 N2 G A 18 -29.364 14.767 23.408 1.00 23.71 N
ATOM 23 N3 G A 18 -31.196 15.891 22.578 1.00 31.76 N
ATOM 24 C4 G A 18 -31.645 16.553 21.493 1.00 30.43 C
ATOM 25 P U A 19 -32.978 21.346 24.725 1.00 38.51 P
ATOM 26 OP1 U A 19 -33.426 22.017 25.970 1.00 43.25 O
ATOM 27 OP2 U A 19 -32.679 22.162 23.518 1.00 36.86 O
ATOM 28 O5' U A 19 -31.688 20.470 25.047 1.00 38.24 O
TER
ATOM 1 O3' C B 15 -37.502 11.807 21.826 1.00 49.20 O
ATOM 2 P A B 16 -37.191 13.379 21.952 1.00 51.36 P
ATOM 3 OP1 A B 16 -36.041 13.556 22.876 1.00 55.40 O
ATOM 4 OP2 A B 16 -38.468 14.083 22.232 1.00 52.69 O
ATOM 5 O5' A B 16 -36.722 13.805 20.495 1.00 50.87 O
ATOM 6 C5' A B 16 -36.700 15.173 20.112 1.00 48.07 C
ATOM 7 C4' A B 16 -35.555 15.422 19.169 1.00 48.23 C
ATOM 8 O4' A B 16 -34.306 15.254 19.896 1.00 46.44 O
ATOM 9 C3' A B 16 -35.487 14.471 17.978 1.00 46.96 C
ATOM 10 O3' A B 16 -34.996 15.159 16.835 1.00 52.00 O
ATOM 11 C2' A B 16 -34.479 13.427 18.446 1.00 46.11 C
ATOM 12 O2' A B 16 -33.810 12.769 17.392 1.00 38.53 O
ATOM 13 C1' A B 16 -33.504 14.294 19.241 1.00 43.87 C
ATOM 14 N9 A B 16 -32.773 13.549 20.261 1.00 39.85 N
ATOM 15 C8 A B 16 -33.244 13.093 21.465 1.00 40.01 C
ATOM 16 N7 A B 16 -32.348 12.457 22.176 1.00 39.62 N
ATOM 17 C5 A B 16 -31.209 12.496 21.388 1.00 38.13 C
ATOM 18 C6 A B 16 -29.909 11.999 21.582 1.00 39.63 C
ATOM 19 N6 A B 16 -29.521 11.349 22.685 1.00 43.31 N
ATOM 20 N1 A B 16 -29.008 12.196 20.595 1.00 36.07 N
ATOM 21 C2 A B 16 -29.395 12.860 19.501 1.00 40.40 C
ATOM 22 N3 A B 16 -30.587 13.386 19.208 1.00 40.12 N
ATOM 23 C4 A B 16 -31.458 13.164 20.204 1.00 37.96 C
ATOM 24 P A B 17 -36.028 15.895 15.850 1.00 53.67 P
ATOM 25 OP1 A B 17 -37.336 15.203 15.947 1.00 49.90 O
ATOM 26 OP2 A B 17 -35.371 16.048 14.525 1.00 53.99 O
ATOM 27 O5' A B 17 -36.186 17.342 16.493 1.00 53.30 O
TER
Atoms:
OP1: (-35.127,22.759,20.124)
OP2: (-33.731,21.388,18.469)
C3': (-33.929,19.446,23.206)
C1': (-33.901,17.233,22.407)
C5': (-35.725,20.166,21.525)
O6: (-28.988,16.309,19.098)
O4': (-35.044,17.875,21.862)
C8: (-32.893,17.752,20.130)
C2: (-29.970,15.427,22.405)
C6: (-29.705,16.246,20.105)
C5: (-31.006,16.773,20.292)
C4: (-31.645,16.553,21.493)
P: (-34.869,21.480,19.419)
C4': (-35.264,19.146,22.538)
C2': (-33.460,18.061,23.614)
O2': (-34.070,17.607,24.803)
N1: (-29.252,15.582,21.244)
N2: (-29.364,14.767,23.408)
N3: (-31.196,15.891,22.578)
N7: (-31.801,17.535,19.443)
N9: (-32.864,17.184,21.381)
O5': (-34.734,20.335,20.517)
O3': (-34.101,20.263,24.352)
OP2: (-33.731,21.388,18.469)
C3': (-33.929,19.446,23.206)
C1': (-33.901,17.233,22.407)
C5': (-35.725,20.166,21.525)
O6: (-28.988,16.309,19.098)
O4': (-35.044,17.875,21.862)
C8: (-32.893,17.752,20.130)
C2: (-29.970,15.427,22.405)
C6: (-29.705,16.246,20.105)
C5: (-31.006,16.773,20.292)
C4: (-31.645,16.553,21.493)
P: (-34.869,21.480,19.419)
C4': (-35.264,19.146,22.538)
C2': (-33.460,18.061,23.614)
O2': (-34.070,17.607,24.803)
N1: (-29.252,15.582,21.244)
N2: (-29.364,14.767,23.408)
N3: (-31.196,15.891,22.578)
N7: (-31.801,17.535,19.443)
N9: (-32.864,17.184,21.381)
O5': (-34.734,20.335,20.517)
O3': (-34.101,20.263,24.352)
OP1: (-36.041,13.556,22.876)
OP2: (-38.468,14.083,22.232)
C3': (-35.487,14.471,17.978)
C1': (-33.504,14.294,19.241)
C5': (-36.700,15.173,20.112)
O4': (-34.306,15.254,19.896)
C8: (-33.244,13.093,21.465)
O2': (-33.810,12.769,17.392)
C6: (-29.909,11.999,21.582)
C5: (-31.209,12.496,21.388)
C4: (-31.458,13.164,20.204)
P: (-37.191,13.379,21.952)
C4': (-35.555,15.422,19.169)
C2': (-34.479,13.427,18.446)
C2: (-29.395,12.860,19.501)
N1: (-29.008,12.196,20.595)
N3: (-30.587,13.386,19.208)
N6: (-29.521,11.349,22.685)
N7: (-32.348,12.457,22.176)
N9: (-32.773,13.549,20.261)
O5': (-36.722,13.805,20.495)
O3': (-34.996,15.159,16.835)
OP2: (-38.468,14.083,22.232)
C3': (-35.487,14.471,17.978)
C1': (-33.504,14.294,19.241)
C5': (-36.700,15.173,20.112)
O4': (-34.306,15.254,19.896)
C8: (-33.244,13.093,21.465)
O2': (-33.810,12.769,17.392)
C6: (-29.909,11.999,21.582)
C5: (-31.209,12.496,21.388)
C4: (-31.458,13.164,20.204)
P: (-37.191,13.379,21.952)
C4': (-35.555,15.422,19.169)
C2': (-34.479,13.427,18.446)
C2: (-29.395,12.860,19.501)
N1: (-29.008,12.196,20.595)
N3: (-30.587,13.386,19.208)
N6: (-29.521,11.349,22.685)
N7: (-32.348,12.457,22.176)
N9: (-32.773,13.549,20.261)
O5': (-36.722,13.805,20.495)
O3': (-34.996,15.159,16.835)
Image (generated by PyMOL):