Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21223:21224
Extra
PDB:
ATOM 1 O3' U A1222 -48.380 -51.703 15.354 1.00115.43 O
ATOM 2 P G A1223 -47.585 -52.858 16.120 1.00 98.21 P
ATOM 3 OP1 G A1223 -47.422 -52.408 17.518 1.00 97.73 O
ATOM 4 OP2 G A1223 -46.377 -53.160 15.329 1.00 98.41 O
ATOM 5 O5' G A1223 -48.588 -54.083 16.071 1.00 98.45 O
ATOM 6 C5' G A1223 -48.448 -55.134 17.006 1.00 98.31 C
ATOM 7 C4' G A1223 -49.764 -55.772 17.369 1.00 98.40 C
ATOM 8 O4' G A1223 -50.499 -54.975 18.331 1.00 98.10 O
ATOM 9 C3' G A1223 -50.773 -55.974 16.265 1.00 98.83 C
ATOM 10 O3' G A1223 -50.402 -56.998 15.360 1.00 99.20 O
ATOM 11 C2' G A1223 -52.019 -56.312 17.076 1.00 98.78 C
ATOM 12 O2' G A1223 -51.993 -57.679 17.462 1.00 98.87 O
ATOM 13 C1' G A1223 -51.824 -55.446 18.342 1.00 98.29 C
ATOM 14 N9 G A1223 -52.789 -54.318 18.435 1.00 98.22 N
ATOM 15 C8 G A1223 -54.191 -54.494 18.326 1.00 98.45 C
ATOM 16 N7 G A1223 -54.936 -53.421 18.475 1.00 98.38 N
ATOM 17 C5 G A1223 -53.943 -52.460 18.718 1.00 98.06 C
ATOM 18 C6 G A1223 -54.115 -51.082 18.956 1.00 97.86 C
ATOM 19 O6 G A1223 -55.156 -50.435 18.999 1.00 97.93 O
ATOM 20 N1 G A1223 -52.905 -50.447 19.159 1.00 97.58 N
ATOM 21 C2 G A1223 -51.666 -51.038 19.143 1.00 97.50 C
ATOM 22 N2 G A1223 -50.639 -50.190 19.384 1.00 97.22 N
ATOM 23 N3 G A1223 -51.482 -52.342 18.914 1.00 97.69 N
ATOM 24 C4 G A1223 -52.641 -52.983 18.718 1.00 97.96 C
ATOM 25 P A A1224 -50.748 -56.879 13.791 1.00 92.86 P
ATOM 26 OP1 A A1224 -50.401 -58.174 13.180 1.00 93.19 O
ATOM 27 OP2 A A1224 -50.098 -55.658 13.282 1.00 92.80 O
ATOM 28 O5' A A1224 -52.324 -56.686 13.782 1.00 93.00 O
TER
ATOM 1 O3' G B1223 -50.402 -56.998 15.360 1.00 99.20 O
ATOM 2 P A B1224 -50.748 -56.879 13.791 1.00 92.86 P
ATOM 3 OP1 A B1224 -50.401 -58.174 13.180 1.00 93.19 O
ATOM 4 OP2 A B1224 -50.098 -55.658 13.282 1.00 92.80 O
ATOM 5 O5' A B1224 -52.324 -56.686 13.782 1.00 93.00 O
ATOM 6 C5' A B1224 -53.193 -57.774 14.062 1.00 93.16 C
ATOM 7 C4' A B1224 -54.634 -57.355 13.991 1.00 93.30 C
ATOM 8 O4' A B1224 -54.947 -56.491 15.108 1.00 92.90 O
ATOM 9 C3' A B1224 -55.025 -56.553 12.758 1.00 93.64 C
ATOM 10 O3' A B1224 -55.318 -57.391 11.645 1.00 94.13 O
ATOM 11 C2' A B1224 -56.220 -55.742 13.251 1.00 93.56 C
ATOM 12 O2' A B1224 -57.412 -56.527 13.231 1.00 93.85 O
ATOM 13 C1' A B1224 -55.840 -55.484 14.709 1.00 93.03 C
ATOM 14 N9 A B1224 -55.178 -54.187 14.903 1.00 92.73 N
ATOM 15 C8 A B1224 -53.841 -53.977 14.790 1.00 92.55 C
ATOM 16 N7 A B1224 -53.467 -52.745 15.045 1.00 92.29 N
ATOM 17 C5 A B1224 -54.649 -52.100 15.353 1.00 92.29 C
ATOM 18 C6 A B1224 -54.906 -50.776 15.708 1.00 92.09 C
ATOM 19 N6 A B1224 -53.930 -49.878 15.803 1.00 91.84 N
ATOM 20 N1 A B1224 -56.181 -50.406 15.960 1.00 92.18 N
ATOM 21 C2 A B1224 -57.119 -51.343 15.861 1.00 92.45 C
ATOM 22 N3 A B1224 -56.995 -52.630 15.530 1.00 92.65 N
ATOM 23 C4 A B1224 -55.714 -52.968 15.282 1.00 92.56 C
ATOM 24 P G B1225 -55.135 -56.869 10.140 1.00123.98 P
ATOM 25 OP1 G B1225 -54.263 -57.844 9.447 1.00124.20 O
ATOM 26 OP2 G B1225 -54.719 -55.462 10.212 1.00123.75 O
ATOM 27 O5' G B1225 -56.607 -56.963 9.555 1.00124.41 O
TER
ATOM 2 P G A1223 -47.585 -52.858 16.120 1.00 98.21 P
ATOM 3 OP1 G A1223 -47.422 -52.408 17.518 1.00 97.73 O
ATOM 4 OP2 G A1223 -46.377 -53.160 15.329 1.00 98.41 O
ATOM 5 O5' G A1223 -48.588 -54.083 16.071 1.00 98.45 O
ATOM 6 C5' G A1223 -48.448 -55.134 17.006 1.00 98.31 C
ATOM 7 C4' G A1223 -49.764 -55.772 17.369 1.00 98.40 C
ATOM 8 O4' G A1223 -50.499 -54.975 18.331 1.00 98.10 O
ATOM 9 C3' G A1223 -50.773 -55.974 16.265 1.00 98.83 C
ATOM 10 O3' G A1223 -50.402 -56.998 15.360 1.00 99.20 O
ATOM 11 C2' G A1223 -52.019 -56.312 17.076 1.00 98.78 C
ATOM 12 O2' G A1223 -51.993 -57.679 17.462 1.00 98.87 O
ATOM 13 C1' G A1223 -51.824 -55.446 18.342 1.00 98.29 C
ATOM 14 N9 G A1223 -52.789 -54.318 18.435 1.00 98.22 N
ATOM 15 C8 G A1223 -54.191 -54.494 18.326 1.00 98.45 C
ATOM 16 N7 G A1223 -54.936 -53.421 18.475 1.00 98.38 N
ATOM 17 C5 G A1223 -53.943 -52.460 18.718 1.00 98.06 C
ATOM 18 C6 G A1223 -54.115 -51.082 18.956 1.00 97.86 C
ATOM 19 O6 G A1223 -55.156 -50.435 18.999 1.00 97.93 O
ATOM 20 N1 G A1223 -52.905 -50.447 19.159 1.00 97.58 N
ATOM 21 C2 G A1223 -51.666 -51.038 19.143 1.00 97.50 C
ATOM 22 N2 G A1223 -50.639 -50.190 19.384 1.00 97.22 N
ATOM 23 N3 G A1223 -51.482 -52.342 18.914 1.00 97.69 N
ATOM 24 C4 G A1223 -52.641 -52.983 18.718 1.00 97.96 C
ATOM 25 P A A1224 -50.748 -56.879 13.791 1.00 92.86 P
ATOM 26 OP1 A A1224 -50.401 -58.174 13.180 1.00 93.19 O
ATOM 27 OP2 A A1224 -50.098 -55.658 13.282 1.00 92.80 O
ATOM 28 O5' A A1224 -52.324 -56.686 13.782 1.00 93.00 O
TER
ATOM 1 O3' G B1223 -50.402 -56.998 15.360 1.00 99.20 O
ATOM 2 P A B1224 -50.748 -56.879 13.791 1.00 92.86 P
ATOM 3 OP1 A B1224 -50.401 -58.174 13.180 1.00 93.19 O
ATOM 4 OP2 A B1224 -50.098 -55.658 13.282 1.00 92.80 O
ATOM 5 O5' A B1224 -52.324 -56.686 13.782 1.00 93.00 O
ATOM 6 C5' A B1224 -53.193 -57.774 14.062 1.00 93.16 C
ATOM 7 C4' A B1224 -54.634 -57.355 13.991 1.00 93.30 C
ATOM 8 O4' A B1224 -54.947 -56.491 15.108 1.00 92.90 O
ATOM 9 C3' A B1224 -55.025 -56.553 12.758 1.00 93.64 C
ATOM 10 O3' A B1224 -55.318 -57.391 11.645 1.00 94.13 O
ATOM 11 C2' A B1224 -56.220 -55.742 13.251 1.00 93.56 C
ATOM 12 O2' A B1224 -57.412 -56.527 13.231 1.00 93.85 O
ATOM 13 C1' A B1224 -55.840 -55.484 14.709 1.00 93.03 C
ATOM 14 N9 A B1224 -55.178 -54.187 14.903 1.00 92.73 N
ATOM 15 C8 A B1224 -53.841 -53.977 14.790 1.00 92.55 C
ATOM 16 N7 A B1224 -53.467 -52.745 15.045 1.00 92.29 N
ATOM 17 C5 A B1224 -54.649 -52.100 15.353 1.00 92.29 C
ATOM 18 C6 A B1224 -54.906 -50.776 15.708 1.00 92.09 C
ATOM 19 N6 A B1224 -53.930 -49.878 15.803 1.00 91.84 N
ATOM 20 N1 A B1224 -56.181 -50.406 15.960 1.00 92.18 N
ATOM 21 C2 A B1224 -57.119 -51.343 15.861 1.00 92.45 C
ATOM 22 N3 A B1224 -56.995 -52.630 15.530 1.00 92.65 N
ATOM 23 C4 A B1224 -55.714 -52.968 15.282 1.00 92.56 C
ATOM 24 P G B1225 -55.135 -56.869 10.140 1.00123.98 P
ATOM 25 OP1 G B1225 -54.263 -57.844 9.447 1.00124.20 O
ATOM 26 OP2 G B1225 -54.719 -55.462 10.212 1.00123.75 O
ATOM 27 O5' G B1225 -56.607 -56.963 9.555 1.00124.41 O
TER
Atoms:
OP1: (-47.422,-52.408,17.518)
OP2: (-46.377,-53.160,15.329)
C3': (-50.773,-55.974,16.265)
C1': (-51.824,-55.446,18.342)
C5': (-48.448,-55.134,17.006)
O6: (-55.156,-50.435,18.999)
O4': (-50.499,-54.975,18.331)
C8: (-54.191,-54.494,18.326)
C2: (-51.666,-51.038,19.143)
C6: (-54.115,-51.082,18.956)
C5: (-53.943,-52.460,18.718)
C4: (-52.641,-52.983,18.718)
P: (-47.585,-52.858,16.120)
C4': (-49.764,-55.772,17.369)
C2': (-52.019,-56.312,17.076)
O2': (-51.993,-57.679,17.462)
N1: (-52.905,-50.447,19.159)
N2: (-50.639,-50.190,19.384)
N3: (-51.482,-52.342,18.914)
N7: (-54.936,-53.421,18.475)
N9: (-52.789,-54.318,18.435)
O5': (-48.588,-54.083,16.071)
O3': (-50.402,-56.998,15.360)
OP2: (-46.377,-53.160,15.329)
C3': (-50.773,-55.974,16.265)
C1': (-51.824,-55.446,18.342)
C5': (-48.448,-55.134,17.006)
O6: (-55.156,-50.435,18.999)
O4': (-50.499,-54.975,18.331)
C8: (-54.191,-54.494,18.326)
C2: (-51.666,-51.038,19.143)
C6: (-54.115,-51.082,18.956)
C5: (-53.943,-52.460,18.718)
C4: (-52.641,-52.983,18.718)
P: (-47.585,-52.858,16.120)
C4': (-49.764,-55.772,17.369)
C2': (-52.019,-56.312,17.076)
O2': (-51.993,-57.679,17.462)
N1: (-52.905,-50.447,19.159)
N2: (-50.639,-50.190,19.384)
N3: (-51.482,-52.342,18.914)
N7: (-54.936,-53.421,18.475)
N9: (-52.789,-54.318,18.435)
O5': (-48.588,-54.083,16.071)
O3': (-50.402,-56.998,15.360)
OP1: (-50.401,-58.174,13.180)
OP2: (-50.098,-55.658,13.282)
C3': (-55.025,-56.553,12.758)
C1': (-55.840,-55.484,14.709)
C5': (-53.193,-57.774,14.062)
O4': (-54.947,-56.491,15.108)
C8: (-53.841,-53.977,14.790)
O2': (-57.412,-56.527,13.231)
C6: (-54.906,-50.776,15.708)
C5: (-54.649,-52.100,15.353)
C4: (-55.714,-52.968,15.282)
P: (-50.748,-56.879,13.791)
C4': (-54.634,-57.355,13.991)
C2': (-56.220,-55.742,13.251)
C2: (-57.119,-51.343,15.861)
N1: (-56.181,-50.406,15.960)
N3: (-56.995,-52.630,15.530)
N6: (-53.930,-49.878,15.803)
N7: (-53.467,-52.745,15.045)
N9: (-55.178,-54.187,14.903)
O5': (-52.324,-56.686,13.782)
O3': (-55.318,-57.391,11.645)
OP2: (-50.098,-55.658,13.282)
C3': (-55.025,-56.553,12.758)
C1': (-55.840,-55.484,14.709)
C5': (-53.193,-57.774,14.062)
O4': (-54.947,-56.491,15.108)
C8: (-53.841,-53.977,14.790)
O2': (-57.412,-56.527,13.231)
C6: (-54.906,-50.776,15.708)
C5: (-54.649,-52.100,15.353)
C4: (-55.714,-52.968,15.282)
P: (-50.748,-56.879,13.791)
C4': (-54.634,-57.355,13.991)
C2': (-56.220,-55.742,13.251)
C2: (-57.119,-51.343,15.861)
N1: (-56.181,-50.406,15.960)
N3: (-56.995,-52.630,15.530)
N6: (-53.930,-49.878,15.803)
N7: (-53.467,-52.745,15.045)
N9: (-55.178,-54.187,14.903)
O5': (-52.324,-56.686,13.782)
O3': (-55.318,-57.391,11.645)
Image (generated by PyMOL):