Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A29:A475
Extra
PDB:
ATOM 1 O3' C A 28 -49.743 -87.568 51.851 1.00 91.71 O
ATOM 2 P G A 29 -50.377 -86.145 52.122 1.00 77.46 P
ATOM 3 OP1 G A 29 -49.257 -85.175 52.235 1.00 82.57 O
ATOM 4 OP2 G A 29 -51.332 -86.326 53.240 1.00 78.38 O
ATOM 5 O5' G A 29 -51.216 -85.816 50.788 1.00 68.80 O
ATOM 6 C5' G A 29 -50.671 -84.980 49.761 1.00 71.65 C
ATOM 7 C4' G A 29 -51.759 -84.413 48.880 1.00 57.53 C
ATOM 8 O4' G A 29 -52.427 -85.459 48.140 1.00 51.28 O
ATOM 9 C3' G A 29 -52.868 -83.750 49.662 1.00 47.66 C
ATOM 10 O3' G A 29 -52.425 -82.474 50.009 1.00 45.17 O
ATOM 11 C2' G A 29 -53.896 -83.696 48.555 1.00 56.78 C
ATOM 12 O2' G A 29 -53.491 -82.815 47.529 1.00 64.82 O
ATOM 13 C1' G A 29 -53.797 -85.131 48.070 1.00 48.36 C
ATOM 14 N9 G A 29 -54.575 -86.082 48.862 1.00 52.91 N
ATOM 15 C8 G A 29 -54.159 -86.881 49.898 1.00 57.51 C
ATOM 16 N7 G A 29 -55.109 -87.634 50.390 1.00 56.04 N
ATOM 17 C5 G A 29 -56.230 -87.317 49.631 1.00 56.40 C
ATOM 18 C6 G A 29 -57.558 -87.803 49.688 1.00 56.07 C
ATOM 19 O6 G A 29 -58.042 -88.652 50.446 1.00 59.58 O
ATOM 20 N1 G A 29 -58.365 -87.198 48.735 1.00 59.00 N
ATOM 21 C2 G A 29 -57.947 -86.250 47.831 1.00 64.86 C
ATOM 22 N2 G A 29 -58.850 -85.761 46.964 1.00 71.33 N
ATOM 23 N3 G A 29 -56.711 -85.795 47.767 1.00 65.12 N
ATOM 24 C4 G A 29 -55.911 -86.366 48.693 1.00 58.90 C
ATOM 25 P G A 30 -53.171 -81.584 51.116 1.00 53.05 P
ATOM 26 OP1 G A 30 -52.546 -80.245 50.958 1.00 44.84 O
ATOM 27 OP2 G A 30 -53.200 -82.265 52.434 1.00 44.87 O
ATOM 28 O5' G A 30 -54.693 -81.510 50.619 1.00 61.97 O
TER
ATOM 1 O3' C B 474 -53.451 -80.677 41.594 1.00 45.63 O
ATOM 2 P A B 475 -53.873 -82.026 42.371 1.00 28.33 P
ATOM 3 OP1 A B 475 -54.579 -82.876 41.388 1.00 37.89 O
ATOM 4 OP2 A B 475 -54.471 -81.673 43.672 1.00 32.21 O
ATOM 5 O5' A B 475 -52.496 -82.738 42.722 1.00 43.48 O
ATOM 6 C5' A B 475 -51.837 -82.317 43.890 1.00 42.22 C
ATOM 7 C4' A B 475 -51.306 -83.524 44.616 1.00 39.93 C
ATOM 8 O4' A B 475 -52.432 -84.290 45.102 1.00 44.70 O
ATOM 9 C3' A B 475 -50.505 -84.464 43.729 1.00 43.15 C
ATOM 10 O3' A B 475 -49.511 -85.114 44.514 1.00 56.04 O
ATOM 11 C2' A B 475 -51.552 -85.478 43.295 1.00 45.01 C
ATOM 12 O2' A B 475 -50.991 -86.744 43.000 1.00 47.43 O
ATOM 13 C1' A B 475 -52.349 -85.598 44.580 1.00 43.38 C
ATOM 14 N9 A B 475 -53.691 -86.108 44.363 1.00 41.32 N
ATOM 15 C8 A B 475 -54.567 -85.752 43.381 1.00 44.43 C
ATOM 16 N7 A B 475 -55.705 -86.394 43.458 1.00 45.45 N
ATOM 17 C5 A B 475 -55.564 -87.219 44.566 1.00 48.30 C
ATOM 18 C6 A B 475 -56.414 -88.157 45.194 1.00 50.84 C
ATOM 19 N6 A B 475 -57.650 -88.446 44.780 1.00 49.68 N
ATOM 20 N1 A B 475 -55.946 -88.802 46.278 1.00 54.82 N
ATOM 21 C2 A B 475 -54.712 -88.530 46.704 1.00 54.34 C
ATOM 22 N3 A B 475 -53.827 -87.673 46.203 1.00 50.88 N
ATOM 23 C4 A B 475 -54.321 -87.050 45.130 1.00 43.36 C
ATOM 24 P C B 476 -48.133 -84.395 44.886 1.00 37.50 P
ATOM 25 OP1 C B 476 -47.399 -85.322 45.768 1.00 39.27 O
ATOM 26 OP2 C B 476 -48.420 -83.022 45.383 1.00 50.02 O
ATOM 27 O5' C B 476 -47.448 -84.272 43.441 1.00 34.89 O
TER
ATOM 2 P G A 29 -50.377 -86.145 52.122 1.00 77.46 P
ATOM 3 OP1 G A 29 -49.257 -85.175 52.235 1.00 82.57 O
ATOM 4 OP2 G A 29 -51.332 -86.326 53.240 1.00 78.38 O
ATOM 5 O5' G A 29 -51.216 -85.816 50.788 1.00 68.80 O
ATOM 6 C5' G A 29 -50.671 -84.980 49.761 1.00 71.65 C
ATOM 7 C4' G A 29 -51.759 -84.413 48.880 1.00 57.53 C
ATOM 8 O4' G A 29 -52.427 -85.459 48.140 1.00 51.28 O
ATOM 9 C3' G A 29 -52.868 -83.750 49.662 1.00 47.66 C
ATOM 10 O3' G A 29 -52.425 -82.474 50.009 1.00 45.17 O
ATOM 11 C2' G A 29 -53.896 -83.696 48.555 1.00 56.78 C
ATOM 12 O2' G A 29 -53.491 -82.815 47.529 1.00 64.82 O
ATOM 13 C1' G A 29 -53.797 -85.131 48.070 1.00 48.36 C
ATOM 14 N9 G A 29 -54.575 -86.082 48.862 1.00 52.91 N
ATOM 15 C8 G A 29 -54.159 -86.881 49.898 1.00 57.51 C
ATOM 16 N7 G A 29 -55.109 -87.634 50.390 1.00 56.04 N
ATOM 17 C5 G A 29 -56.230 -87.317 49.631 1.00 56.40 C
ATOM 18 C6 G A 29 -57.558 -87.803 49.688 1.00 56.07 C
ATOM 19 O6 G A 29 -58.042 -88.652 50.446 1.00 59.58 O
ATOM 20 N1 G A 29 -58.365 -87.198 48.735 1.00 59.00 N
ATOM 21 C2 G A 29 -57.947 -86.250 47.831 1.00 64.86 C
ATOM 22 N2 G A 29 -58.850 -85.761 46.964 1.00 71.33 N
ATOM 23 N3 G A 29 -56.711 -85.795 47.767 1.00 65.12 N
ATOM 24 C4 G A 29 -55.911 -86.366 48.693 1.00 58.90 C
ATOM 25 P G A 30 -53.171 -81.584 51.116 1.00 53.05 P
ATOM 26 OP1 G A 30 -52.546 -80.245 50.958 1.00 44.84 O
ATOM 27 OP2 G A 30 -53.200 -82.265 52.434 1.00 44.87 O
ATOM 28 O5' G A 30 -54.693 -81.510 50.619 1.00 61.97 O
TER
ATOM 1 O3' C B 474 -53.451 -80.677 41.594 1.00 45.63 O
ATOM 2 P A B 475 -53.873 -82.026 42.371 1.00 28.33 P
ATOM 3 OP1 A B 475 -54.579 -82.876 41.388 1.00 37.89 O
ATOM 4 OP2 A B 475 -54.471 -81.673 43.672 1.00 32.21 O
ATOM 5 O5' A B 475 -52.496 -82.738 42.722 1.00 43.48 O
ATOM 6 C5' A B 475 -51.837 -82.317 43.890 1.00 42.22 C
ATOM 7 C4' A B 475 -51.306 -83.524 44.616 1.00 39.93 C
ATOM 8 O4' A B 475 -52.432 -84.290 45.102 1.00 44.70 O
ATOM 9 C3' A B 475 -50.505 -84.464 43.729 1.00 43.15 C
ATOM 10 O3' A B 475 -49.511 -85.114 44.514 1.00 56.04 O
ATOM 11 C2' A B 475 -51.552 -85.478 43.295 1.00 45.01 C
ATOM 12 O2' A B 475 -50.991 -86.744 43.000 1.00 47.43 O
ATOM 13 C1' A B 475 -52.349 -85.598 44.580 1.00 43.38 C
ATOM 14 N9 A B 475 -53.691 -86.108 44.363 1.00 41.32 N
ATOM 15 C8 A B 475 -54.567 -85.752 43.381 1.00 44.43 C
ATOM 16 N7 A B 475 -55.705 -86.394 43.458 1.00 45.45 N
ATOM 17 C5 A B 475 -55.564 -87.219 44.566 1.00 48.30 C
ATOM 18 C6 A B 475 -56.414 -88.157 45.194 1.00 50.84 C
ATOM 19 N6 A B 475 -57.650 -88.446 44.780 1.00 49.68 N
ATOM 20 N1 A B 475 -55.946 -88.802 46.278 1.00 54.82 N
ATOM 21 C2 A B 475 -54.712 -88.530 46.704 1.00 54.34 C
ATOM 22 N3 A B 475 -53.827 -87.673 46.203 1.00 50.88 N
ATOM 23 C4 A B 475 -54.321 -87.050 45.130 1.00 43.36 C
ATOM 24 P C B 476 -48.133 -84.395 44.886 1.00 37.50 P
ATOM 25 OP1 C B 476 -47.399 -85.322 45.768 1.00 39.27 O
ATOM 26 OP2 C B 476 -48.420 -83.022 45.383 1.00 50.02 O
ATOM 27 O5' C B 476 -47.448 -84.272 43.441 1.00 34.89 O
TER
Atoms:
OP1: (-49.257,-85.175,52.235)
OP2: (-51.332,-86.326,53.240)
C3': (-52.868,-83.750,49.662)
C1': (-53.797,-85.131,48.070)
C5': (-50.671,-84.980,49.761)
O6: (-58.042,-88.652,50.446)
O4': (-52.427,-85.459,48.140)
C8: (-54.159,-86.881,49.898)
C2: (-57.947,-86.250,47.831)
C6: (-57.558,-87.803,49.688)
C5: (-56.230,-87.317,49.631)
C4: (-55.911,-86.366,48.693)
P: (-50.377,-86.145,52.122)
C4': (-51.759,-84.413,48.880)
C2': (-53.896,-83.696,48.555)
O2': (-53.491,-82.815,47.529)
N1: (-58.365,-87.198,48.735)
N2: (-58.850,-85.761,46.964)
N3: (-56.711,-85.795,47.767)
N7: (-55.109,-87.634,50.390)
N9: (-54.575,-86.082,48.862)
O5': (-51.216,-85.816,50.788)
O3': (-52.425,-82.474,50.009)
OP2: (-51.332,-86.326,53.240)
C3': (-52.868,-83.750,49.662)
C1': (-53.797,-85.131,48.070)
C5': (-50.671,-84.980,49.761)
O6: (-58.042,-88.652,50.446)
O4': (-52.427,-85.459,48.140)
C8: (-54.159,-86.881,49.898)
C2: (-57.947,-86.250,47.831)
C6: (-57.558,-87.803,49.688)
C5: (-56.230,-87.317,49.631)
C4: (-55.911,-86.366,48.693)
P: (-50.377,-86.145,52.122)
C4': (-51.759,-84.413,48.880)
C2': (-53.896,-83.696,48.555)
O2': (-53.491,-82.815,47.529)
N1: (-58.365,-87.198,48.735)
N2: (-58.850,-85.761,46.964)
N3: (-56.711,-85.795,47.767)
N7: (-55.109,-87.634,50.390)
N9: (-54.575,-86.082,48.862)
O5': (-51.216,-85.816,50.788)
O3': (-52.425,-82.474,50.009)
OP1: (-54.579,-82.876,41.388)
OP2: (-54.471,-81.673,43.672)
C3': (-50.505,-84.464,43.729)
C1': (-52.349,-85.598,44.580)
C5': (-51.837,-82.317,43.890)
O4': (-52.432,-84.290,45.102)
C8: (-54.567,-85.752,43.381)
O2': (-50.991,-86.744,43.000)
C6: (-56.414,-88.157,45.194)
C5: (-55.564,-87.219,44.566)
C4: (-54.321,-87.050,45.130)
P: (-53.873,-82.026,42.371)
C4': (-51.306,-83.524,44.616)
C2': (-51.552,-85.478,43.295)
C2: (-54.712,-88.530,46.704)
N1: (-55.946,-88.802,46.278)
N3: (-53.827,-87.673,46.203)
N6: (-57.650,-88.446,44.780)
N7: (-55.705,-86.394,43.458)
N9: (-53.691,-86.108,44.363)
O5': (-52.496,-82.738,42.722)
O3': (-49.511,-85.114,44.514)
OP2: (-54.471,-81.673,43.672)
C3': (-50.505,-84.464,43.729)
C1': (-52.349,-85.598,44.580)
C5': (-51.837,-82.317,43.890)
O4': (-52.432,-84.290,45.102)
C8: (-54.567,-85.752,43.381)
O2': (-50.991,-86.744,43.000)
C6: (-56.414,-88.157,45.194)
C5: (-55.564,-87.219,44.566)
C4: (-54.321,-87.050,45.130)
P: (-53.873,-82.026,42.371)
C4': (-51.306,-83.524,44.616)
C2': (-51.552,-85.478,43.295)
C2: (-54.712,-88.530,46.704)
N1: (-55.946,-88.802,46.278)
N3: (-53.827,-87.673,46.203)
N6: (-57.650,-88.446,44.780)
N7: (-55.705,-86.394,43.458)
N9: (-53.691,-86.108,44.363)
O5': (-52.496,-82.738,42.722)
O3': (-49.511,-85.114,44.514)
Image (generated by PyMOL):