ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UXC:A1217:A1215

Extra

PDB:
ATOM 1 O3' U A1216 247.355 134.794 -14.434 1.00 66.26 O
ATOM 2 P G A1217 248.170 135.013 -13.078 1.00 58.70 P
ATOM 3 OP1 G A1217 247.178 135.264 -12.003 1.00 63.27 O
ATOM 4 OP2 G A1217 249.208 136.020 -13.366 1.00 63.27 O
ATOM 5 O5' G A1217 248.876 133.617 -12.780 1.00 58.70 O
ATOM 6 C5' G A1217 248.113 132.410 -12.751 1.00 58.70 C
ATOM 7 C4' G A1217 248.998 131.237 -12.423 1.00 58.70 C
ATOM 8 O4' G A1217 249.990 131.060 -13.460 1.00 58.70 O
ATOM 9 C3' G A1217 249.793 131.379 -11.146 1.00 58.70 C
ATOM 10 O3' G A1217 249.016 130.966 -10.047 1.00 58.70 O
ATOM 11 C2' G A1217 250.976 130.454 -11.383 1.00 58.70 C
ATOM 12 O2' G A1217 250.666 129.108 -11.108 1.00 58.70 O
ATOM 13 C1' G A1217 251.211 130.635 -12.884 1.00 58.70 C
ATOM 14 N9 G A1217 252.233 131.641 -13.175 1.00 63.27 N
ATOM 15 C8 G A1217 252.043 132.920 -13.649 1.00 63.27 C
ATOM 16 N7 G A1217 253.160 133.570 -13.823 1.00 63.27 N
ATOM 17 C5 G A1217 254.144 132.668 -13.446 1.00 63.27 C
ATOM 18 C6 G A1217 255.553 132.792 -13.451 1.00 63.27 C
ATOM 19 O6 G A1217 256.244 133.760 -13.810 1.00 63.27 O
ATOM 20 N1 G A1217 256.167 131.630 -12.991 1.00 63.27 N
ATOM 21 C2 G A1217 255.512 130.498 -12.587 1.00 63.27 C
ATOM 22 N2 G A1217 256.274 129.477 -12.181 1.00 63.27 N
ATOM 23 N3 G A1217 254.205 130.371 -12.585 1.00 63.27 N
ATOM 24 C4 G A1217 253.587 131.482 -13.029 1.00 63.27 C
ATOM 25 P C A1218 249.290 131.593 -8.602 1.00 59.66 P
ATOM 26 OP1 C A1218 248.193 131.153 -7.697 1.00 57.06 O
ATOM 27 OP2 C A1218 249.542 133.049 -8.796 1.00 57.06 O
ATOM 28 O5' C A1218 250.612 130.847 -8.133 1.00 59.66 O
TER

ATOM 1 O3' A B1214 248.819 126.957 -16.266 1.00 57.14 O
ATOM 2 P A B1215 249.624 127.536 -17.518 1.00 61.13 P
ATOM 3 OP1 A B1215 248.680 128.249 -18.412 1.00 57.42 O
ATOM 4 OP2 A B1215 250.437 126.405 -18.045 1.00 57.42 O
ATOM 5 O5' A B1215 250.602 128.615 -16.878 1.00 61.13 O
ATOM 6 C5' A B1215 250.096 129.873 -16.398 1.00 61.13 C
ATOM 7 C4' A B1215 251.131 130.955 -16.585 1.00 61.13 C
ATOM 8 O4' A B1215 252.330 130.600 -15.844 1.00 61.13 O
ATOM 9 C3' A B1215 251.576 131.201 -18.022 1.00 61.13 C
ATOM 10 O3' A B1215 251.816 132.590 -18.177 1.00 61.13 O
ATOM 11 C2' A B1215 252.900 130.444 -18.104 1.00 61.13 C
ATOM 12 O2' A B1215 253.813 130.948 -19.052 1.00 61.13 O
ATOM 13 C1' A B1215 253.444 130.659 -16.701 1.00 61.13 C
ATOM 14 N9 A B1215 254.431 129.683 -16.262 1.00 57.42 N
ATOM 15 C8 A B1215 254.265 128.367 -15.910 1.00 57.42 C
ATOM 16 N7 A B1215 255.377 127.772 -15.550 1.00 57.42 N
ATOM 17 C5 A B1215 256.340 128.765 -15.680 1.00 57.42 C
ATOM 18 C6 A B1215 257.731 128.773 -15.469 1.00 57.42 C
ATOM 19 N6 A B1215 258.426 127.700 -15.072 1.00 57.42 N
ATOM 20 N1 A B1215 258.395 129.932 -15.689 1.00 57.42 N
ATOM 21 C2 A B1215 257.702 130.999 -16.101 1.00 57.42 C
ATOM 22 N3 A B1215 256.400 131.114 -16.344 1.00 57.42 N
ATOM 23 C4 A B1215 255.769 129.947 -16.113 1.00 57.42 C
ATOM 24 P U B1216 250.804 133.482 -19.039 1.00 66.26 P
ATOM 25 OP1 U B1216 250.127 132.555 -19.976 1.00 60.14 O
ATOM 26 OP2 U B1216 251.524 134.670 -19.571 1.00 60.14 O
ATOM 27 O5' U B1216 249.716 133.971 -17.980 1.00 66.26 O
TER

Atoms:
OP1: (247.178,135.264,-12.003)
OP2: (249.208,136.020,-13.366)
C3': (249.793,131.379,-11.146)
C1': (251.211,130.635,-12.884)
C5': (248.113,132.410,-12.751)
O6: (256.244,133.760,-13.810)
O4': (249.990,131.060,-13.460)
C8: (252.043,132.920,-13.649)
C2: (255.512,130.498,-12.587)
C6: (255.553,132.792,-13.451)
C5: (254.144,132.668,-13.446)
C4: (253.587,131.482,-13.029)
P: (248.170,135.013,-13.078)
C4': (248.998,131.237,-12.423)
C2': (250.976,130.454,-11.383)
O2': (250.666,129.108,-11.108)
N1: (256.167,131.630,-12.991)
N2: (256.274,129.477,-12.181)
N3: (254.205,130.371,-12.585)
N7: (253.160,133.570,-13.823)
N9: (252.233,131.641,-13.175)
O5': (248.876,133.617,-12.780)
O3': (249.016,130.966,-10.047)
OP1: (248.680,128.249,-18.412)
OP2: (250.437,126.405,-18.045)
C3': (251.576,131.201,-18.022)
C1': (253.444,130.659,-16.701)
C5': (250.096,129.873,-16.398)
O4': (252.330,130.600,-15.844)
C8: (254.265,128.367,-15.910)
O2': (253.813,130.948,-19.052)
C6: (257.731,128.773,-15.469)
C5: (256.340,128.765,-15.680)
C4: (255.769,129.947,-16.113)
P: (249.624,127.536,-17.518)
C4': (251.131,130.955,-16.585)
C2': (252.900,130.444,-18.104)
C2: (257.702,130.999,-16.101)
N1: (258.395,129.932,-15.689)
N3: (256.400,131.114,-16.344)
N6: (258.426,127.700,-15.072)
N7: (255.377,127.772,-15.550)
N9: (254.431,129.683,-16.262)
O5': (250.602,128.615,-16.878)
O3': (251.816,132.590,-18.177)
Image (generated by PyMOL):
PyMOL image
show in jmol