Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:3111:312
Extra
PDB:
ATOM 1 O3' U A 110 26.027 -70.324 9.196 1.00 67.41 O
ATOM 2 P G A 111 25.197 -71.680 9.273 1.00 77.56 P
ATOM 3 OP1 G A 111 25.538 -72.459 8.066 1.00 78.66 O
ATOM 4 OP2 G A 111 23.785 -71.312 9.521 1.00 77.45 O
ATOM 5 O5' G A 111 25.776 -72.388 10.544 1.00 76.91 O
ATOM 6 C5' G A 111 26.965 -73.123 10.472 1.00 77.09 C
ATOM 7 C4' G A 111 28.071 -72.396 11.151 1.00 76.17 C
ATOM 8 O4' G A 111 27.627 -71.908 12.434 1.00 75.17 O
ATOM 9 C3' G A 111 29.278 -73.221 11.480 1.00 76.13 C
ATOM 10 O3' G A 111 30.102 -73.417 10.358 1.00 76.86 O
ATOM 11 C2' G A 111 29.941 -72.411 12.575 1.00 74.96 C
ATOM 12 O2' G A 111 30.681 -71.345 11.997 1.00 74.81 O
ATOM 13 C1' G A 111 28.730 -71.812 13.299 1.00 74.40 C
ATOM 14 N9 G A 111 28.409 -72.486 14.576 1.00 73.88 N
ATOM 15 C8 G A 111 27.273 -73.214 14.844 1.00 74.17 C
ATOM 16 N7 G A 111 27.217 -73.647 16.080 1.00 73.56 N
ATOM 17 C5 G A 111 28.380 -73.146 16.684 1.00 72.78 C
ATOM 18 C6 G A 111 28.875 -73.287 18.014 1.00 71.91 C
ATOM 19 O6 G A 111 28.394 -73.887 18.970 1.00 71.62 O
ATOM 20 N1 G A 111 30.077 -72.654 18.197 1.00 71.35 N
ATOM 21 C2 G A 111 30.719 -71.955 17.224 1.00 71.60 C
ATOM 22 N2 G A 111 31.867 -71.402 17.607 1.00 70.97 N
ATOM 23 N3 G A 111 30.286 -71.792 15.985 1.00 72.40 N
ATOM 24 C4 G A 111 29.114 -72.417 15.770 1.00 72.97 C
ATOM 25 P C A 112 30.807 -74.825 10.151 1.00 75.27 P
ATOM 26 OP1 C A 112 31.185 -74.911 8.735 1.00 76.24 O
ATOM 27 OP2 C A 112 29.894 -75.852 10.715 1.00 75.44 O
ATOM 28 O5' C A 112 32.113 -74.691 11.055 1.00 74.42 O
TER
ATOM 1 O3' U B 11 25.813 -67.633 11.556 1.00 68.45 O
ATOM 2 P A B 12 24.332 -68.027 11.871 1.00 67.82 P
ATOM 3 OP1 A B 12 23.642 -68.341 10.572 1.00 68.90 O
ATOM 4 OP2 A B 12 23.800 -66.944 12.736 1.00 66.92 O
ATOM 5 O5' A B 12 24.483 -69.344 12.704 1.00 67.76 O
ATOM 6 C5' A B 12 24.008 -69.315 13.997 1.00 66.98 C
ATOM 7 C4' A B 12 23.626 -70.629 14.530 1.00 67.22 C
ATOM 8 O4' A B 12 24.832 -71.273 14.984 1.00 67.00 O
ATOM 9 C3' A B 12 22.805 -70.440 15.765 1.00 66.49 C
ATOM 10 O3' A B 12 22.200 -71.634 16.151 1.00 66.83 O
ATOM 11 C2' A B 12 23.856 -70.077 16.778 1.00 65.53 C
ATOM 12 O2' A B 12 23.456 -70.261 18.114 1.00 64.83 O
ATOM 13 C1' A B 12 24.983 -71.030 16.387 1.00 65.97 C
ATOM 14 N9 A B 12 26.304 -70.450 16.653 1.00 65.36 N
ATOM 15 C8 A B 12 27.172 -69.706 15.884 1.00 65.42 C
ATOM 16 N7 A B 12 28.242 -69.286 16.548 1.00 64.67 N
ATOM 17 C5 A B 12 28.035 -69.769 17.842 1.00 64.06 C
ATOM 18 C6 A B 12 28.779 -69.708 19.024 1.00 63.18 C
ATOM 19 N6 A B 12 29.949 -69.102 19.135 1.00 62.70 N
ATOM 20 N1 A B 12 28.300 -70.308 20.114 1.00 62.80 N
ATOM 21 C2 A B 12 27.136 -70.934 20.023 1.00 63.29 C
ATOM 22 N3 A B 12 26.354 -71.073 18.982 1.00 64.12 N
ATOM 23 C4 A B 12 26.859 -70.470 17.911 1.00 64.48 C
ATOM 24 P U B 13 20.679 -71.901 15.800 1.00 68.13 P
ATOM 25 OP1 U B 13 20.411 -73.269 16.275 1.00 68.44 O
ATOM 26 OP2 U B 13 20.511 -71.579 14.355 1.00 68.95 O
ATOM 27 O5' U B 13 19.825 -70.845 16.674 1.00 67.30 O
TER
ATOM 2 P G A 111 25.197 -71.680 9.273 1.00 77.56 P
ATOM 3 OP1 G A 111 25.538 -72.459 8.066 1.00 78.66 O
ATOM 4 OP2 G A 111 23.785 -71.312 9.521 1.00 77.45 O
ATOM 5 O5' G A 111 25.776 -72.388 10.544 1.00 76.91 O
ATOM 6 C5' G A 111 26.965 -73.123 10.472 1.00 77.09 C
ATOM 7 C4' G A 111 28.071 -72.396 11.151 1.00 76.17 C
ATOM 8 O4' G A 111 27.627 -71.908 12.434 1.00 75.17 O
ATOM 9 C3' G A 111 29.278 -73.221 11.480 1.00 76.13 C
ATOM 10 O3' G A 111 30.102 -73.417 10.358 1.00 76.86 O
ATOM 11 C2' G A 111 29.941 -72.411 12.575 1.00 74.96 C
ATOM 12 O2' G A 111 30.681 -71.345 11.997 1.00 74.81 O
ATOM 13 C1' G A 111 28.730 -71.812 13.299 1.00 74.40 C
ATOM 14 N9 G A 111 28.409 -72.486 14.576 1.00 73.88 N
ATOM 15 C8 G A 111 27.273 -73.214 14.844 1.00 74.17 C
ATOM 16 N7 G A 111 27.217 -73.647 16.080 1.00 73.56 N
ATOM 17 C5 G A 111 28.380 -73.146 16.684 1.00 72.78 C
ATOM 18 C6 G A 111 28.875 -73.287 18.014 1.00 71.91 C
ATOM 19 O6 G A 111 28.394 -73.887 18.970 1.00 71.62 O
ATOM 20 N1 G A 111 30.077 -72.654 18.197 1.00 71.35 N
ATOM 21 C2 G A 111 30.719 -71.955 17.224 1.00 71.60 C
ATOM 22 N2 G A 111 31.867 -71.402 17.607 1.00 70.97 N
ATOM 23 N3 G A 111 30.286 -71.792 15.985 1.00 72.40 N
ATOM 24 C4 G A 111 29.114 -72.417 15.770 1.00 72.97 C
ATOM 25 P C A 112 30.807 -74.825 10.151 1.00 75.27 P
ATOM 26 OP1 C A 112 31.185 -74.911 8.735 1.00 76.24 O
ATOM 27 OP2 C A 112 29.894 -75.852 10.715 1.00 75.44 O
ATOM 28 O5' C A 112 32.113 -74.691 11.055 1.00 74.42 O
TER
ATOM 1 O3' U B 11 25.813 -67.633 11.556 1.00 68.45 O
ATOM 2 P A B 12 24.332 -68.027 11.871 1.00 67.82 P
ATOM 3 OP1 A B 12 23.642 -68.341 10.572 1.00 68.90 O
ATOM 4 OP2 A B 12 23.800 -66.944 12.736 1.00 66.92 O
ATOM 5 O5' A B 12 24.483 -69.344 12.704 1.00 67.76 O
ATOM 6 C5' A B 12 24.008 -69.315 13.997 1.00 66.98 C
ATOM 7 C4' A B 12 23.626 -70.629 14.530 1.00 67.22 C
ATOM 8 O4' A B 12 24.832 -71.273 14.984 1.00 67.00 O
ATOM 9 C3' A B 12 22.805 -70.440 15.765 1.00 66.49 C
ATOM 10 O3' A B 12 22.200 -71.634 16.151 1.00 66.83 O
ATOM 11 C2' A B 12 23.856 -70.077 16.778 1.00 65.53 C
ATOM 12 O2' A B 12 23.456 -70.261 18.114 1.00 64.83 O
ATOM 13 C1' A B 12 24.983 -71.030 16.387 1.00 65.97 C
ATOM 14 N9 A B 12 26.304 -70.450 16.653 1.00 65.36 N
ATOM 15 C8 A B 12 27.172 -69.706 15.884 1.00 65.42 C
ATOM 16 N7 A B 12 28.242 -69.286 16.548 1.00 64.67 N
ATOM 17 C5 A B 12 28.035 -69.769 17.842 1.00 64.06 C
ATOM 18 C6 A B 12 28.779 -69.708 19.024 1.00 63.18 C
ATOM 19 N6 A B 12 29.949 -69.102 19.135 1.00 62.70 N
ATOM 20 N1 A B 12 28.300 -70.308 20.114 1.00 62.80 N
ATOM 21 C2 A B 12 27.136 -70.934 20.023 1.00 63.29 C
ATOM 22 N3 A B 12 26.354 -71.073 18.982 1.00 64.12 N
ATOM 23 C4 A B 12 26.859 -70.470 17.911 1.00 64.48 C
ATOM 24 P U B 13 20.679 -71.901 15.800 1.00 68.13 P
ATOM 25 OP1 U B 13 20.411 -73.269 16.275 1.00 68.44 O
ATOM 26 OP2 U B 13 20.511 -71.579 14.355 1.00 68.95 O
ATOM 27 O5' U B 13 19.825 -70.845 16.674 1.00 67.30 O
TER
Atoms:
OP1: (25.538,-72.459,8.066)
OP2: (23.785,-71.312,9.521)
C3': (29.278,-73.221,11.480)
C1': (28.730,-71.812,13.299)
C5': (26.965,-73.123,10.472)
O6: (28.394,-73.887,18.970)
O4': (27.627,-71.908,12.434)
C8: (27.273,-73.214,14.844)
C2: (30.719,-71.955,17.224)
C6: (28.875,-73.287,18.014)
C5: (28.380,-73.146,16.684)
C4: (29.114,-72.417,15.770)
P: (25.197,-71.680,9.273)
C4': (28.071,-72.396,11.151)
C2': (29.941,-72.411,12.575)
O2': (30.681,-71.345,11.997)
N1: (30.077,-72.654,18.197)
N2: (31.867,-71.402,17.607)
N3: (30.286,-71.792,15.985)
N7: (27.217,-73.647,16.080)
N9: (28.409,-72.486,14.576)
O5': (25.776,-72.388,10.544)
O3': (30.102,-73.417,10.358)
OP2: (23.785,-71.312,9.521)
C3': (29.278,-73.221,11.480)
C1': (28.730,-71.812,13.299)
C5': (26.965,-73.123,10.472)
O6: (28.394,-73.887,18.970)
O4': (27.627,-71.908,12.434)
C8: (27.273,-73.214,14.844)
C2: (30.719,-71.955,17.224)
C6: (28.875,-73.287,18.014)
C5: (28.380,-73.146,16.684)
C4: (29.114,-72.417,15.770)
P: (25.197,-71.680,9.273)
C4': (28.071,-72.396,11.151)
C2': (29.941,-72.411,12.575)
O2': (30.681,-71.345,11.997)
N1: (30.077,-72.654,18.197)
N2: (31.867,-71.402,17.607)
N3: (30.286,-71.792,15.985)
N7: (27.217,-73.647,16.080)
N9: (28.409,-72.486,14.576)
O5': (25.776,-72.388,10.544)
O3': (30.102,-73.417,10.358)
OP1: (23.642,-68.341,10.572)
OP2: (23.800,-66.944,12.736)
C3': (22.805,-70.440,15.765)
C1': (24.983,-71.030,16.387)
C5': (24.008,-69.315,13.997)
O4': (24.832,-71.273,14.984)
C8: (27.172,-69.706,15.884)
O2': (23.456,-70.261,18.114)
C6: (28.779,-69.708,19.024)
C5: (28.035,-69.769,17.842)
C4: (26.859,-70.470,17.911)
P: (24.332,-68.027,11.871)
C4': (23.626,-70.629,14.530)
C2': (23.856,-70.077,16.778)
C2: (27.136,-70.934,20.023)
N1: (28.300,-70.308,20.114)
N3: (26.354,-71.073,18.982)
N6: (29.949,-69.102,19.135)
N7: (28.242,-69.286,16.548)
N9: (26.304,-70.450,16.653)
O5': (24.483,-69.344,12.704)
O3': (22.200,-71.634,16.151)
OP2: (23.800,-66.944,12.736)
C3': (22.805,-70.440,15.765)
C1': (24.983,-71.030,16.387)
C5': (24.008,-69.315,13.997)
O4': (24.832,-71.273,14.984)
C8: (27.172,-69.706,15.884)
O2': (23.456,-70.261,18.114)
C6: (28.779,-69.708,19.024)
C5: (28.035,-69.769,17.842)
C4: (26.859,-70.470,17.911)
P: (24.332,-68.027,11.871)
C4': (23.626,-70.629,14.530)
C2': (23.856,-70.077,16.778)
C2: (27.136,-70.934,20.023)
N1: (28.300,-70.308,20.114)
N3: (26.354,-71.073,18.982)
N6: (29.949,-69.102,19.135)
N7: (28.242,-69.286,16.548)
N9: (26.304,-70.450,16.653)
O5': (24.483,-69.344,12.704)
O3': (22.200,-71.634,16.151)
Image (generated by PyMOL):