Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:9113:912
Extra
PDB:
ATOM 1 O3' C A 112 54.720 30.254 113.039 1.00 52.52 O
ATOM 2 P G A 113 54.240 29.480 111.724 1.00 55.95 P
ATOM 3 OP1 G A 113 53.250 28.444 112.122 1.00 56.10 O
ATOM 4 OP2 G A 113 55.450 29.089 110.949 1.00 55.72 O
ATOM 5 O5' G A 113 53.453 30.598 110.913 1.00 55.83 O
ATOM 6 C5' G A 113 52.539 30.245 109.872 1.00 54.67 C
ATOM 7 C4' G A 113 51.671 31.427 109.528 1.00 54.80 C
ATOM 8 O4' G A 113 52.500 32.543 109.103 1.00 53.70 O
ATOM 9 C3' G A 113 50.727 31.184 108.366 1.00 54.43 C
ATOM 10 O3' G A 113 49.551 30.534 108.830 1.00 55.91 O
ATOM 11 C2' G A 113 50.481 32.596 107.852 1.00 52.91 C
ATOM 12 O2' G A 113 49.553 33.306 108.651 1.00 51.47 O
ATOM 13 C1' G A 113 51.870 33.220 108.026 1.00 51.91 C
ATOM 14 N9 G A 113 52.731 33.107 106.847 1.00 50.19 N
ATOM 15 C8 G A 113 53.833 32.296 106.692 1.00 48.72 C
ATOM 16 N7 G A 113 54.403 32.421 105.524 1.00 47.14 N
ATOM 17 C5 G A 113 53.631 33.367 104.864 1.00 47.64 C
ATOM 18 C6 G A 113 53.755 33.906 103.558 1.00 46.86 C
ATOM 19 O6 G A 113 54.600 33.644 102.692 1.00 46.26 O
ATOM 20 N1 G A 113 52.754 34.837 103.293 1.00 45.88 N
ATOM 21 C2 G A 113 51.763 35.203 104.166 1.00 45.30 C
ATOM 22 N2 G A 113 50.890 36.105 103.726 1.00 43.77 N
ATOM 23 N3 G A 113 51.637 34.714 105.385 1.00 48.07 N
ATOM 24 C4 G A 113 52.597 33.804 105.667 1.00 49.31 C
ATOM 25 P C A 114 48.833 29.424 107.916 1.00 58.98 P
ATOM 26 OP1 C A 114 47.908 28.681 108.814 1.00 59.41 O
ATOM 27 OP2 C A 114 49.852 28.676 107.126 1.00 56.71 O
ATOM 28 O5' C A 114 47.949 30.282 106.905 1.00 57.18 O
TER
ATOM 1 O3' C B 11 52.864 37.344 111.547 1.00 52.71 O
ATOM 2 P A B 12 54.333 36.847 111.945 1.00 53.56 P
ATOM 3 OP1 A B 12 54.190 35.834 113.015 1.00 55.25 O
ATOM 4 OP2 A B 12 55.185 38.039 112.189 1.00 54.80 O
ATOM 5 O5' A B 12 54.837 36.123 110.622 1.00 52.70 O
ATOM 6 C5' A B 12 54.753 34.702 110.484 1.00 50.91 C
ATOM 7 C4' A B 12 55.475 34.260 109.237 1.00 50.64 C
ATOM 8 O4' A B 12 54.696 34.643 108.069 1.00 49.75 O
ATOM 9 C3' A B 12 56.870 34.847 109.031 1.00 49.41 C
ATOM 10 O3' A B 12 57.686 33.876 108.383 1.00 48.84 O
ATOM 11 C2' A B 12 56.587 35.995 108.065 1.00 50.46 C
ATOM 12 O2' A B 12 57.676 36.394 107.261 1.00 50.60 O
ATOM 13 C1' A B 12 55.521 35.362 107.182 1.00 50.79 C
ATOM 14 N9 A B 12 54.718 36.331 106.439 1.00 50.56 N
ATOM 15 C8 A B 12 53.619 37.045 106.845 1.00 49.22 C
ATOM 16 N7 A B 12 53.147 37.852 105.927 1.00 48.25 N
ATOM 17 C5 A B 12 53.989 37.653 104.844 1.00 48.83 C
ATOM 18 C6 A B 12 54.021 38.213 103.560 1.00 48.86 C
ATOM 19 N6 A B 12 53.158 39.136 103.141 1.00 49.57 N
ATOM 20 N1 A B 12 54.984 37.790 102.712 1.00 49.79 N
ATOM 21 C2 A B 12 55.858 36.870 103.143 1.00 50.77 C
ATOM 22 N3 A B 12 55.935 36.273 104.331 1.00 50.42 N
ATOM 23 C4 A B 12 54.958 36.714 105.143 1.00 49.83 C
ATOM 24 P G B 13 59.025 33.343 109.095 1.00 49.30 P
ATOM 25 OP1 G B 13 59.462 32.162 108.317 1.00 48.60 O
ATOM 26 OP2 G B 13 58.778 33.213 110.552 1.00 48.78 O
ATOM 27 O5' G B 13 60.109 34.495 108.863 1.00 51.18 O
TER
ATOM 2 P G A 113 54.240 29.480 111.724 1.00 55.95 P
ATOM 3 OP1 G A 113 53.250 28.444 112.122 1.00 56.10 O
ATOM 4 OP2 G A 113 55.450 29.089 110.949 1.00 55.72 O
ATOM 5 O5' G A 113 53.453 30.598 110.913 1.00 55.83 O
ATOM 6 C5' G A 113 52.539 30.245 109.872 1.00 54.67 C
ATOM 7 C4' G A 113 51.671 31.427 109.528 1.00 54.80 C
ATOM 8 O4' G A 113 52.500 32.543 109.103 1.00 53.70 O
ATOM 9 C3' G A 113 50.727 31.184 108.366 1.00 54.43 C
ATOM 10 O3' G A 113 49.551 30.534 108.830 1.00 55.91 O
ATOM 11 C2' G A 113 50.481 32.596 107.852 1.00 52.91 C
ATOM 12 O2' G A 113 49.553 33.306 108.651 1.00 51.47 O
ATOM 13 C1' G A 113 51.870 33.220 108.026 1.00 51.91 C
ATOM 14 N9 G A 113 52.731 33.107 106.847 1.00 50.19 N
ATOM 15 C8 G A 113 53.833 32.296 106.692 1.00 48.72 C
ATOM 16 N7 G A 113 54.403 32.421 105.524 1.00 47.14 N
ATOM 17 C5 G A 113 53.631 33.367 104.864 1.00 47.64 C
ATOM 18 C6 G A 113 53.755 33.906 103.558 1.00 46.86 C
ATOM 19 O6 G A 113 54.600 33.644 102.692 1.00 46.26 O
ATOM 20 N1 G A 113 52.754 34.837 103.293 1.00 45.88 N
ATOM 21 C2 G A 113 51.763 35.203 104.166 1.00 45.30 C
ATOM 22 N2 G A 113 50.890 36.105 103.726 1.00 43.77 N
ATOM 23 N3 G A 113 51.637 34.714 105.385 1.00 48.07 N
ATOM 24 C4 G A 113 52.597 33.804 105.667 1.00 49.31 C
ATOM 25 P C A 114 48.833 29.424 107.916 1.00 58.98 P
ATOM 26 OP1 C A 114 47.908 28.681 108.814 1.00 59.41 O
ATOM 27 OP2 C A 114 49.852 28.676 107.126 1.00 56.71 O
ATOM 28 O5' C A 114 47.949 30.282 106.905 1.00 57.18 O
TER
ATOM 1 O3' C B 11 52.864 37.344 111.547 1.00 52.71 O
ATOM 2 P A B 12 54.333 36.847 111.945 1.00 53.56 P
ATOM 3 OP1 A B 12 54.190 35.834 113.015 1.00 55.25 O
ATOM 4 OP2 A B 12 55.185 38.039 112.189 1.00 54.80 O
ATOM 5 O5' A B 12 54.837 36.123 110.622 1.00 52.70 O
ATOM 6 C5' A B 12 54.753 34.702 110.484 1.00 50.91 C
ATOM 7 C4' A B 12 55.475 34.260 109.237 1.00 50.64 C
ATOM 8 O4' A B 12 54.696 34.643 108.069 1.00 49.75 O
ATOM 9 C3' A B 12 56.870 34.847 109.031 1.00 49.41 C
ATOM 10 O3' A B 12 57.686 33.876 108.383 1.00 48.84 O
ATOM 11 C2' A B 12 56.587 35.995 108.065 1.00 50.46 C
ATOM 12 O2' A B 12 57.676 36.394 107.261 1.00 50.60 O
ATOM 13 C1' A B 12 55.521 35.362 107.182 1.00 50.79 C
ATOM 14 N9 A B 12 54.718 36.331 106.439 1.00 50.56 N
ATOM 15 C8 A B 12 53.619 37.045 106.845 1.00 49.22 C
ATOM 16 N7 A B 12 53.147 37.852 105.927 1.00 48.25 N
ATOM 17 C5 A B 12 53.989 37.653 104.844 1.00 48.83 C
ATOM 18 C6 A B 12 54.021 38.213 103.560 1.00 48.86 C
ATOM 19 N6 A B 12 53.158 39.136 103.141 1.00 49.57 N
ATOM 20 N1 A B 12 54.984 37.790 102.712 1.00 49.79 N
ATOM 21 C2 A B 12 55.858 36.870 103.143 1.00 50.77 C
ATOM 22 N3 A B 12 55.935 36.273 104.331 1.00 50.42 N
ATOM 23 C4 A B 12 54.958 36.714 105.143 1.00 49.83 C
ATOM 24 P G B 13 59.025 33.343 109.095 1.00 49.30 P
ATOM 25 OP1 G B 13 59.462 32.162 108.317 1.00 48.60 O
ATOM 26 OP2 G B 13 58.778 33.213 110.552 1.00 48.78 O
ATOM 27 O5' G B 13 60.109 34.495 108.863 1.00 51.18 O
TER
Atoms:
OP1: (53.250,28.444,112.122)
OP2: (55.450,29.089,110.949)
C3': (50.727,31.184,108.366)
C1': (51.870,33.220,108.026)
C5': (52.539,30.245,109.872)
O6: (54.600,33.644,102.692)
O4': (52.500,32.543,109.103)
C8: (53.833,32.296,106.692)
C2: (51.763,35.203,104.166)
C6: (53.755,33.906,103.558)
C5: (53.631,33.367,104.864)
C4: (52.597,33.804,105.667)
P: (54.240,29.480,111.724)
C4': (51.671,31.427,109.528)
C2': (50.481,32.596,107.852)
O2': (49.553,33.306,108.651)
N1: (52.754,34.837,103.293)
N2: (50.890,36.105,103.726)
N3: (51.637,34.714,105.385)
N7: (54.403,32.421,105.524)
N9: (52.731,33.107,106.847)
O5': (53.453,30.598,110.913)
O3': (49.551,30.534,108.830)
OP2: (55.450,29.089,110.949)
C3': (50.727,31.184,108.366)
C1': (51.870,33.220,108.026)
C5': (52.539,30.245,109.872)
O6: (54.600,33.644,102.692)
O4': (52.500,32.543,109.103)
C8: (53.833,32.296,106.692)
C2: (51.763,35.203,104.166)
C6: (53.755,33.906,103.558)
C5: (53.631,33.367,104.864)
C4: (52.597,33.804,105.667)
P: (54.240,29.480,111.724)
C4': (51.671,31.427,109.528)
C2': (50.481,32.596,107.852)
O2': (49.553,33.306,108.651)
N1: (52.754,34.837,103.293)
N2: (50.890,36.105,103.726)
N3: (51.637,34.714,105.385)
N7: (54.403,32.421,105.524)
N9: (52.731,33.107,106.847)
O5': (53.453,30.598,110.913)
O3': (49.551,30.534,108.830)
OP1: (54.190,35.834,113.015)
OP2: (55.185,38.039,112.189)
C3': (56.870,34.847,109.031)
C1': (55.521,35.362,107.182)
C5': (54.753,34.702,110.484)
O4': (54.696,34.643,108.069)
C8: (53.619,37.045,106.845)
O2': (57.676,36.394,107.261)
C6: (54.021,38.213,103.560)
C5: (53.989,37.653,104.844)
C4: (54.958,36.714,105.143)
P: (54.333,36.847,111.945)
C4': (55.475,34.260,109.237)
C2': (56.587,35.995,108.065)
C2: (55.858,36.870,103.143)
N1: (54.984,37.790,102.712)
N3: (55.935,36.273,104.331)
N6: (53.158,39.136,103.141)
N7: (53.147,37.852,105.927)
N9: (54.718,36.331,106.439)
O5': (54.837,36.123,110.622)
O3': (57.686,33.876,108.383)
OP2: (55.185,38.039,112.189)
C3': (56.870,34.847,109.031)
C1': (55.521,35.362,107.182)
C5': (54.753,34.702,110.484)
O4': (54.696,34.643,108.069)
C8: (53.619,37.045,106.845)
O2': (57.676,36.394,107.261)
C6: (54.021,38.213,103.560)
C5: (53.989,37.653,104.844)
C4: (54.958,36.714,105.143)
P: (54.333,36.847,111.945)
C4': (55.475,34.260,109.237)
C2': (56.587,35.995,108.065)
C2: (55.858,36.870,103.143)
N1: (54.984,37.790,102.712)
N3: (55.935,36.273,104.331)
N6: (53.158,39.136,103.141)
N7: (53.147,37.852,105.927)
N9: (54.718,36.331,106.439)
O5': (54.837,36.123,110.622)
O3': (57.686,33.876,108.383)
Image (generated by PyMOL):