ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZXU:D17:D57

Extra

PDB:
ATOM 1 O3' C A 16 -5.203 11.711 66.203 1.00 84.86 O
ATOM 2 P G A 17 -4.046 10.878 66.926 1.00 84.74 P
ATOM 3 OP1 G A 17 -4.376 9.439 66.783 1.00 84.53 O
ATOM 4 OP2 G A 17 -3.851 11.458 68.280 1.00 85.56 O
ATOM 5 O5' G A 17 -2.754 11.193 66.049 1.00 85.13 O
ATOM 6 C5' G A 17 -2.265 12.527 65.920 1.00 85.00 C
ATOM 7 C4' G A 17 -0.764 12.531 66.003 1.00 85.28 C
ATOM 8 O4' G A 17 -0.393 11.902 67.243 1.00 85.34 O
ATOM 9 C3' G A 17 -0.048 11.754 64.906 1.00 85.65 C
ATOM 10 O3' G A 17 0.268 12.703 63.881 1.00 85.45 O
ATOM 11 C2' G A 17 1.216 11.228 65.595 1.00 85.89 C
ATOM 12 O2' G A 17 2.341 12.069 65.459 1.00 88.13 O
ATOM 13 C1' G A 17 0.820 11.216 67.071 1.00 85.27 C
ATOM 14 N9 G A 17 0.749 9.945 67.786 1.00 84.38 N
ATOM 15 C8 G A 17 -0.321 9.088 67.905 1.00 84.02 C
ATOM 16 N7 G A 17 -0.086 8.091 68.715 1.00 83.64 N
ATOM 17 C5 G A 17 1.223 8.293 69.134 1.00 83.10 C
ATOM 18 C6 G A 17 2.026 7.555 70.035 1.00 82.75 C
ATOM 19 O6 G A 17 1.728 6.546 70.683 1.00 83.07 O
ATOM 20 N1 G A 17 3.297 8.110 70.157 1.00 82.55 N
ATOM 21 C2 G A 17 3.734 9.240 69.501 1.00 82.00 C
ATOM 22 N2 G A 17 4.991 9.630 69.735 1.00 81.53 N
ATOM 23 N3 G A 17 2.991 9.937 68.675 1.00 81.66 N
ATOM 24 C4 G A 17 1.756 9.416 68.540 1.00 83.01 C
ATOM 25 P G A 18 0.559 12.224 62.375 1.00 83.56 P
ATOM 26 OP1 G A 18 0.550 13.445 61.540 1.00 85.34 O
ATOM 27 OP2 G A 18 -0.369 11.112 62.051 1.00 85.04 O
ATOM 28 O5' G A 18 2.055 11.678 62.406 1.00 82.51 O
TER

ATOM 1 O3' G B 56 9.405 10.259 68.688 1.00 71.01 O
ATOM 2 P A B 57 8.871 11.181 69.893 1.00 72.41 P
ATOM 3 OP1 A B 57 9.860 12.276 70.069 1.00 72.69 O
ATOM 4 OP2 A B 57 8.516 10.323 71.054 1.00 73.41 O
ATOM 5 O5' A B 57 7.528 11.805 69.316 1.00 71.80 O
ATOM 6 C5' A B 57 7.530 12.500 68.078 1.00 73.24 C
ATOM 7 C4' A B 57 6.537 13.629 68.122 1.00 74.48 C
ATOM 8 O4' A B 57 5.213 13.084 68.304 1.00 73.50 O
ATOM 9 C3' A B 57 6.743 14.620 69.257 1.00 75.83 C
ATOM 10 O3' A B 57 7.636 15.633 68.770 1.00 78.68 O
ATOM 11 C2' A B 57 5.328 15.133 69.534 1.00 74.94 C
ATOM 12 O2' A B 57 4.983 16.244 68.729 1.00 75.73 O
ATOM 13 C1' A B 57 4.463 13.924 69.151 1.00 73.32 C
ATOM 14 N9 A B 57 3.949 13.090 70.234 1.00 72.30 N
ATOM 15 C8 A B 57 4.645 12.449 71.229 1.00 72.48 C
ATOM 16 N7 A B 57 3.892 11.702 72.001 1.00 71.04 N
ATOM 17 C5 A B 57 2.615 11.877 71.489 1.00 70.97 C
ATOM 18 C6 A B 57 1.367 11.343 71.856 1.00 70.76 C
ATOM 19 N6 A B 57 1.199 10.481 72.859 1.00 70.96 N
ATOM 20 N1 A B 57 0.285 11.726 71.144 1.00 69.85 N
ATOM 21 C2 A B 57 0.456 12.582 70.133 1.00 70.11 C
ATOM 22 N3 A B 57 1.577 13.146 69.685 1.00 71.02 N
ATOM 23 C4 A B 57 2.632 12.746 70.414 1.00 71.40 C
ATOM 24 P U B 58 8.021 16.897 69.687 1.00 79.20 P
ATOM 25 OP1 U B 58 9.314 17.407 69.161 1.00 78.84 O
ATOM 26 OP2 U B 58 7.913 16.507 71.118 1.00 79.77 O
ATOM 27 O5' U B 58 6.882 17.964 69.354 1.00 77.85 O
TER

Atoms:
OP1: (-4.376,9.439,66.783)
OP2: (-3.851,11.458,68.280)
C3': (-0.048,11.754,64.906)
C1': (0.820,11.216,67.071)
C5': (-2.265,12.527,65.920)
O6: (1.728,6.546,70.683)
O4': (-0.393,11.902,67.243)
C8: (-0.321,9.088,67.905)
C2: (3.734,9.240,69.501)
C6: (2.026,7.555,70.035)
C5: (1.223,8.293,69.134)
C4: (1.756,9.416,68.540)
P: (-4.046,10.878,66.926)
C4': (-0.764,12.531,66.003)
C2': (1.216,11.228,65.595)
O2': (2.341,12.069,65.459)
N1: (3.297,8.110,70.157)
N2: (4.991,9.630,69.735)
N3: (2.991,9.937,68.675)
N7: (-0.086,8.091,68.715)
N9: (0.749,9.945,67.786)
O5': (-2.754,11.193,66.049)
O3': (0.268,12.703,63.881)
OP1: (9.860,12.276,70.069)
OP2: (8.516,10.323,71.054)
C3': (6.743,14.620,69.257)
C1': (4.463,13.924,69.151)
C5': (7.530,12.500,68.078)
O4': (5.213,13.084,68.304)
C8: (4.645,12.449,71.229)
O2': (4.983,16.244,68.729)
C6: (1.367,11.343,71.856)
C5: (2.615,11.877,71.489)
C4: (2.632,12.746,70.414)
P: (8.871,11.181,69.893)
C4': (6.537,13.629,68.122)
C2': (5.328,15.133,69.534)
C2: (0.456,12.582,70.133)
N1: (0.285,11.726,71.144)
N3: (1.577,13.146,69.685)
N6: (1.199,10.481,72.859)
N7: (3.892,11.702,72.001)
N9: (3.949,13.090,70.234)
O5': (7.528,11.805,69.316)
O3': (7.636,15.633,68.770)
Image (generated by PyMOL):
PyMOL image
show in jmol