Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2376:A2339
Extra
PDB:
ATOM 1 O3' G A2375 -131.678 -51.504 46.347 1.00 0.01 O
ATOM 2 P G A2376 -130.937 -51.503 44.919 1.00 0.01 P
ATOM 3 OP1 G A2376 -130.692 -52.911 44.553 1.00 0.01 O
ATOM 4 OP2 G A2376 -129.804 -50.575 45.012 1.00 0.01 O
ATOM 5 O5' G A2376 -132.031 -50.907 43.961 1.00 0.01 O
ATOM 6 C5' G A2376 -131.728 -49.816 43.121 1.00 0.01 C
ATOM 7 C4' G A2376 -132.918 -48.922 42.911 1.00 0.01 C
ATOM 8 O4' G A2376 -132.718 -47.700 43.654 1.00 0.01 O
ATOM 9 C3' G A2376 -133.148 -48.491 41.469 1.00 0.01 C
ATOM 10 O3' G A2376 -134.037 -49.337 40.786 1.00 0.01 O
ATOM 11 C2' G A2376 -133.650 -47.071 41.569 1.00 0.01 C
ATOM 12 O2' G A2376 -135.062 -47.052 41.723 1.00 0.01 O
ATOM 13 C1' G A2376 -132.997 -46.588 42.853 1.00 0.01 C
ATOM 14 N9 G A2376 -131.737 -45.882 42.618 1.00 0.01 N
ATOM 15 C8 G A2376 -130.479 -46.292 43.014 1.00 0.01 C
ATOM 16 N7 G A2376 -129.520 -45.429 42.740 1.00 0.01 N
ATOM 17 C5 G A2376 -130.231 -44.372 42.132 1.00 0.01 C
ATOM 18 C6 G A2376 -129.793 -43.127 41.604 1.00 0.01 C
ATOM 19 O6 G A2376 -128.653 -42.684 41.540 1.00 0.01 O
ATOM 20 N1 G A2376 -130.834 -42.390 41.095 1.00 0.01 N
ATOM 21 C2 G A2376 -132.136 -42.793 41.099 1.00 0.01 C
ATOM 22 N2 G A2376 -133.034 -41.957 40.574 1.00 0.01 N
ATOM 23 N3 G A2376 -132.563 -43.932 41.576 1.00 0.01 N
ATOM 24 C4 G A2376 -131.578 -44.660 42.068 1.00 0.01 C
ATOM 25 P U A2377 -133.662 -49.850 39.326 1.00 0.01 P
ATOM 26 OP1 U A2377 -134.177 -51.238 39.221 1.00 0.01 O
ATOM 27 OP2 U A2377 -132.208 -49.613 39.142 1.00 0.01 O
ATOM 28 O5' U A2377 -134.477 -48.877 38.352 1.00 0.01 O
TER
ATOM 1 O3' G B2338 -137.092 -47.024 47.379 1.00 0.01 O
ATOM 2 P A B2339 -136.400 -45.871 46.489 1.00 0.01 P
ATOM 3 OP1 A B2339 -137.048 -44.603 46.839 1.00 0.01 O
ATOM 4 OP2 A B2339 -136.435 -46.327 45.079 1.00 0.01 O
ATOM 5 O5' A B2339 -134.898 -45.856 47.020 1.00 0.01 O
ATOM 6 C5' A B2339 -134.013 -46.934 46.736 1.00 0.01 C
ATOM 7 C4' A B2339 -132.601 -46.465 46.610 1.00 0.01 C
ATOM 8 O4' A B2339 -132.524 -45.520 45.515 1.00 0.01 O
ATOM 9 C3' A B2339 -132.060 -45.739 47.828 1.00 0.01 C
ATOM 10 O3' A B2339 -130.682 -46.062 48.007 1.00 0.01 O
ATOM 11 C2' A B2339 -132.187 -44.275 47.424 1.00 0.01 C
ATOM 12 O2' A B2339 -131.290 -43.402 48.061 1.00 0.01 O
ATOM 13 C1' A B2339 -131.889 -44.353 45.960 1.00 0.01 C
ATOM 14 N9 A B2339 -132.371 -43.214 45.185 1.00 0.01 N
ATOM 15 C8 A B2339 -133.598 -42.978 44.669 1.00 0.01 C
ATOM 16 N7 A B2339 -133.672 -41.858 43.997 1.00 0.01 N
ATOM 17 C5 A B2339 -132.404 -41.314 44.058 1.00 0.01 C
ATOM 18 C6 A B2339 -131.824 -40.137 43.551 1.00 0.01 C
ATOM 19 N6 A B2339 -132.421 -39.202 42.827 1.00 0.01 N
ATOM 20 N1 A B2339 -130.546 -39.918 43.806 1.00 0.01 N
ATOM 21 C2 A B2339 -129.901 -40.813 44.531 1.00 0.01 C
ATOM 22 N3 A B2339 -130.326 -41.942 45.064 1.00 0.01 N
ATOM 23 C4 A B2339 -131.606 -42.147 44.789 1.00 0.01 C
ATOM 24 P C B2340 -130.196 -47.425 48.750 1.00 0.01 P
ATOM 25 OP1 C B2340 -129.058 -47.039 49.633 1.00 0.01 O
ATOM 26 OP2 C B2340 -129.968 -48.437 47.701 1.00 0.01 O
ATOM 27 O5' C B2340 -131.438 -47.871 49.655 1.00 0.01 O
TER
ATOM 2 P G A2376 -130.937 -51.503 44.919 1.00 0.01 P
ATOM 3 OP1 G A2376 -130.692 -52.911 44.553 1.00 0.01 O
ATOM 4 OP2 G A2376 -129.804 -50.575 45.012 1.00 0.01 O
ATOM 5 O5' G A2376 -132.031 -50.907 43.961 1.00 0.01 O
ATOM 6 C5' G A2376 -131.728 -49.816 43.121 1.00 0.01 C
ATOM 7 C4' G A2376 -132.918 -48.922 42.911 1.00 0.01 C
ATOM 8 O4' G A2376 -132.718 -47.700 43.654 1.00 0.01 O
ATOM 9 C3' G A2376 -133.148 -48.491 41.469 1.00 0.01 C
ATOM 10 O3' G A2376 -134.037 -49.337 40.786 1.00 0.01 O
ATOM 11 C2' G A2376 -133.650 -47.071 41.569 1.00 0.01 C
ATOM 12 O2' G A2376 -135.062 -47.052 41.723 1.00 0.01 O
ATOM 13 C1' G A2376 -132.997 -46.588 42.853 1.00 0.01 C
ATOM 14 N9 G A2376 -131.737 -45.882 42.618 1.00 0.01 N
ATOM 15 C8 G A2376 -130.479 -46.292 43.014 1.00 0.01 C
ATOM 16 N7 G A2376 -129.520 -45.429 42.740 1.00 0.01 N
ATOM 17 C5 G A2376 -130.231 -44.372 42.132 1.00 0.01 C
ATOM 18 C6 G A2376 -129.793 -43.127 41.604 1.00 0.01 C
ATOM 19 O6 G A2376 -128.653 -42.684 41.540 1.00 0.01 O
ATOM 20 N1 G A2376 -130.834 -42.390 41.095 1.00 0.01 N
ATOM 21 C2 G A2376 -132.136 -42.793 41.099 1.00 0.01 C
ATOM 22 N2 G A2376 -133.034 -41.957 40.574 1.00 0.01 N
ATOM 23 N3 G A2376 -132.563 -43.932 41.576 1.00 0.01 N
ATOM 24 C4 G A2376 -131.578 -44.660 42.068 1.00 0.01 C
ATOM 25 P U A2377 -133.662 -49.850 39.326 1.00 0.01 P
ATOM 26 OP1 U A2377 -134.177 -51.238 39.221 1.00 0.01 O
ATOM 27 OP2 U A2377 -132.208 -49.613 39.142 1.00 0.01 O
ATOM 28 O5' U A2377 -134.477 -48.877 38.352 1.00 0.01 O
TER
ATOM 1 O3' G B2338 -137.092 -47.024 47.379 1.00 0.01 O
ATOM 2 P A B2339 -136.400 -45.871 46.489 1.00 0.01 P
ATOM 3 OP1 A B2339 -137.048 -44.603 46.839 1.00 0.01 O
ATOM 4 OP2 A B2339 -136.435 -46.327 45.079 1.00 0.01 O
ATOM 5 O5' A B2339 -134.898 -45.856 47.020 1.00 0.01 O
ATOM 6 C5' A B2339 -134.013 -46.934 46.736 1.00 0.01 C
ATOM 7 C4' A B2339 -132.601 -46.465 46.610 1.00 0.01 C
ATOM 8 O4' A B2339 -132.524 -45.520 45.515 1.00 0.01 O
ATOM 9 C3' A B2339 -132.060 -45.739 47.828 1.00 0.01 C
ATOM 10 O3' A B2339 -130.682 -46.062 48.007 1.00 0.01 O
ATOM 11 C2' A B2339 -132.187 -44.275 47.424 1.00 0.01 C
ATOM 12 O2' A B2339 -131.290 -43.402 48.061 1.00 0.01 O
ATOM 13 C1' A B2339 -131.889 -44.353 45.960 1.00 0.01 C
ATOM 14 N9 A B2339 -132.371 -43.214 45.185 1.00 0.01 N
ATOM 15 C8 A B2339 -133.598 -42.978 44.669 1.00 0.01 C
ATOM 16 N7 A B2339 -133.672 -41.858 43.997 1.00 0.01 N
ATOM 17 C5 A B2339 -132.404 -41.314 44.058 1.00 0.01 C
ATOM 18 C6 A B2339 -131.824 -40.137 43.551 1.00 0.01 C
ATOM 19 N6 A B2339 -132.421 -39.202 42.827 1.00 0.01 N
ATOM 20 N1 A B2339 -130.546 -39.918 43.806 1.00 0.01 N
ATOM 21 C2 A B2339 -129.901 -40.813 44.531 1.00 0.01 C
ATOM 22 N3 A B2339 -130.326 -41.942 45.064 1.00 0.01 N
ATOM 23 C4 A B2339 -131.606 -42.147 44.789 1.00 0.01 C
ATOM 24 P C B2340 -130.196 -47.425 48.750 1.00 0.01 P
ATOM 25 OP1 C B2340 -129.058 -47.039 49.633 1.00 0.01 O
ATOM 26 OP2 C B2340 -129.968 -48.437 47.701 1.00 0.01 O
ATOM 27 O5' C B2340 -131.438 -47.871 49.655 1.00 0.01 O
TER
Atoms:
OP1: (-130.692,-52.911,44.553)
OP2: (-129.804,-50.575,45.012)
C3': (-133.148,-48.491,41.469)
C1': (-132.997,-46.588,42.853)
C5': (-131.728,-49.816,43.121)
O6: (-128.653,-42.684,41.540)
O4': (-132.718,-47.700,43.654)
C8: (-130.479,-46.292,43.014)
C2: (-132.136,-42.793,41.099)
C6: (-129.793,-43.127,41.604)
C5: (-130.231,-44.372,42.132)
C4: (-131.578,-44.660,42.068)
P: (-130.937,-51.503,44.919)
C4': (-132.918,-48.922,42.911)
C2': (-133.650,-47.071,41.569)
O2': (-135.062,-47.052,41.723)
N1: (-130.834,-42.390,41.095)
N2: (-133.034,-41.957,40.574)
N3: (-132.563,-43.932,41.576)
N7: (-129.520,-45.429,42.740)
N9: (-131.737,-45.882,42.618)
O5': (-132.031,-50.907,43.961)
O3': (-134.037,-49.337,40.786)
OP2: (-129.804,-50.575,45.012)
C3': (-133.148,-48.491,41.469)
C1': (-132.997,-46.588,42.853)
C5': (-131.728,-49.816,43.121)
O6: (-128.653,-42.684,41.540)
O4': (-132.718,-47.700,43.654)
C8: (-130.479,-46.292,43.014)
C2: (-132.136,-42.793,41.099)
C6: (-129.793,-43.127,41.604)
C5: (-130.231,-44.372,42.132)
C4: (-131.578,-44.660,42.068)
P: (-130.937,-51.503,44.919)
C4': (-132.918,-48.922,42.911)
C2': (-133.650,-47.071,41.569)
O2': (-135.062,-47.052,41.723)
N1: (-130.834,-42.390,41.095)
N2: (-133.034,-41.957,40.574)
N3: (-132.563,-43.932,41.576)
N7: (-129.520,-45.429,42.740)
N9: (-131.737,-45.882,42.618)
O5': (-132.031,-50.907,43.961)
O3': (-134.037,-49.337,40.786)
OP1: (-137.048,-44.603,46.839)
OP2: (-136.435,-46.327,45.079)
C3': (-132.060,-45.739,47.828)
C1': (-131.889,-44.353,45.960)
C5': (-134.013,-46.934,46.736)
O4': (-132.524,-45.520,45.515)
C8: (-133.598,-42.978,44.669)
O2': (-131.290,-43.402,48.061)
C6: (-131.824,-40.137,43.551)
C5: (-132.404,-41.314,44.058)
C4: (-131.606,-42.147,44.789)
P: (-136.400,-45.871,46.489)
C4': (-132.601,-46.465,46.610)
C2': (-132.187,-44.275,47.424)
C2: (-129.901,-40.813,44.531)
N1: (-130.546,-39.918,43.806)
N3: (-130.326,-41.942,45.064)
N6: (-132.421,-39.202,42.827)
N7: (-133.672,-41.858,43.997)
N9: (-132.371,-43.214,45.185)
O5': (-134.898,-45.856,47.020)
O3': (-130.682,-46.062,48.007)
OP2: (-136.435,-46.327,45.079)
C3': (-132.060,-45.739,47.828)
C1': (-131.889,-44.353,45.960)
C5': (-134.013,-46.934,46.736)
O4': (-132.524,-45.520,45.515)
C8: (-133.598,-42.978,44.669)
O2': (-131.290,-43.402,48.061)
C6: (-131.824,-40.137,43.551)
C5: (-132.404,-41.314,44.058)
C4: (-131.606,-42.147,44.789)
P: (-136.400,-45.871,46.489)
C4': (-132.601,-46.465,46.610)
C2': (-132.187,-44.275,47.424)
C2: (-129.901,-40.813,44.531)
N1: (-130.546,-39.918,43.806)
N3: (-130.326,-41.942,45.064)
N6: (-132.421,-39.202,42.827)
N7: (-133.672,-41.858,43.997)
N9: (-132.371,-43.214,45.185)
O5': (-134.898,-45.856,47.020)
O3': (-130.682,-46.062,48.007)
Image (generated by PyMOL):