ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02043:02453

Extra

PDB:
ATOM 1 O3' A A2042 54.046 126.635 101.121 1.00 31.30 O
ATOM 2 P G A2043 54.922 127.376 100.006 1.00 33.82 P
ATOM 3 OP1 G A2043 54.874 126.602 98.745 1.00 33.18 O
ATOM 4 OP2 G A2043 56.232 127.691 100.615 1.00 34.52 O
ATOM 5 O5' G A2043 54.131 128.743 99.791 1.00 33.15 O
ATOM 6 C5' G A2043 52.684 128.763 99.791 1.00 32.91 C
ATOM 7 C4' G A2043 52.164 130.099 99.311 1.00 32.51 C
ATOM 8 O4' G A2043 52.547 131.131 100.250 1.00 33.06 O
ATOM 9 C3' G A2043 52.689 130.578 97.969 1.00 31.35 C
ATOM 10 O3' G A2043 51.930 130.023 96.906 1.00 33.07 O
ATOM 11 C2' G A2043 52.530 132.088 98.075 1.00 32.58 C
ATOM 12 O2' G A2043 51.214 132.542 97.851 1.00 34.96 O
ATOM 13 C1' G A2043 52.869 132.321 99.548 1.00 34.01 C
ATOM 14 N9 G A2043 54.285 132.600 99.759 1.00 35.17 N
ATOM 15 C8 G A2043 55.152 131.936 100.599 1.00 35.24 C
ATOM 16 N7 G A2043 56.371 132.397 100.545 1.00 34.91 N
ATOM 17 C5 G A2043 56.306 133.430 99.619 1.00 35.27 C
ATOM 18 C6 G A2043 57.314 134.290 99.141 1.00 35.09 C
ATOM 19 O6 G A2043 58.510 134.315 99.447 1.00 35.16 O
ATOM 20 N1 G A2043 56.813 135.196 98.208 1.00 35.19 N
ATOM 21 C2 G A2043 55.507 135.264 97.793 1.00 34.99 C
ATOM 22 N2 G A2043 55.215 136.211 96.902 1.00 34.97 N
ATOM 23 N3 G A2043 54.556 134.462 98.228 1.00 36.19 N
ATOM 24 C4 G A2043 55.023 133.574 99.133 1.00 35.87 C
ATOM 25 P C A2044 52.636 129.706 95.499 1.00 35.53 P
ATOM 26 OP1 C A2044 51.599 129.139 94.629 1.00 36.00 O
ATOM 27 OP2 C A2044 53.884 128.938 95.736 1.00 36.78 O
ATOM 28 O5' C A2044 53.028 131.138 94.927 1.00 35.26 O
TER

ATOM 1 O3' G B2452 62.825 134.608 104.790 1.00 31.18 O
ATOM 2 P A B2453 61.308 134.187 104.464 1.00 32.96 P
ATOM 3 OP1 A B2453 60.690 133.744 105.737 1.00 30.50 O
ATOM 4 OP2 A B2453 61.308 133.284 103.300 1.00 34.22 O
ATOM 5 O5' A B2453 60.607 135.546 104.006 1.00 33.75 O
ATOM 6 C5' A B2453 61.251 136.424 103.060 1.00 33.14 C
ATOM 7 C4' A B2453 60.233 137.124 102.184 1.00 32.52 C
ATOM 8 O4' A B2453 59.395 136.134 101.542 1.00 33.32 O
ATOM 9 C3' A B2453 59.220 138.037 102.848 1.00 32.11 C
ATOM 10 O3' A B2453 59.754 139.313 103.127 1.00 33.46 O
ATOM 11 C2' A B2453 58.147 138.128 101.778 1.00 33.24 C
ATOM 12 O2' A B2453 58.520 138.962 100.698 1.00 34.63 O
ATOM 13 C1' A B2453 58.115 136.687 101.283 1.00 32.73 C
ATOM 14 N9 A B2453 57.114 135.893 101.988 1.00 31.33 N
ATOM 15 C8 A B2453 57.292 135.054 103.055 1.00 32.46 C
ATOM 16 N7 A B2453 56.189 134.491 103.474 1.00 33.01 N
ATOM 17 C5 A B2453 55.216 134.992 102.622 1.00 32.49 C
ATOM 18 C6 A B2453 53.830 134.775 102.536 1.00 31.98 C
ATOM 19 N6 A B2453 53.154 133.962 103.348 1.00 28.88 N
ATOM 20 N1 A B2453 53.154 135.431 101.571 1.00 33.05 N
ATOM 21 C2 A B2453 53.834 136.246 100.750 1.00 34.15 C
ATOM 22 N3 A B2453 55.132 136.526 100.728 1.00 33.05 N
ATOM 23 C4 A B2453 55.774 135.858 101.702 1.00 31.82 C
ATOM 24 P G B2454 60.017 139.727 104.644 1.00 35.02 P
ATOM 25 OP1 G B2454 58.735 139.603 105.357 1.00 35.24 O
ATOM 26 OP2 G B2454 60.735 141.017 104.666 1.00 34.94 O
ATOM 27 O5' G B2454 60.996 138.568 105.123 1.00 34.76 O
TER

Atoms:
OP1: (54.874,126.602,98.745)
OP2: (56.232,127.691,100.615)
C3': (52.689,130.578,97.969)
C1': (52.869,132.321,99.548)
C5': (52.684,128.763,99.791)
O6: (58.510,134.315,99.447)
O4': (52.547,131.131,100.250)
C8: (55.152,131.936,100.599)
C2: (55.507,135.264,97.793)
C6: (57.314,134.290,99.141)
C5: (56.306,133.430,99.619)
C4: (55.023,133.574,99.133)
P: (54.922,127.376,100.006)
C4': (52.164,130.099,99.311)
C2': (52.530,132.088,98.075)
O2': (51.214,132.542,97.851)
N1: (56.813,135.196,98.208)
N2: (55.215,136.211,96.902)
N3: (54.556,134.462,98.228)
N7: (56.371,132.397,100.545)
N9: (54.285,132.600,99.759)
O5': (54.131,128.743,99.791)
O3': (51.930,130.023,96.906)
OP1: (60.690,133.744,105.737)
OP2: (61.308,133.284,103.300)
C3': (59.220,138.037,102.848)
C1': (58.115,136.687,101.283)
C5': (61.251,136.424,103.060)
O4': (59.395,136.134,101.542)
C8: (57.292,135.054,103.055)
O2': (58.520,138.962,100.698)
C6: (53.830,134.775,102.536)
C5: (55.216,134.992,102.622)
C4: (55.774,135.858,101.702)
P: (61.308,134.187,104.464)
C4': (60.233,137.124,102.184)
C2': (58.147,138.128,101.778)
C2: (53.834,136.246,100.750)
N1: (53.154,135.431,101.571)
N3: (55.132,136.526,100.728)
N6: (53.154,133.962,103.348)
N7: (56.189,134.491,103.474)
N9: (57.114,135.893,101.988)
O5': (60.607,135.546,104.006)
O3': (59.754,139.313,103.127)
Image (generated by PyMOL):
PyMOL image
show in jmol