Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A565:A561
Extra
PDB:
ATOM 1 O3' G A 564 -65.784 40.702 -38.121 1.00 9.79 O
ATOM 2 P G A 565 -65.548 41.486 -36.736 1.00 22.64 P
ATOM 3 OP1 G A 565 -65.790 42.923 -37.008 1.00 22.64 O
ATOM 4 OP2 G A 565 -64.212 41.067 -36.206 1.00 22.64 O
ATOM 5 O5' G A 565 -66.709 40.913 -35.802 1.00 22.64 O
ATOM 6 C5' G A 565 -68.025 40.712 -36.296 1.00 22.64 C
ATOM 7 C4' G A 565 -68.890 40.047 -35.263 1.00 22.64 C
ATOM 8 O4' G A 565 -68.767 38.610 -35.362 1.00 22.64 O
ATOM 9 C3' G A 565 -68.525 40.340 -33.835 1.00 22.64 C
ATOM 10 O3' G A 565 -69.032 41.570 -33.404 1.00 22.64 O
ATOM 11 C2' G A 565 -69.109 39.158 -33.088 1.00 22.64 C
ATOM 12 O2' G A 565 -70.495 39.344 -32.870 1.00 22.64 O
ATOM 13 C1' G A 565 -68.919 38.028 -34.094 1.00 22.64 C
ATOM 14 N9 G A 565 -67.723 37.229 -33.807 1.00 22.93 N
ATOM 15 C8 G A 565 -66.495 37.381 -34.392 1.00 22.93 C
ATOM 16 N7 G A 565 -65.608 36.536 -33.945 1.00 22.93 N
ATOM 17 C5 G A 565 -66.296 35.772 -33.019 1.00 22.93 C
ATOM 18 C6 G A 565 -65.840 34.690 -32.224 1.00 22.93 C
ATOM 19 O6 G A 565 -64.717 34.189 -32.178 1.00 22.93 O
ATOM 20 N1 G A 565 -66.846 34.176 -31.419 1.00 22.93 N
ATOM 21 C2 G A 565 -68.138 34.648 -31.390 1.00 22.93 C
ATOM 22 N2 G A 565 -68.936 33.990 -30.530 1.00 22.93 N
ATOM 23 N3 G A 565 -68.589 35.672 -32.127 1.00 22.93 N
ATOM 24 C4 G A 565 -67.613 36.183 -32.920 1.00 22.93 C
ATOM 25 P G A 566 -68.730 42.070 -31.917 1.00 15.24 P
ATOM 26 OP1 G A 566 -69.427 43.368 -31.747 1.00 15.24 O
ATOM 27 OP2 G A 566 -67.248 42.021 -31.722 1.00 15.24 O
ATOM 28 O5' G A 566 -69.431 40.950 -31.025 1.00 15.24 O
TER
ATOM 1 O3' U B 560 -65.510 30.881 -39.854 1.00 17.95 O
ATOM 2 P A B 561 -65.290 32.037 -40.964 1.00 13.86 P
ATOM 3 OP1 A B 561 -66.376 31.897 -41.983 1.00 13.86 O
ATOM 4 OP2 A B 561 -63.881 31.940 -41.415 1.00 13.86 O
ATOM 5 O5' A B 561 -65.494 33.374 -40.124 1.00 13.86 O
ATOM 6 C5' A B 561 -65.624 34.619 -40.780 1.00 13.86 C
ATOM 7 C4' A B 561 -65.818 35.754 -39.801 1.00 13.86 C
ATOM 8 O4' A B 561 -67.131 35.705 -39.220 1.00 13.86 O
ATOM 9 C3' A B 561 -64.872 35.812 -38.603 1.00 13.86 C
ATOM 10 O3' A B 561 -63.664 36.488 -38.906 1.00 13.86 O
ATOM 11 C2' A B 561 -65.684 36.552 -37.533 1.00 13.86 C
ATOM 12 O2' A B 561 -65.286 37.911 -37.456 1.00 13.86 O
ATOM 13 C1' A B 561 -67.127 36.472 -38.051 1.00 13.86 C
ATOM 14 N9 A B 561 -68.038 35.872 -37.082 1.00 14.24 N
ATOM 15 C8 A B 561 -69.303 36.315 -36.801 1.00 14.24 C
ATOM 16 N7 A B 561 -69.938 35.611 -35.902 1.00 14.24 N
ATOM 17 C5 A B 561 -69.009 34.635 -35.577 1.00 14.24 C
ATOM 18 C6 A B 561 -69.070 33.576 -34.666 1.00 14.24 C
ATOM 19 N6 A B 561 -70.155 33.360 -33.918 1.00 14.24 N
ATOM 20 N1 A B 561 -67.967 32.773 -34.568 1.00 14.24 N
ATOM 21 C2 A B 561 -66.883 33.023 -35.325 1.00 14.24 C
ATOM 22 N3 A B 561 -66.710 34.000 -36.218 1.00 14.24 N
ATOM 23 C4 A B 561 -67.822 34.777 -36.295 1.00 14.24 C
ATOM 24 P C B 562 -62.242 35.819 -38.620 1.00 20.38 P
ATOM 25 OP1 C B 562 -62.213 34.521 -39.346 1.00 20.38 O
ATOM 26 OP2 C B 562 -62.039 35.831 -37.157 1.00 20.38 O
ATOM 27 O5' C B 562 -61.252 36.854 -39.306 1.00 20.38 O
TER
ATOM 2 P G A 565 -65.548 41.486 -36.736 1.00 22.64 P
ATOM 3 OP1 G A 565 -65.790 42.923 -37.008 1.00 22.64 O
ATOM 4 OP2 G A 565 -64.212 41.067 -36.206 1.00 22.64 O
ATOM 5 O5' G A 565 -66.709 40.913 -35.802 1.00 22.64 O
ATOM 6 C5' G A 565 -68.025 40.712 -36.296 1.00 22.64 C
ATOM 7 C4' G A 565 -68.890 40.047 -35.263 1.00 22.64 C
ATOM 8 O4' G A 565 -68.767 38.610 -35.362 1.00 22.64 O
ATOM 9 C3' G A 565 -68.525 40.340 -33.835 1.00 22.64 C
ATOM 10 O3' G A 565 -69.032 41.570 -33.404 1.00 22.64 O
ATOM 11 C2' G A 565 -69.109 39.158 -33.088 1.00 22.64 C
ATOM 12 O2' G A 565 -70.495 39.344 -32.870 1.00 22.64 O
ATOM 13 C1' G A 565 -68.919 38.028 -34.094 1.00 22.64 C
ATOM 14 N9 G A 565 -67.723 37.229 -33.807 1.00 22.93 N
ATOM 15 C8 G A 565 -66.495 37.381 -34.392 1.00 22.93 C
ATOM 16 N7 G A 565 -65.608 36.536 -33.945 1.00 22.93 N
ATOM 17 C5 G A 565 -66.296 35.772 -33.019 1.00 22.93 C
ATOM 18 C6 G A 565 -65.840 34.690 -32.224 1.00 22.93 C
ATOM 19 O6 G A 565 -64.717 34.189 -32.178 1.00 22.93 O
ATOM 20 N1 G A 565 -66.846 34.176 -31.419 1.00 22.93 N
ATOM 21 C2 G A 565 -68.138 34.648 -31.390 1.00 22.93 C
ATOM 22 N2 G A 565 -68.936 33.990 -30.530 1.00 22.93 N
ATOM 23 N3 G A 565 -68.589 35.672 -32.127 1.00 22.93 N
ATOM 24 C4 G A 565 -67.613 36.183 -32.920 1.00 22.93 C
ATOM 25 P G A 566 -68.730 42.070 -31.917 1.00 15.24 P
ATOM 26 OP1 G A 566 -69.427 43.368 -31.747 1.00 15.24 O
ATOM 27 OP2 G A 566 -67.248 42.021 -31.722 1.00 15.24 O
ATOM 28 O5' G A 566 -69.431 40.950 -31.025 1.00 15.24 O
TER
ATOM 1 O3' U B 560 -65.510 30.881 -39.854 1.00 17.95 O
ATOM 2 P A B 561 -65.290 32.037 -40.964 1.00 13.86 P
ATOM 3 OP1 A B 561 -66.376 31.897 -41.983 1.00 13.86 O
ATOM 4 OP2 A B 561 -63.881 31.940 -41.415 1.00 13.86 O
ATOM 5 O5' A B 561 -65.494 33.374 -40.124 1.00 13.86 O
ATOM 6 C5' A B 561 -65.624 34.619 -40.780 1.00 13.86 C
ATOM 7 C4' A B 561 -65.818 35.754 -39.801 1.00 13.86 C
ATOM 8 O4' A B 561 -67.131 35.705 -39.220 1.00 13.86 O
ATOM 9 C3' A B 561 -64.872 35.812 -38.603 1.00 13.86 C
ATOM 10 O3' A B 561 -63.664 36.488 -38.906 1.00 13.86 O
ATOM 11 C2' A B 561 -65.684 36.552 -37.533 1.00 13.86 C
ATOM 12 O2' A B 561 -65.286 37.911 -37.456 1.00 13.86 O
ATOM 13 C1' A B 561 -67.127 36.472 -38.051 1.00 13.86 C
ATOM 14 N9 A B 561 -68.038 35.872 -37.082 1.00 14.24 N
ATOM 15 C8 A B 561 -69.303 36.315 -36.801 1.00 14.24 C
ATOM 16 N7 A B 561 -69.938 35.611 -35.902 1.00 14.24 N
ATOM 17 C5 A B 561 -69.009 34.635 -35.577 1.00 14.24 C
ATOM 18 C6 A B 561 -69.070 33.576 -34.666 1.00 14.24 C
ATOM 19 N6 A B 561 -70.155 33.360 -33.918 1.00 14.24 N
ATOM 20 N1 A B 561 -67.967 32.773 -34.568 1.00 14.24 N
ATOM 21 C2 A B 561 -66.883 33.023 -35.325 1.00 14.24 C
ATOM 22 N3 A B 561 -66.710 34.000 -36.218 1.00 14.24 N
ATOM 23 C4 A B 561 -67.822 34.777 -36.295 1.00 14.24 C
ATOM 24 P C B 562 -62.242 35.819 -38.620 1.00 20.38 P
ATOM 25 OP1 C B 562 -62.213 34.521 -39.346 1.00 20.38 O
ATOM 26 OP2 C B 562 -62.039 35.831 -37.157 1.00 20.38 O
ATOM 27 O5' C B 562 -61.252 36.854 -39.306 1.00 20.38 O
TER
Atoms:
OP1: (-65.790,42.923,-37.008)
OP2: (-64.212,41.067,-36.206)
C3': (-68.525,40.340,-33.835)
C1': (-68.919,38.028,-34.094)
C5': (-68.025,40.712,-36.296)
O6: (-64.717,34.189,-32.178)
O4': (-68.767,38.610,-35.362)
C8: (-66.495,37.381,-34.392)
C2: (-68.138,34.648,-31.390)
C6: (-65.840,34.690,-32.224)
C5: (-66.296,35.772,-33.019)
C4: (-67.613,36.183,-32.920)
P: (-65.548,41.486,-36.736)
C4': (-68.890,40.047,-35.263)
C2': (-69.109,39.158,-33.088)
O2': (-70.495,39.344,-32.870)
N1: (-66.846,34.176,-31.419)
N2: (-68.936,33.990,-30.530)
N3: (-68.589,35.672,-32.127)
N7: (-65.608,36.536,-33.945)
N9: (-67.723,37.229,-33.807)
O5': (-66.709,40.913,-35.802)
O3': (-69.032,41.570,-33.404)
OP2: (-64.212,41.067,-36.206)
C3': (-68.525,40.340,-33.835)
C1': (-68.919,38.028,-34.094)
C5': (-68.025,40.712,-36.296)
O6: (-64.717,34.189,-32.178)
O4': (-68.767,38.610,-35.362)
C8: (-66.495,37.381,-34.392)
C2: (-68.138,34.648,-31.390)
C6: (-65.840,34.690,-32.224)
C5: (-66.296,35.772,-33.019)
C4: (-67.613,36.183,-32.920)
P: (-65.548,41.486,-36.736)
C4': (-68.890,40.047,-35.263)
C2': (-69.109,39.158,-33.088)
O2': (-70.495,39.344,-32.870)
N1: (-66.846,34.176,-31.419)
N2: (-68.936,33.990,-30.530)
N3: (-68.589,35.672,-32.127)
N7: (-65.608,36.536,-33.945)
N9: (-67.723,37.229,-33.807)
O5': (-66.709,40.913,-35.802)
O3': (-69.032,41.570,-33.404)
OP1: (-66.376,31.897,-41.983)
OP2: (-63.881,31.940,-41.415)
C3': (-64.872,35.812,-38.603)
C1': (-67.127,36.472,-38.051)
C5': (-65.624,34.619,-40.780)
O4': (-67.131,35.705,-39.220)
C8: (-69.303,36.315,-36.801)
O2': (-65.286,37.911,-37.456)
C6: (-69.070,33.576,-34.666)
C5: (-69.009,34.635,-35.577)
C4: (-67.822,34.777,-36.295)
P: (-65.290,32.037,-40.964)
C4': (-65.818,35.754,-39.801)
C2': (-65.684,36.552,-37.533)
C2: (-66.883,33.023,-35.325)
N1: (-67.967,32.773,-34.568)
N3: (-66.710,34.000,-36.218)
N6: (-70.155,33.360,-33.918)
N7: (-69.938,35.611,-35.902)
N9: (-68.038,35.872,-37.082)
O5': (-65.494,33.374,-40.124)
O3': (-63.664,36.488,-38.906)
OP2: (-63.881,31.940,-41.415)
C3': (-64.872,35.812,-38.603)
C1': (-67.127,36.472,-38.051)
C5': (-65.624,34.619,-40.780)
O4': (-67.131,35.705,-39.220)
C8: (-69.303,36.315,-36.801)
O2': (-65.286,37.911,-37.456)
C6: (-69.070,33.576,-34.666)
C5: (-69.009,34.635,-35.577)
C4: (-67.822,34.777,-36.295)
P: (-65.290,32.037,-40.964)
C4': (-65.818,35.754,-39.801)
C2': (-65.684,36.552,-37.533)
C2: (-66.883,33.023,-35.325)
N1: (-67.967,32.773,-34.568)
N3: (-66.710,34.000,-36.218)
N6: (-70.155,33.360,-33.918)
N7: (-69.938,35.611,-35.902)
N9: (-68.038,35.872,-37.082)
O5': (-65.494,33.374,-40.124)
O3': (-63.664,36.488,-38.906)
Image (generated by PyMOL):