Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2QEK:B3:A20
Extra
PDB:
ATOM 1 O3' U A 2 17.509 -6.398 20.894 1.00 40.48 O
ATOM 2 P G A 3 16.571 -5.490 19.954 1.00 39.70 P
ATOM 3 OP1 G A 3 15.916 -4.493 20.835 1.00 41.99 O
ATOM 4 OP2 G A 3 15.737 -6.379 19.109 1.00 42.07 O
ATOM 5 O5' G A 3 17.600 -4.743 19.006 1.00 40.47 O
ATOM 6 C5' G A 3 18.745 -4.074 19.553 1.00 40.81 C
ATOM 7 C4' G A 3 19.743 -3.796 18.465 1.00 39.56 C
ATOM 8 O4' G A 3 20.305 -5.039 17.968 1.00 40.82 O
ATOM 9 C3' G A 3 19.159 -3.154 17.223 1.00 41.42 C
ATOM 10 O3' G A 3 18.989 -1.759 17.410 1.00 42.53 O
ATOM 11 C2' G A 3 20.214 -3.482 16.180 1.00 40.09 C
ATOM 12 O2' G A 3 21.333 -2.643 16.331 1.00 43.22 O
ATOM 13 C1' G A 3 20.605 -4.909 16.586 1.00 39.81 C
ATOM 14 N9 G A 3 19.893 -5.962 15.859 1.00 38.56 N
ATOM 15 C8 G A 3 18.836 -6.710 16.318 1.00 38.41 C
ATOM 16 N7 G A 3 18.411 -7.588 15.446 1.00 37.30 N
ATOM 17 C5 G A 3 19.232 -7.408 14.343 1.00 37.47 C
ATOM 18 C6 G A 3 19.239 -8.065 13.072 1.00 39.06 C
ATOM 19 O6 G A 3 18.480 -8.957 12.653 1.00 37.60 O
ATOM 20 N1 G A 3 20.251 -7.574 12.250 1.00 38.93 N
ATOM 21 C2 G A 3 21.134 -6.581 12.592 1.00 39.68 C
ATOM 22 N2 G A 3 22.055 -6.265 11.662 1.00 39.67 N
ATOM 23 N3 G A 3 21.125 -5.949 13.757 1.00 38.68 N
ATOM 24 C4 G A 3 20.157 -6.410 14.579 1.00 38.27 C
ATOM 25 P C A 4 17.833 -0.988 16.611 1.00 45.38 P
ATOM 26 OP1 C A 4 17.701 0.360 17.233 1.00 45.51 O
ATOM 27 OP2 C A 4 16.637 -1.872 16.506 1.00 44.38 O
ATOM 28 O5' C A 4 18.462 -0.818 15.165 1.00 41.76 O
TER
ATOM 1 O3' C B 19 25.758 -9.992 5.979 1.00 51.89 O
ATOM 2 P A B 20 26.476 -11.078 6.930 1.00 54.75 P
ATOM 3 OP1 A B 20 27.827 -11.340 6.367 1.00 55.27 O
ATOM 4 OP2 A B 20 25.540 -12.211 7.136 1.00 54.71 O
ATOM 5 O5' A B 20 26.656 -10.325 8.326 1.00 52.83 O
ATOM 6 C5' A B 20 27.463 -9.133 8.427 1.00 51.71 C
ATOM 7 C4' A B 20 27.350 -8.523 9.810 1.00 50.83 C
ATOM 8 O4' A B 20 25.993 -8.060 10.043 1.00 48.91 O
ATOM 9 C3' A B 20 27.633 -9.447 10.986 1.00 50.40 C
ATOM 10 O3' A B 20 29.032 -9.567 11.232 1.00 51.69 O
ATOM 11 C2' A B 20 26.915 -8.739 12.128 1.00 49.45 C
ATOM 12 O2' A B 20 27.642 -7.646 12.651 1.00 51.34 O
ATOM 13 C1' A B 20 25.667 -8.210 11.417 1.00 47.79 C
ATOM 14 N9 A B 20 24.544 -9.136 11.518 1.00 44.26 N
ATOM 15 C8 A B 20 24.141 -10.061 10.589 1.00 42.87 C
ATOM 16 N7 A B 20 23.101 -10.763 10.960 1.00 42.81 N
ATOM 17 C5 A B 20 22.795 -10.265 12.220 1.00 41.50 C
ATOM 18 C6 A B 20 21.795 -10.594 13.143 1.00 39.79 C
ATOM 19 N6 A B 20 20.868 -11.534 12.925 1.00 39.37 N
ATOM 20 N1 A B 20 21.774 -9.915 14.313 1.00 39.34 N
ATOM 21 C2 A B 20 22.695 -8.964 14.520 1.00 38.61 C
ATOM 22 N3 A B 20 23.681 -8.560 13.723 1.00 41.68 N
ATOM 23 C4 A B 20 23.677 -9.262 12.576 1.00 41.98 C
ATOM 24 P A B 21 29.599 -10.850 12.020 1.00 49.67 P
ATOM 25 OP1 A B 21 31.079 -10.727 11.990 1.00 50.53 O
ATOM 26 OP2 A B 21 28.952 -12.070 11.480 1.00 50.71 O
ATOM 27 O5' A B 21 29.115 -10.649 13.526 1.00 49.70 O
TER
ATOM 2 P G A 3 16.571 -5.490 19.954 1.00 39.70 P
ATOM 3 OP1 G A 3 15.916 -4.493 20.835 1.00 41.99 O
ATOM 4 OP2 G A 3 15.737 -6.379 19.109 1.00 42.07 O
ATOM 5 O5' G A 3 17.600 -4.743 19.006 1.00 40.47 O
ATOM 6 C5' G A 3 18.745 -4.074 19.553 1.00 40.81 C
ATOM 7 C4' G A 3 19.743 -3.796 18.465 1.00 39.56 C
ATOM 8 O4' G A 3 20.305 -5.039 17.968 1.00 40.82 O
ATOM 9 C3' G A 3 19.159 -3.154 17.223 1.00 41.42 C
ATOM 10 O3' G A 3 18.989 -1.759 17.410 1.00 42.53 O
ATOM 11 C2' G A 3 20.214 -3.482 16.180 1.00 40.09 C
ATOM 12 O2' G A 3 21.333 -2.643 16.331 1.00 43.22 O
ATOM 13 C1' G A 3 20.605 -4.909 16.586 1.00 39.81 C
ATOM 14 N9 G A 3 19.893 -5.962 15.859 1.00 38.56 N
ATOM 15 C8 G A 3 18.836 -6.710 16.318 1.00 38.41 C
ATOM 16 N7 G A 3 18.411 -7.588 15.446 1.00 37.30 N
ATOM 17 C5 G A 3 19.232 -7.408 14.343 1.00 37.47 C
ATOM 18 C6 G A 3 19.239 -8.065 13.072 1.00 39.06 C
ATOM 19 O6 G A 3 18.480 -8.957 12.653 1.00 37.60 O
ATOM 20 N1 G A 3 20.251 -7.574 12.250 1.00 38.93 N
ATOM 21 C2 G A 3 21.134 -6.581 12.592 1.00 39.68 C
ATOM 22 N2 G A 3 22.055 -6.265 11.662 1.00 39.67 N
ATOM 23 N3 G A 3 21.125 -5.949 13.757 1.00 38.68 N
ATOM 24 C4 G A 3 20.157 -6.410 14.579 1.00 38.27 C
ATOM 25 P C A 4 17.833 -0.988 16.611 1.00 45.38 P
ATOM 26 OP1 C A 4 17.701 0.360 17.233 1.00 45.51 O
ATOM 27 OP2 C A 4 16.637 -1.872 16.506 1.00 44.38 O
ATOM 28 O5' C A 4 18.462 -0.818 15.165 1.00 41.76 O
TER
ATOM 1 O3' C B 19 25.758 -9.992 5.979 1.00 51.89 O
ATOM 2 P A B 20 26.476 -11.078 6.930 1.00 54.75 P
ATOM 3 OP1 A B 20 27.827 -11.340 6.367 1.00 55.27 O
ATOM 4 OP2 A B 20 25.540 -12.211 7.136 1.00 54.71 O
ATOM 5 O5' A B 20 26.656 -10.325 8.326 1.00 52.83 O
ATOM 6 C5' A B 20 27.463 -9.133 8.427 1.00 51.71 C
ATOM 7 C4' A B 20 27.350 -8.523 9.810 1.00 50.83 C
ATOM 8 O4' A B 20 25.993 -8.060 10.043 1.00 48.91 O
ATOM 9 C3' A B 20 27.633 -9.447 10.986 1.00 50.40 C
ATOM 10 O3' A B 20 29.032 -9.567 11.232 1.00 51.69 O
ATOM 11 C2' A B 20 26.915 -8.739 12.128 1.00 49.45 C
ATOM 12 O2' A B 20 27.642 -7.646 12.651 1.00 51.34 O
ATOM 13 C1' A B 20 25.667 -8.210 11.417 1.00 47.79 C
ATOM 14 N9 A B 20 24.544 -9.136 11.518 1.00 44.26 N
ATOM 15 C8 A B 20 24.141 -10.061 10.589 1.00 42.87 C
ATOM 16 N7 A B 20 23.101 -10.763 10.960 1.00 42.81 N
ATOM 17 C5 A B 20 22.795 -10.265 12.220 1.00 41.50 C
ATOM 18 C6 A B 20 21.795 -10.594 13.143 1.00 39.79 C
ATOM 19 N6 A B 20 20.868 -11.534 12.925 1.00 39.37 N
ATOM 20 N1 A B 20 21.774 -9.915 14.313 1.00 39.34 N
ATOM 21 C2 A B 20 22.695 -8.964 14.520 1.00 38.61 C
ATOM 22 N3 A B 20 23.681 -8.560 13.723 1.00 41.68 N
ATOM 23 C4 A B 20 23.677 -9.262 12.576 1.00 41.98 C
ATOM 24 P A B 21 29.599 -10.850 12.020 1.00 49.67 P
ATOM 25 OP1 A B 21 31.079 -10.727 11.990 1.00 50.53 O
ATOM 26 OP2 A B 21 28.952 -12.070 11.480 1.00 50.71 O
ATOM 27 O5' A B 21 29.115 -10.649 13.526 1.00 49.70 O
TER
Atoms:
OP1: (15.916,-4.493,20.835)
OP2: (15.737,-6.379,19.109)
C3': (19.159,-3.154,17.223)
C1': (20.605,-4.909,16.586)
C5': (18.745,-4.074,19.553)
O6: (18.480,-8.957,12.653)
O4': (20.305,-5.039,17.968)
C8: (18.836,-6.710,16.318)
C2: (21.134,-6.581,12.592)
C6: (19.239,-8.065,13.072)
C5: (19.232,-7.408,14.343)
C4: (20.157,-6.410,14.579)
P: (16.571,-5.490,19.954)
C4': (19.743,-3.796,18.465)
C2': (20.214,-3.482,16.180)
O2': (21.333,-2.643,16.331)
N1: (20.251,-7.574,12.250)
N2: (22.055,-6.265,11.662)
N3: (21.125,-5.949,13.757)
N7: (18.411,-7.588,15.446)
N9: (19.893,-5.962,15.859)
O5': (17.600,-4.743,19.006)
O3': (18.989,-1.759,17.410)
OP2: (15.737,-6.379,19.109)
C3': (19.159,-3.154,17.223)
C1': (20.605,-4.909,16.586)
C5': (18.745,-4.074,19.553)
O6: (18.480,-8.957,12.653)
O4': (20.305,-5.039,17.968)
C8: (18.836,-6.710,16.318)
C2: (21.134,-6.581,12.592)
C6: (19.239,-8.065,13.072)
C5: (19.232,-7.408,14.343)
C4: (20.157,-6.410,14.579)
P: (16.571,-5.490,19.954)
C4': (19.743,-3.796,18.465)
C2': (20.214,-3.482,16.180)
O2': (21.333,-2.643,16.331)
N1: (20.251,-7.574,12.250)
N2: (22.055,-6.265,11.662)
N3: (21.125,-5.949,13.757)
N7: (18.411,-7.588,15.446)
N9: (19.893,-5.962,15.859)
O5': (17.600,-4.743,19.006)
O3': (18.989,-1.759,17.410)
OP1: (27.827,-11.340,6.367)
OP2: (25.540,-12.211,7.136)
C3': (27.633,-9.447,10.986)
C1': (25.667,-8.210,11.417)
C5': (27.463,-9.133,8.427)
O4': (25.993,-8.060,10.043)
C8: (24.141,-10.061,10.589)
O2': (27.642,-7.646,12.651)
C6: (21.795,-10.594,13.143)
C5: (22.795,-10.265,12.220)
C4: (23.677,-9.262,12.576)
P: (26.476,-11.078,6.930)
C4': (27.350,-8.523,9.810)
C2': (26.915,-8.739,12.128)
C2: (22.695,-8.964,14.520)
N1: (21.774,-9.915,14.313)
N3: (23.681,-8.560,13.723)
N6: (20.868,-11.534,12.925)
N7: (23.101,-10.763,10.960)
N9: (24.544,-9.136,11.518)
O5': (26.656,-10.325,8.326)
O3': (29.032,-9.567,11.232)
OP2: (25.540,-12.211,7.136)
C3': (27.633,-9.447,10.986)
C1': (25.667,-8.210,11.417)
C5': (27.463,-9.133,8.427)
O4': (25.993,-8.060,10.043)
C8: (24.141,-10.061,10.589)
O2': (27.642,-7.646,12.651)
C6: (21.795,-10.594,13.143)
C5: (22.795,-10.265,12.220)
C4: (23.677,-9.262,12.576)
P: (26.476,-11.078,6.930)
C4': (27.350,-8.523,9.810)
C2': (26.915,-8.739,12.128)
C2: (22.695,-8.964,14.520)
N1: (21.774,-9.915,14.313)
N3: (23.681,-8.560,13.723)
N6: (20.868,-11.534,12.925)
N7: (23.101,-10.763,10.960)
N9: (24.544,-9.136,11.518)
O5': (26.656,-10.325,8.326)
O3': (29.032,-9.567,11.232)
Image (generated by PyMOL):