Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A503:A533
Extra
PDB:
ATOM 1 O3' C A 502 -55.851 62.350 75.042 1.00 9.25 O
ATOM 2 P G A 503 -56.683 63.612 75.631 1.00 15.21 P
ATOM 3 OP1 G A 503 -56.379 63.695 77.087 1.00 15.21 O
ATOM 4 OP2 G A 503 -58.107 63.459 75.201 1.00 15.21 O
ATOM 5 O5' G A 503 -56.009 64.848 74.874 1.00 15.21 O
ATOM 6 C5' G A 503 -56.475 65.302 73.613 1.00 15.21 C
ATOM 7 C4' G A 503 -55.989 66.707 73.321 1.00 15.21 C
ATOM 8 O4' G A 503 -56.264 67.580 74.458 1.00 15.21 O
ATOM 9 C3' G A 503 -54.492 66.876 73.103 1.00 15.21 C
ATOM 10 O3' G A 503 -54.070 66.502 71.809 1.00 15.21 O
ATOM 11 C2' G A 503 -54.283 68.352 73.384 1.00 15.21 C
ATOM 12 O2' G A 503 -54.658 69.127 72.249 1.00 15.21 O
ATOM 13 C1' G A 503 -55.287 68.604 74.517 1.00 15.21 C
ATOM 14 N9 G A 503 -54.641 68.590 75.847 1.00 14.94 N
ATOM 15 C8 G A 503 -54.998 67.871 76.954 1.00 14.94 C
ATOM 16 N7 G A 503 -54.227 68.061 77.989 1.00 14.94 N
ATOM 17 C5 G A 503 -53.305 68.983 77.538 1.00 14.94 C
ATOM 18 C6 G A 503 -52.216 69.582 78.219 1.00 14.94 C
ATOM 19 O6 G A 503 -51.859 69.400 79.386 1.00 14.94 O
ATOM 20 N1 G A 503 -51.523 70.475 77.414 1.00 14.94 N
ATOM 21 C2 G A 503 -51.847 70.746 76.117 1.00 14.94 C
ATOM 22 N2 G A 503 -51.052 71.616 75.511 1.00 14.94 N
ATOM 23 N3 G A 503 -52.851 70.198 75.458 1.00 14.94 N
ATOM 24 C4 G A 503 -53.543 69.326 76.226 1.00 14.94 C
ATOM 25 P G A 504 -52.913 65.407 71.637 1.00 8.53 P
ATOM 26 OP1 G A 504 -53.440 64.368 70.694 1.00 8.53 O
ATOM 27 OP2 G A 504 -52.501 65.001 72.993 1.00 8.53 O
ATOM 28 O5' G A 504 -51.727 66.205 70.950 1.00 8.53 O
TER
ATOM 1 O3' U B 532 -61.872 65.563 76.423 1.00 28.04 O
ATOM 2 P A B 533 -61.625 66.621 77.594 1.00 14.14 P
ATOM 3 OP1 A B 533 -62.009 65.953 78.870 1.00 14.14 O
ATOM 4 OP2 A B 533 -62.321 67.860 77.207 1.00 14.14 O
ATOM 5 O5' A B 533 -60.053 66.862 77.542 1.00 14.14 O
ATOM 6 C5' A B 533 -59.142 65.877 78.004 1.00 14.14 C
ATOM 7 C4' A B 533 -58.285 66.387 79.142 1.00 14.14 C
ATOM 8 O4' A B 533 -57.283 67.314 78.634 1.00 14.14 O
ATOM 9 C3' A B 533 -59.024 67.139 80.228 1.00 14.14 C
ATOM 10 O3' A B 533 -58.367 66.894 81.466 1.00 14.14 O
ATOM 11 C2' A B 533 -58.829 68.600 79.815 1.00 14.14 C
ATOM 12 O2' A B 533 -58.973 69.528 80.867 1.00 14.14 O
ATOM 13 C1' A B 533 -57.407 68.559 79.288 1.00 14.14 C
ATOM 14 N9 A B 533 -57.082 69.596 78.321 1.00 14.15 N
ATOM 15 C8 A B 533 -57.659 69.824 77.118 1.00 14.15 C
ATOM 16 N7 A B 533 -57.085 70.806 76.469 1.00 14.15 N
ATOM 17 C5 A B 533 -56.048 71.240 77.281 1.00 14.15 C
ATOM 18 C6 A B 533 -55.056 72.242 77.159 1.00 14.15 C
ATOM 19 N6 A B 533 -54.882 73.076 76.125 1.00 14.15 N
ATOM 20 N1 A B 533 -54.192 72.379 78.174 1.00 14.15 N
ATOM 21 C2 A B 533 -54.298 71.578 79.230 1.00 14.15 C
ATOM 22 N3 A B 533 -55.173 70.603 79.442 1.00 14.15 N
ATOM 23 C4 A B 533 -56.036 70.481 78.420 1.00 14.15 C
ATOM 24 P C B 534 -58.746 65.601 82.340 1.00 2.69 P
ATOM 25 OP1 C B 534 -57.485 65.121 82.991 1.00 2.69 O
ATOM 26 OP2 C B 534 -59.496 64.667 81.459 1.00 2.69 O
ATOM 27 O5' C B 534 -59.724 66.232 83.422 1.00 2.69 O
TER
ATOM 2 P G A 503 -56.683 63.612 75.631 1.00 15.21 P
ATOM 3 OP1 G A 503 -56.379 63.695 77.087 1.00 15.21 O
ATOM 4 OP2 G A 503 -58.107 63.459 75.201 1.00 15.21 O
ATOM 5 O5' G A 503 -56.009 64.848 74.874 1.00 15.21 O
ATOM 6 C5' G A 503 -56.475 65.302 73.613 1.00 15.21 C
ATOM 7 C4' G A 503 -55.989 66.707 73.321 1.00 15.21 C
ATOM 8 O4' G A 503 -56.264 67.580 74.458 1.00 15.21 O
ATOM 9 C3' G A 503 -54.492 66.876 73.103 1.00 15.21 C
ATOM 10 O3' G A 503 -54.070 66.502 71.809 1.00 15.21 O
ATOM 11 C2' G A 503 -54.283 68.352 73.384 1.00 15.21 C
ATOM 12 O2' G A 503 -54.658 69.127 72.249 1.00 15.21 O
ATOM 13 C1' G A 503 -55.287 68.604 74.517 1.00 15.21 C
ATOM 14 N9 G A 503 -54.641 68.590 75.847 1.00 14.94 N
ATOM 15 C8 G A 503 -54.998 67.871 76.954 1.00 14.94 C
ATOM 16 N7 G A 503 -54.227 68.061 77.989 1.00 14.94 N
ATOM 17 C5 G A 503 -53.305 68.983 77.538 1.00 14.94 C
ATOM 18 C6 G A 503 -52.216 69.582 78.219 1.00 14.94 C
ATOM 19 O6 G A 503 -51.859 69.400 79.386 1.00 14.94 O
ATOM 20 N1 G A 503 -51.523 70.475 77.414 1.00 14.94 N
ATOM 21 C2 G A 503 -51.847 70.746 76.117 1.00 14.94 C
ATOM 22 N2 G A 503 -51.052 71.616 75.511 1.00 14.94 N
ATOM 23 N3 G A 503 -52.851 70.198 75.458 1.00 14.94 N
ATOM 24 C4 G A 503 -53.543 69.326 76.226 1.00 14.94 C
ATOM 25 P G A 504 -52.913 65.407 71.637 1.00 8.53 P
ATOM 26 OP1 G A 504 -53.440 64.368 70.694 1.00 8.53 O
ATOM 27 OP2 G A 504 -52.501 65.001 72.993 1.00 8.53 O
ATOM 28 O5' G A 504 -51.727 66.205 70.950 1.00 8.53 O
TER
ATOM 1 O3' U B 532 -61.872 65.563 76.423 1.00 28.04 O
ATOM 2 P A B 533 -61.625 66.621 77.594 1.00 14.14 P
ATOM 3 OP1 A B 533 -62.009 65.953 78.870 1.00 14.14 O
ATOM 4 OP2 A B 533 -62.321 67.860 77.207 1.00 14.14 O
ATOM 5 O5' A B 533 -60.053 66.862 77.542 1.00 14.14 O
ATOM 6 C5' A B 533 -59.142 65.877 78.004 1.00 14.14 C
ATOM 7 C4' A B 533 -58.285 66.387 79.142 1.00 14.14 C
ATOM 8 O4' A B 533 -57.283 67.314 78.634 1.00 14.14 O
ATOM 9 C3' A B 533 -59.024 67.139 80.228 1.00 14.14 C
ATOM 10 O3' A B 533 -58.367 66.894 81.466 1.00 14.14 O
ATOM 11 C2' A B 533 -58.829 68.600 79.815 1.00 14.14 C
ATOM 12 O2' A B 533 -58.973 69.528 80.867 1.00 14.14 O
ATOM 13 C1' A B 533 -57.407 68.559 79.288 1.00 14.14 C
ATOM 14 N9 A B 533 -57.082 69.596 78.321 1.00 14.15 N
ATOM 15 C8 A B 533 -57.659 69.824 77.118 1.00 14.15 C
ATOM 16 N7 A B 533 -57.085 70.806 76.469 1.00 14.15 N
ATOM 17 C5 A B 533 -56.048 71.240 77.281 1.00 14.15 C
ATOM 18 C6 A B 533 -55.056 72.242 77.159 1.00 14.15 C
ATOM 19 N6 A B 533 -54.882 73.076 76.125 1.00 14.15 N
ATOM 20 N1 A B 533 -54.192 72.379 78.174 1.00 14.15 N
ATOM 21 C2 A B 533 -54.298 71.578 79.230 1.00 14.15 C
ATOM 22 N3 A B 533 -55.173 70.603 79.442 1.00 14.15 N
ATOM 23 C4 A B 533 -56.036 70.481 78.420 1.00 14.15 C
ATOM 24 P C B 534 -58.746 65.601 82.340 1.00 2.69 P
ATOM 25 OP1 C B 534 -57.485 65.121 82.991 1.00 2.69 O
ATOM 26 OP2 C B 534 -59.496 64.667 81.459 1.00 2.69 O
ATOM 27 O5' C B 534 -59.724 66.232 83.422 1.00 2.69 O
TER
Atoms:
OP1: (-56.379,63.695,77.087)
OP2: (-58.107,63.459,75.201)
C3': (-54.492,66.876,73.103)
C1': (-55.287,68.604,74.517)
C5': (-56.475,65.302,73.613)
O6: (-51.859,69.400,79.386)
O4': (-56.264,67.580,74.458)
C8: (-54.998,67.871,76.954)
C2: (-51.847,70.746,76.117)
C6: (-52.216,69.582,78.219)
C5: (-53.305,68.983,77.538)
C4: (-53.543,69.326,76.226)
P: (-56.683,63.612,75.631)
C4': (-55.989,66.707,73.321)
C2': (-54.283,68.352,73.384)
O2': (-54.658,69.127,72.249)
N1: (-51.523,70.475,77.414)
N2: (-51.052,71.616,75.511)
N3: (-52.851,70.198,75.458)
N7: (-54.227,68.061,77.989)
N9: (-54.641,68.590,75.847)
O5': (-56.009,64.848,74.874)
O3': (-54.070,66.502,71.809)
OP2: (-58.107,63.459,75.201)
C3': (-54.492,66.876,73.103)
C1': (-55.287,68.604,74.517)
C5': (-56.475,65.302,73.613)
O6: (-51.859,69.400,79.386)
O4': (-56.264,67.580,74.458)
C8: (-54.998,67.871,76.954)
C2: (-51.847,70.746,76.117)
C6: (-52.216,69.582,78.219)
C5: (-53.305,68.983,77.538)
C4: (-53.543,69.326,76.226)
P: (-56.683,63.612,75.631)
C4': (-55.989,66.707,73.321)
C2': (-54.283,68.352,73.384)
O2': (-54.658,69.127,72.249)
N1: (-51.523,70.475,77.414)
N2: (-51.052,71.616,75.511)
N3: (-52.851,70.198,75.458)
N7: (-54.227,68.061,77.989)
N9: (-54.641,68.590,75.847)
O5': (-56.009,64.848,74.874)
O3': (-54.070,66.502,71.809)
OP1: (-62.009,65.953,78.870)
OP2: (-62.321,67.860,77.207)
C3': (-59.024,67.139,80.228)
C1': (-57.407,68.559,79.288)
C5': (-59.142,65.877,78.004)
O4': (-57.283,67.314,78.634)
C8: (-57.659,69.824,77.118)
O2': (-58.973,69.528,80.867)
C6: (-55.056,72.242,77.159)
C5: (-56.048,71.240,77.281)
C4: (-56.036,70.481,78.420)
P: (-61.625,66.621,77.594)
C4': (-58.285,66.387,79.142)
C2': (-58.829,68.600,79.815)
C2: (-54.298,71.578,79.230)
N1: (-54.192,72.379,78.174)
N3: (-55.173,70.603,79.442)
N6: (-54.882,73.076,76.125)
N7: (-57.085,70.806,76.469)
N9: (-57.082,69.596,78.321)
O5': (-60.053,66.862,77.542)
O3': (-58.367,66.894,81.466)
OP2: (-62.321,67.860,77.207)
C3': (-59.024,67.139,80.228)
C1': (-57.407,68.559,79.288)
C5': (-59.142,65.877,78.004)
O4': (-57.283,67.314,78.634)
C8: (-57.659,69.824,77.118)
O2': (-58.973,69.528,80.867)
C6: (-55.056,72.242,77.159)
C5: (-56.048,71.240,77.281)
C4: (-56.036,70.481,78.420)
P: (-61.625,66.621,77.594)
C4': (-58.285,66.387,79.142)
C2': (-58.829,68.600,79.815)
C2: (-54.298,71.578,79.230)
N1: (-54.192,72.379,78.174)
N3: (-55.173,70.603,79.442)
N6: (-54.882,73.076,76.125)
N7: (-57.085,70.806,76.469)
N9: (-57.082,69.596,78.321)
O5': (-60.053,66.862,77.542)
O3': (-58.367,66.894,81.466)
Image (generated by PyMOL):