ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FJG:A545:A541

Extra

PDB:
ATOM 1 O3' G A 544 148.715 108.224 -15.968 1.00 37.51 O
ATOM 2 P G A 545 149.358 109.221 -17.042 1.00 48.36 P
ATOM 3 OP1 G A 545 149.296 110.597 -16.500 1.00 38.87 O
ATOM 4 OP2 G A 545 148.804 108.927 -18.395 1.00 38.87 O
ATOM 5 O5' G A 545 150.887 108.801 -17.016 1.00 41.23 O
ATOM 6 C5' G A 545 151.649 108.966 -15.820 1.00 41.23 C
ATOM 7 C4' G A 545 153.078 108.585 -16.060 1.00 41.23 C
ATOM 8 O4' G A 545 153.218 107.143 -16.098 1.00 41.23 O
ATOM 9 C3' G A 545 153.654 109.065 -17.371 1.00 41.23 C
ATOM 10 O3' G A 545 154.055 110.420 -17.266 1.00 41.23 O
ATOM 11 C2' G A 545 154.808 108.092 -17.602 1.00 41.23 C
ATOM 12 O2' G A 545 156.004 108.442 -16.936 1.00 41.23 O
ATOM 13 C1' G A 545 154.272 106.798 -16.978 1.00 41.23 C
ATOM 14 N9 G A 545 153.783 105.839 -17.966 1.00 38.87 N
ATOM 15 C8 G A 545 152.488 105.637 -18.352 1.00 38.87 C
ATOM 16 N7 G A 545 152.367 104.720 -19.272 1.00 38.87 N
ATOM 17 C5 G A 545 153.660 104.289 -19.503 1.00 38.87 C
ATOM 18 C6 G A 545 154.141 103.303 -20.377 1.00 38.87 C
ATOM 19 O6 G A 545 153.502 102.594 -21.153 1.00 38.87 O
ATOM 20 N1 G A 545 155.520 103.167 -20.287 1.00 38.87 N
ATOM 21 C2 G A 545 156.328 103.890 -19.447 1.00 38.87 C
ATOM 22 N2 G A 545 157.630 103.597 -19.475 1.00 38.87 N
ATOM 23 N3 G A 545 155.888 104.825 -18.629 1.00 38.87 N
ATOM 24 C4 G A 545 154.549 104.967 -18.706 1.00 38.87 C
ATOM 25 P G A 546 154.542 111.217 -18.581 1.00 45.42 P
ATOM 26 OP1 G A 546 154.841 112.609 -18.161 1.00 42.49 O
ATOM 27 OP2 G A 546 153.645 110.980 -19.751 1.00 42.49 O
ATOM 28 O5' G A 546 155.930 110.524 -18.907 1.00 45.42 O
TER

ATOM 1 O3' C B 540 150.222 98.378 -14.623 1.00 41.37 O
ATOM 2 P A B 541 149.026 99.223 -13.931 1.00 36.92 P
ATOM 3 OP1 A B 541 149.217 99.341 -12.452 1.00 40.04 O
ATOM 4 OP2 A B 541 147.750 98.660 -14.462 1.00 40.04 O
ATOM 5 O5' A B 541 149.239 100.692 -14.522 1.00 36.92 O
ATOM 6 C5' A B 541 148.428 101.785 -14.078 1.00 36.92 C
ATOM 7 C4' A B 541 148.915 103.085 -14.670 1.00 36.92 C
ATOM 8 O4' A B 541 150.227 103.391 -14.171 1.00 36.92 O
ATOM 9 C3' A B 541 149.069 103.193 -16.181 1.00 36.92 C
ATOM 10 O3' A B 541 147.836 103.602 -16.739 1.00 36.92 O
ATOM 11 C2' A B 541 150.052 104.355 -16.348 1.00 36.92 C
ATOM 12 O2' A B 541 149.425 105.605 -16.543 1.00 36.92 O
ATOM 13 C1' A B 541 150.787 104.374 -15.005 1.00 36.92 C
ATOM 14 N9 A B 541 152.226 104.192 -15.050 1.00 40.04 N
ATOM 15 C8 A B 541 153.125 104.865 -14.271 1.00 40.04 C
ATOM 16 N7 A B 541 154.369 104.527 -14.492 1.00 40.04 N
ATOM 17 C5 A B 541 154.279 103.561 -15.482 1.00 40.04 C
ATOM 18 C6 A B 541 155.246 102.806 -16.132 1.00 40.04 C
ATOM 19 N6 A B 541 156.537 102.910 -15.861 1.00 40.04 N
ATOM 20 N1 A B 541 154.840 101.930 -17.074 1.00 40.04 N
ATOM 21 C2 A B 541 153.534 101.832 -17.325 1.00 40.04 C
ATOM 22 N3 A B 541 152.520 102.488 -16.770 1.00 40.04 N
ATOM 23 C4 A B 541 152.966 103.349 -15.842 1.00 40.04 C
ATOM 24 P C B 542 147.228 102.835 -18.000 1.00 38.77 P
ATOM 25 OP1 C B 542 147.531 101.392 -17.804 1.00 49.30 O
ATOM 26 OP2 C B 542 147.598 103.508 -19.276 1.00 49.30 O
ATOM 27 O5' C B 542 145.671 103.023 -17.760 1.00 38.77 O
TER

Atoms:
OP1: (149.296,110.597,-16.500)
OP2: (148.804,108.927,-18.395)
C3': (153.654,109.065,-17.371)
C1': (154.272,106.798,-16.978)
C5': (151.649,108.966,-15.820)
O6: (153.502,102.594,-21.153)
O4': (153.218,107.143,-16.098)
C8: (152.488,105.637,-18.352)
C2: (156.328,103.890,-19.447)
C6: (154.141,103.303,-20.377)
C5: (153.660,104.289,-19.503)
C4: (154.549,104.967,-18.706)
P: (149.358,109.221,-17.042)
C4': (153.078,108.585,-16.060)
C2': (154.808,108.092,-17.602)
O2': (156.004,108.442,-16.936)
N1: (155.520,103.167,-20.287)
N2: (157.630,103.597,-19.475)
N3: (155.888,104.825,-18.629)
N7: (152.367,104.720,-19.272)
N9: (153.783,105.839,-17.966)
O5': (150.887,108.801,-17.016)
O3': (154.055,110.420,-17.266)
OP1: (149.217,99.341,-12.452)
OP2: (147.750,98.660,-14.462)
C3': (149.069,103.193,-16.181)
C1': (150.787,104.374,-15.005)
C5': (148.428,101.785,-14.078)
O4': (150.227,103.391,-14.171)
C8: (153.125,104.865,-14.271)
O2': (149.425,105.605,-16.543)
C6: (155.246,102.806,-16.132)
C5: (154.279,103.561,-15.482)
C4: (152.966,103.349,-15.842)
P: (149.026,99.223,-13.931)
C4': (148.915,103.085,-14.670)
C2': (150.052,104.355,-16.348)
C2: (153.534,101.832,-17.325)
N1: (154.840,101.930,-17.074)
N3: (152.520,102.488,-16.770)
N6: (156.537,102.910,-15.861)
N7: (154.369,104.527,-14.492)
N9: (152.226,104.192,-15.050)
O5': (149.239,100.692,-14.522)
O3': (147.836,103.602,-16.739)
Image (generated by PyMOL):
PyMOL image
show in jmol