Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1226:1208
Extra
PDB:
ATOM 1 O3' U A 225 96.723 -11.158 110.010 1.00 50.81 O
ATOM 2 P G A 226 96.847 -12.278 111.133 1.00 50.43 P
ATOM 3 OP1 G A 226 95.954 -13.389 110.738 1.00 50.08 O
ATOM 4 OP2 G A 226 96.615 -11.601 112.447 1.00 50.78 O
ATOM 5 O5' G A 226 98.360 -12.730 110.967 1.00 50.82 O
ATOM 6 C5' G A 226 98.770 -13.391 109.777 1.00 50.57 C
ATOM 7 C4' G A 226 100.172 -13.914 109.880 1.00 51.04 C
ATOM 8 O4' G A 226 101.112 -12.812 109.776 1.00 51.25 O
ATOM 9 C3' G A 226 100.532 -14.585 111.195 1.00 51.60 C
ATOM 10 O3' G A 226 100.135 -15.928 111.252 1.00 51.56 O
ATOM 11 C2' G A 226 102.033 -14.399 111.268 1.00 52.07 C
ATOM 12 O2' G A 226 102.690 -15.310 110.387 1.00 52.03 O
ATOM 13 C1' G A 226 102.169 -12.997 110.691 1.00 51.87 C
ATOM 14 N9 G A 226 102.084 -11.940 111.730 1.00 52.16 N
ATOM 15 C8 G A 226 101.038 -11.068 111.974 1.00 51.91 C
ATOM 16 N7 G A 226 101.292 -10.233 112.951 1.00 52.30 N
ATOM 17 C5 G A 226 102.587 -10.536 113.344 1.00 52.84 C
ATOM 18 C6 G A 226 103.412 -9.962 114.335 1.00 53.43 C
ATOM 19 O6 G A 226 103.128 -9.010 115.092 1.00 53.60 O
ATOM 20 N1 G A 226 104.675 -10.617 114.406 1.00 53.87 N
ATOM 21 C2 G A 226 105.059 -11.677 113.598 1.00 53.73 C
ATOM 22 N2 G A 226 106.261 -12.230 113.738 1.00 54.18 N
ATOM 23 N3 G A 226 104.261 -12.179 112.668 1.00 53.17 N
ATOM 24 C4 G A 226 103.071 -11.577 112.601 1.00 52.75 C
ATOM 25 P U A 227 99.757 -16.564 112.666 1.00 59.89 P
ATOM 26 OP1 U A 227 99.274 -17.945 112.416 1.00 59.75 O
ATOM 27 OP2 U A 227 98.871 -15.595 113.349 1.00 59.82 O
ATOM 28 O5' U A 227 101.132 -16.604 113.407 1.00 60.56 O
TER
ATOM 1 O3' U B 207 104.836 -15.871 108.037 1.00 59.94 O
ATOM 2 P A B 208 104.558 -15.213 106.540 1.00 55.14 P
ATOM 3 OP1 A B 208 103.345 -15.862 106.013 1.00 54.64 O
ATOM 4 OP2 A B 208 105.819 -15.334 105.750 1.00 55.31 O
ATOM 5 O5' A B 208 104.222 -13.663 106.832 1.00 55.06 O
ATOM 6 C5' A B 208 102.868 -13.218 106.901 1.00 54.64 C
ATOM 7 C4' A B 208 102.728 -11.724 107.146 1.00 54.63 C
ATOM 8 O4' A B 208 103.438 -11.348 108.361 1.00 55.21 O
ATOM 9 C3' A B 208 103.262 -10.805 106.044 1.00 54.43 C
ATOM 10 O3' A B 208 102.500 -9.588 106.031 1.00 54.18 O
ATOM 11 C2' A B 208 104.659 -10.492 106.556 1.00 55.02 C
ATOM 12 O2' A B 208 105.242 -9.340 106.004 1.00 55.01 O
ATOM 13 C1' A B 208 104.376 -10.325 108.047 1.00 55.39 C
ATOM 14 N9 A B 208 105.553 -10.465 108.914 1.00 56.04 N
ATOM 15 C8 A B 208 106.704 -11.199 108.756 1.00 56.37 C
ATOM 16 N7 A B 208 107.597 -11.061 109.736 1.00 56.98 N
ATOM 17 C5 A B 208 106.977 -10.167 110.598 1.00 57.05 C
ATOM 18 C6 A B 208 107.369 -9.601 111.827 1.00 57.58 C
ATOM 19 N6 A B 208 108.508 -9.853 112.432 1.00 58.17 N
ATOM 20 N1 A B 208 106.540 -8.739 112.431 1.00 57.51 N
ATOM 21 C2 A B 208 105.375 -8.486 111.802 1.00 56.91 C
ATOM 22 N3 A B 208 104.880 -8.932 110.640 1.00 56.37 N
ATOM 23 C4 A B 208 105.738 -9.788 110.083 1.00 56.47 C
ATOM 24 P G B 209 101.100 -9.508 105.257 1.00 54.01 P
ATOM 25 OP1 G B 209 100.641 -8.103 105.287 1.00 53.87 O
ATOM 26 OP2 G B 209 100.230 -10.526 105.838 1.00 53.94 O
ATOM 27 O5' G B 209 101.499 -9.917 103.767 1.00 53.70 O
TER
ATOM 2 P G A 226 96.847 -12.278 111.133 1.00 50.43 P
ATOM 3 OP1 G A 226 95.954 -13.389 110.738 1.00 50.08 O
ATOM 4 OP2 G A 226 96.615 -11.601 112.447 1.00 50.78 O
ATOM 5 O5' G A 226 98.360 -12.730 110.967 1.00 50.82 O
ATOM 6 C5' G A 226 98.770 -13.391 109.777 1.00 50.57 C
ATOM 7 C4' G A 226 100.172 -13.914 109.880 1.00 51.04 C
ATOM 8 O4' G A 226 101.112 -12.812 109.776 1.00 51.25 O
ATOM 9 C3' G A 226 100.532 -14.585 111.195 1.00 51.60 C
ATOM 10 O3' G A 226 100.135 -15.928 111.252 1.00 51.56 O
ATOM 11 C2' G A 226 102.033 -14.399 111.268 1.00 52.07 C
ATOM 12 O2' G A 226 102.690 -15.310 110.387 1.00 52.03 O
ATOM 13 C1' G A 226 102.169 -12.997 110.691 1.00 51.87 C
ATOM 14 N9 G A 226 102.084 -11.940 111.730 1.00 52.16 N
ATOM 15 C8 G A 226 101.038 -11.068 111.974 1.00 51.91 C
ATOM 16 N7 G A 226 101.292 -10.233 112.951 1.00 52.30 N
ATOM 17 C5 G A 226 102.587 -10.536 113.344 1.00 52.84 C
ATOM 18 C6 G A 226 103.412 -9.962 114.335 1.00 53.43 C
ATOM 19 O6 G A 226 103.128 -9.010 115.092 1.00 53.60 O
ATOM 20 N1 G A 226 104.675 -10.617 114.406 1.00 53.87 N
ATOM 21 C2 G A 226 105.059 -11.677 113.598 1.00 53.73 C
ATOM 22 N2 G A 226 106.261 -12.230 113.738 1.00 54.18 N
ATOM 23 N3 G A 226 104.261 -12.179 112.668 1.00 53.17 N
ATOM 24 C4 G A 226 103.071 -11.577 112.601 1.00 52.75 C
ATOM 25 P U A 227 99.757 -16.564 112.666 1.00 59.89 P
ATOM 26 OP1 U A 227 99.274 -17.945 112.416 1.00 59.75 O
ATOM 27 OP2 U A 227 98.871 -15.595 113.349 1.00 59.82 O
ATOM 28 O5' U A 227 101.132 -16.604 113.407 1.00 60.56 O
TER
ATOM 1 O3' U B 207 104.836 -15.871 108.037 1.00 59.94 O
ATOM 2 P A B 208 104.558 -15.213 106.540 1.00 55.14 P
ATOM 3 OP1 A B 208 103.345 -15.862 106.013 1.00 54.64 O
ATOM 4 OP2 A B 208 105.819 -15.334 105.750 1.00 55.31 O
ATOM 5 O5' A B 208 104.222 -13.663 106.832 1.00 55.06 O
ATOM 6 C5' A B 208 102.868 -13.218 106.901 1.00 54.64 C
ATOM 7 C4' A B 208 102.728 -11.724 107.146 1.00 54.63 C
ATOM 8 O4' A B 208 103.438 -11.348 108.361 1.00 55.21 O
ATOM 9 C3' A B 208 103.262 -10.805 106.044 1.00 54.43 C
ATOM 10 O3' A B 208 102.500 -9.588 106.031 1.00 54.18 O
ATOM 11 C2' A B 208 104.659 -10.492 106.556 1.00 55.02 C
ATOM 12 O2' A B 208 105.242 -9.340 106.004 1.00 55.01 O
ATOM 13 C1' A B 208 104.376 -10.325 108.047 1.00 55.39 C
ATOM 14 N9 A B 208 105.553 -10.465 108.914 1.00 56.04 N
ATOM 15 C8 A B 208 106.704 -11.199 108.756 1.00 56.37 C
ATOM 16 N7 A B 208 107.597 -11.061 109.736 1.00 56.98 N
ATOM 17 C5 A B 208 106.977 -10.167 110.598 1.00 57.05 C
ATOM 18 C6 A B 208 107.369 -9.601 111.827 1.00 57.58 C
ATOM 19 N6 A B 208 108.508 -9.853 112.432 1.00 58.17 N
ATOM 20 N1 A B 208 106.540 -8.739 112.431 1.00 57.51 N
ATOM 21 C2 A B 208 105.375 -8.486 111.802 1.00 56.91 C
ATOM 22 N3 A B 208 104.880 -8.932 110.640 1.00 56.37 N
ATOM 23 C4 A B 208 105.738 -9.788 110.083 1.00 56.47 C
ATOM 24 P G B 209 101.100 -9.508 105.257 1.00 54.01 P
ATOM 25 OP1 G B 209 100.641 -8.103 105.287 1.00 53.87 O
ATOM 26 OP2 G B 209 100.230 -10.526 105.838 1.00 53.94 O
ATOM 27 O5' G B 209 101.499 -9.917 103.767 1.00 53.70 O
TER
Atoms:
OP1: (95.954,-13.389,110.738)
OP2: (96.615,-11.601,112.447)
C3': (100.532,-14.585,111.195)
C1': (102.169,-12.997,110.691)
C5': (98.770,-13.391,109.777)
O6: (103.128,-9.010,115.092)
O4': (101.112,-12.812,109.776)
C8: (101.038,-11.068,111.974)
C2: (105.059,-11.677,113.598)
C6: (103.412,-9.962,114.335)
C5: (102.587,-10.536,113.344)
C4: (103.071,-11.577,112.601)
P: (96.847,-12.278,111.133)
C4': (100.172,-13.914,109.880)
C2': (102.033,-14.399,111.268)
O2': (102.690,-15.310,110.387)
N1: (104.675,-10.617,114.406)
N2: (106.261,-12.230,113.738)
N3: (104.261,-12.179,112.668)
N7: (101.292,-10.233,112.951)
N9: (102.084,-11.940,111.730)
O5': (98.360,-12.730,110.967)
O3': (100.135,-15.928,111.252)
OP2: (96.615,-11.601,112.447)
C3': (100.532,-14.585,111.195)
C1': (102.169,-12.997,110.691)
C5': (98.770,-13.391,109.777)
O6: (103.128,-9.010,115.092)
O4': (101.112,-12.812,109.776)
C8: (101.038,-11.068,111.974)
C2: (105.059,-11.677,113.598)
C6: (103.412,-9.962,114.335)
C5: (102.587,-10.536,113.344)
C4: (103.071,-11.577,112.601)
P: (96.847,-12.278,111.133)
C4': (100.172,-13.914,109.880)
C2': (102.033,-14.399,111.268)
O2': (102.690,-15.310,110.387)
N1: (104.675,-10.617,114.406)
N2: (106.261,-12.230,113.738)
N3: (104.261,-12.179,112.668)
N7: (101.292,-10.233,112.951)
N9: (102.084,-11.940,111.730)
O5': (98.360,-12.730,110.967)
O3': (100.135,-15.928,111.252)
OP1: (103.345,-15.862,106.013)
OP2: (105.819,-15.334,105.750)
C3': (103.262,-10.805,106.044)
C1': (104.376,-10.325,108.047)
C5': (102.868,-13.218,106.901)
O4': (103.438,-11.348,108.361)
C8: (106.704,-11.199,108.756)
O2': (105.242,-9.340,106.004)
C6: (107.369,-9.601,111.827)
C5: (106.977,-10.167,110.598)
C4: (105.738,-9.788,110.083)
P: (104.558,-15.213,106.540)
C4': (102.728,-11.724,107.146)
C2': (104.659,-10.492,106.556)
C2: (105.375,-8.486,111.802)
N1: (106.540,-8.739,112.431)
N3: (104.880,-8.932,110.640)
N6: (108.508,-9.853,112.432)
N7: (107.597,-11.061,109.736)
N9: (105.553,-10.465,108.914)
O5': (104.222,-13.663,106.832)
O3': (102.500,-9.588,106.031)
OP2: (105.819,-15.334,105.750)
C3': (103.262,-10.805,106.044)
C1': (104.376,-10.325,108.047)
C5': (102.868,-13.218,106.901)
O4': (103.438,-11.348,108.361)
C8: (106.704,-11.199,108.756)
O2': (105.242,-9.340,106.004)
C6: (107.369,-9.601,111.827)
C5: (106.977,-10.167,110.598)
C4: (105.738,-9.788,110.083)
P: (104.558,-15.213,106.540)
C4': (102.728,-11.724,107.146)
C2': (104.659,-10.492,106.556)
C2: (105.375,-8.486,111.802)
N1: (106.540,-8.739,112.431)
N3: (104.880,-8.932,110.640)
N6: (108.508,-9.853,112.432)
N7: (107.597,-11.061,109.736)
N9: (105.553,-10.465,108.914)
O5': (104.222,-13.663,106.832)
O3': (102.500,-9.588,106.031)
Image (generated by PyMOL):