Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11974:11494
Extra
PDB:
ATOM 1 O3' A A1973 24.366 -19.945 114.881 1.00 45.53 O
ATOM 2 P A A1974 22.973 -19.780 115.672 1.00 45.34 P
ATOM 3 OP1 A A1974 22.141 -20.946 115.261 1.00 45.32 O
ATOM 4 OP2 A A1974 22.467 -18.417 115.411 1.00 45.24 O
ATOM 5 O5' A A1974 23.394 -19.938 117.195 1.00 45.79 O
ATOM 6 C5' A A1974 23.811 -21.210 117.672 1.00 45.99 C
ATOM 7 C4' A A1974 24.495 -21.108 118.992 1.00 46.37 C
ATOM 8 O4' A A1974 25.580 -20.173 118.893 1.00 46.25 O
ATOM 9 C3' A A1974 23.631 -20.610 120.129 1.00 46.75 C
ATOM 10 O3' A A1974 23.022 -21.690 120.783 1.00 47.05 O
ATOM 11 C2' A A1974 24.599 -19.863 121.021 1.00 46.97 C
ATOM 12 O2' A A1974 25.217 -20.767 121.907 1.00 47.29 O
ATOM 13 C1' A A1974 25.657 -19.383 120.041 1.00 46.59 C
ATOM 14 N9 A A1974 25.491 -17.996 119.623 1.00 46.41 N
ATOM 15 C8 A A1974 24.846 -17.650 118.482 1.00 46.05 C
ATOM 16 N7 A A1974 24.901 -16.365 118.251 1.00 45.94 N
ATOM 17 C5 A A1974 25.663 -15.847 119.278 1.00 46.23 C
ATOM 18 C6 A A1974 26.067 -14.540 119.567 1.00 46.29 C
ATOM 19 N6 A A1974 25.759 -13.483 118.847 1.00 46.05 N
ATOM 20 N1 A A1974 26.830 -14.363 120.645 1.00 46.62 N
ATOM 21 C2 A A1974 27.132 -15.460 121.375 1.00 46.87 C
ATOM 22 N3 A A1974 26.818 -16.741 121.210 1.00 46.85 N
ATOM 23 C4 A A1974 26.064 -16.863 120.125 1.00 46.52 C
ATOM 24 P A A1975 21.614 -21.552 121.508 1.00 57.85 P
ATOM 25 OP1 A A1975 21.226 -22.935 121.928 1.00 58.09 O
ATOM 26 OP2 A A1975 20.716 -20.797 120.610 1.00 57.56 O
ATOM 27 O5' A A1975 21.964 -20.681 122.776 1.00 58.21 O
TER
ATOM 1 O3' U B1493 34.286 -8.867 120.281 1.00 52.04 O
ATOM 2 P C B1494 33.137 -7.863 120.794 1.00 51.43 P
ATOM 3 OP1 C B1494 32.912 -6.845 119.710 1.00 51.09 O
ATOM 4 OP2 C B1494 33.510 -7.402 122.157 1.00 51.92 O
ATOM 5 O5' C B1494 31.893 -8.819 120.885 1.00 51.44 O
ATOM 6 C5' C B1494 31.334 -9.356 119.714 1.00 51.04 C
ATOM 7 C4' C B1494 30.228 -10.275 120.056 1.00 51.16 C
ATOM 8 O4' C B1494 30.775 -11.433 120.725 1.00 51.36 O
ATOM 9 C3' C B1494 29.215 -9.736 121.046 1.00 51.52 C
ATOM 10 O3' C B1494 28.273 -8.868 120.460 1.00 51.36 O
ATOM 11 C2' C B1494 28.612 -11.015 121.592 1.00 51.70 C
ATOM 12 O2' C B1494 27.748 -11.606 120.626 1.00 51.39 O
ATOM 13 C1' C B1494 29.855 -11.887 121.696 1.00 51.71 C
ATOM 14 N1 C B1494 30.488 -11.820 123.005 1.00 52.16 N
ATOM 15 C2 C B1494 29.912 -12.557 124.002 1.00 52.52 C
ATOM 16 O2 C B1494 28.890 -13.146 123.701 1.00 52.43 O
ATOM 17 N3 C B1494 30.463 -12.603 125.231 1.00 52.96 N
ATOM 18 C4 C B1494 31.587 -11.919 125.429 1.00 53.02 C
ATOM 19 N4 C B1494 32.134 -11.951 126.639 1.00 53.47 N
ATOM 20 C5 C B1494 32.221 -11.163 124.402 1.00 52.65 C
ATOM 21 C6 C B1494 31.643 -11.150 123.206 1.00 52.22 C
ATOM 22 P C B1495 27.458 -7.828 121.372 1.00 52.42 P
ATOM 23 OP1 C B1495 26.456 -7.158 120.501 1.00 52.18 O
ATOM 24 OP2 C B1495 28.456 -6.998 122.078 1.00 52.67 O
ATOM 25 O5' C B1495 26.697 -8.773 122.413 1.00 52.78 O
TER
ATOM 2 P A A1974 22.973 -19.780 115.672 1.00 45.34 P
ATOM 3 OP1 A A1974 22.141 -20.946 115.261 1.00 45.32 O
ATOM 4 OP2 A A1974 22.467 -18.417 115.411 1.00 45.24 O
ATOM 5 O5' A A1974 23.394 -19.938 117.195 1.00 45.79 O
ATOM 6 C5' A A1974 23.811 -21.210 117.672 1.00 45.99 C
ATOM 7 C4' A A1974 24.495 -21.108 118.992 1.00 46.37 C
ATOM 8 O4' A A1974 25.580 -20.173 118.893 1.00 46.25 O
ATOM 9 C3' A A1974 23.631 -20.610 120.129 1.00 46.75 C
ATOM 10 O3' A A1974 23.022 -21.690 120.783 1.00 47.05 O
ATOM 11 C2' A A1974 24.599 -19.863 121.021 1.00 46.97 C
ATOM 12 O2' A A1974 25.217 -20.767 121.907 1.00 47.29 O
ATOM 13 C1' A A1974 25.657 -19.383 120.041 1.00 46.59 C
ATOM 14 N9 A A1974 25.491 -17.996 119.623 1.00 46.41 N
ATOM 15 C8 A A1974 24.846 -17.650 118.482 1.00 46.05 C
ATOM 16 N7 A A1974 24.901 -16.365 118.251 1.00 45.94 N
ATOM 17 C5 A A1974 25.663 -15.847 119.278 1.00 46.23 C
ATOM 18 C6 A A1974 26.067 -14.540 119.567 1.00 46.29 C
ATOM 19 N6 A A1974 25.759 -13.483 118.847 1.00 46.05 N
ATOM 20 N1 A A1974 26.830 -14.363 120.645 1.00 46.62 N
ATOM 21 C2 A A1974 27.132 -15.460 121.375 1.00 46.87 C
ATOM 22 N3 A A1974 26.818 -16.741 121.210 1.00 46.85 N
ATOM 23 C4 A A1974 26.064 -16.863 120.125 1.00 46.52 C
ATOM 24 P A A1975 21.614 -21.552 121.508 1.00 57.85 P
ATOM 25 OP1 A A1975 21.226 -22.935 121.928 1.00 58.09 O
ATOM 26 OP2 A A1975 20.716 -20.797 120.610 1.00 57.56 O
ATOM 27 O5' A A1975 21.964 -20.681 122.776 1.00 58.21 O
TER
ATOM 1 O3' U B1493 34.286 -8.867 120.281 1.00 52.04 O
ATOM 2 P C B1494 33.137 -7.863 120.794 1.00 51.43 P
ATOM 3 OP1 C B1494 32.912 -6.845 119.710 1.00 51.09 O
ATOM 4 OP2 C B1494 33.510 -7.402 122.157 1.00 51.92 O
ATOM 5 O5' C B1494 31.893 -8.819 120.885 1.00 51.44 O
ATOM 6 C5' C B1494 31.334 -9.356 119.714 1.00 51.04 C
ATOM 7 C4' C B1494 30.228 -10.275 120.056 1.00 51.16 C
ATOM 8 O4' C B1494 30.775 -11.433 120.725 1.00 51.36 O
ATOM 9 C3' C B1494 29.215 -9.736 121.046 1.00 51.52 C
ATOM 10 O3' C B1494 28.273 -8.868 120.460 1.00 51.36 O
ATOM 11 C2' C B1494 28.612 -11.015 121.592 1.00 51.70 C
ATOM 12 O2' C B1494 27.748 -11.606 120.626 1.00 51.39 O
ATOM 13 C1' C B1494 29.855 -11.887 121.696 1.00 51.71 C
ATOM 14 N1 C B1494 30.488 -11.820 123.005 1.00 52.16 N
ATOM 15 C2 C B1494 29.912 -12.557 124.002 1.00 52.52 C
ATOM 16 O2 C B1494 28.890 -13.146 123.701 1.00 52.43 O
ATOM 17 N3 C B1494 30.463 -12.603 125.231 1.00 52.96 N
ATOM 18 C4 C B1494 31.587 -11.919 125.429 1.00 53.02 C
ATOM 19 N4 C B1494 32.134 -11.951 126.639 1.00 53.47 N
ATOM 20 C5 C B1494 32.221 -11.163 124.402 1.00 52.65 C
ATOM 21 C6 C B1494 31.643 -11.150 123.206 1.00 52.22 C
ATOM 22 P C B1495 27.458 -7.828 121.372 1.00 52.42 P
ATOM 23 OP1 C B1495 26.456 -7.158 120.501 1.00 52.18 O
ATOM 24 OP2 C B1495 28.456 -6.998 122.078 1.00 52.67 O
ATOM 25 O5' C B1495 26.697 -8.773 122.413 1.00 52.78 O
TER
Atoms:
OP1: (22.141,-20.946,115.261)
OP2: (22.467,-18.417,115.411)
C3': (23.631,-20.610,120.129)
C1': (25.657,-19.383,120.041)
C5': (23.811,-21.210,117.672)
O4': (25.580,-20.173,118.893)
C8: (24.846,-17.650,118.482)
O2': (25.217,-20.767,121.907)
C6: (26.067,-14.540,119.567)
C5: (25.663,-15.847,119.278)
C4: (26.064,-16.863,120.125)
P: (22.973,-19.780,115.672)
C4': (24.495,-21.108,118.992)
C2': (24.599,-19.863,121.021)
C2: (27.132,-15.460,121.375)
N1: (26.830,-14.363,120.645)
N3: (26.818,-16.741,121.210)
N6: (25.759,-13.483,118.847)
N7: (24.901,-16.365,118.251)
N9: (25.491,-17.996,119.623)
O5': (23.394,-19.938,117.195)
O3': (23.022,-21.690,120.783)
OP2: (22.467,-18.417,115.411)
C3': (23.631,-20.610,120.129)
C1': (25.657,-19.383,120.041)
C5': (23.811,-21.210,117.672)
O4': (25.580,-20.173,118.893)
C8: (24.846,-17.650,118.482)
O2': (25.217,-20.767,121.907)
C6: (26.067,-14.540,119.567)
C5: (25.663,-15.847,119.278)
C4: (26.064,-16.863,120.125)
P: (22.973,-19.780,115.672)
C4': (24.495,-21.108,118.992)
C2': (24.599,-19.863,121.021)
C2: (27.132,-15.460,121.375)
N1: (26.830,-14.363,120.645)
N3: (26.818,-16.741,121.210)
N6: (25.759,-13.483,118.847)
N7: (24.901,-16.365,118.251)
N9: (25.491,-17.996,119.623)
O5': (23.394,-19.938,117.195)
O3': (23.022,-21.690,120.783)
C2: (29.912,-12.557,124.002)
OP1: (32.912,-6.845,119.710)
OP2: (33.510,-7.402,122.157)
C4: (31.587,-11.919,125.429)
O5': (31.893,-8.819,120.885)
C3': (29.215,-9.736,121.046)
C1': (29.855,-11.887,121.696)
O4': (30.775,-11.433,120.725)
C5': (31.334,-9.356,119.714)
P: (33.137,-7.863,120.794)
O2: (28.890,-13.146,123.701)
C4': (30.228,-10.275,120.056)
C2': (28.612,-11.015,121.592)
O2': (27.748,-11.606,120.626)
N1: (30.488,-11.820,123.005)
N3: (30.463,-12.603,125.231)
N4: (32.134,-11.951,126.639)
C6: (31.643,-11.150,123.206)
C5: (32.221,-11.163,124.402)
O3': (28.273,-8.868,120.460)
OP1: (32.912,-6.845,119.710)
OP2: (33.510,-7.402,122.157)
C4: (31.587,-11.919,125.429)
O5': (31.893,-8.819,120.885)
C3': (29.215,-9.736,121.046)
C1': (29.855,-11.887,121.696)
O4': (30.775,-11.433,120.725)
C5': (31.334,-9.356,119.714)
P: (33.137,-7.863,120.794)
O2: (28.890,-13.146,123.701)
C4': (30.228,-10.275,120.056)
C2': (28.612,-11.015,121.592)
O2': (27.748,-11.606,120.626)
N1: (30.488,-11.820,123.005)
N3: (30.463,-12.603,125.231)
N4: (32.134,-11.951,126.639)
C6: (31.643,-11.150,123.206)
C5: (32.221,-11.163,124.402)
O3': (28.273,-8.868,120.460)
Image (generated by PyMOL):