ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11118:11262

Extra

PDB:
ATOM 1 O3' U A1117 59.108 6.768 17.457 1.00 35.89 O
ATOM 2 P G A1118 57.875 7.230 16.509 1.00 38.21 P
ATOM 3 OP1 G A1118 56.625 6.962 17.321 1.00 37.92 O
ATOM 4 OP2 G A1118 58.059 6.572 15.195 1.00 38.55 O
ATOM 5 O5' G A1118 58.092 8.801 16.329 1.00 38.39 O
ATOM 6 C5' G A1118 58.527 9.345 15.084 1.00 38.83 C
ATOM 7 C4' G A1118 58.313 10.828 15.043 1.00 38.97 C
ATOM 8 O4' G A1118 56.906 11.096 14.892 1.00 39.01 O
ATOM 9 C3' G A1118 58.744 11.574 16.294 1.00 38.69 C
ATOM 10 O3' G A1118 60.050 12.062 16.158 1.00 38.82 O
ATOM 11 C2' G A1118 57.703 12.687 16.452 1.00 38.74 C
ATOM 12 O2' G A1118 58.106 13.873 15.783 1.00 39.08 O
ATOM 13 C1' G A1118 56.491 12.120 15.734 1.00 38.86 C
ATOM 14 N9 G A1118 55.490 11.560 16.638 1.00 38.52 N
ATOM 15 C8 G A1118 55.067 10.262 16.531 1.00 38.41 C
ATOM 16 N7 G A1118 54.095 9.966 17.334 1.00 38.13 N
ATOM 17 C5 G A1118 53.872 11.168 17.991 1.00 38.06 C
ATOM 18 C6 G A1118 52.934 11.451 18.992 1.00 37.81 C
ATOM 19 O6 G A1118 52.148 10.632 19.466 1.00 37.58 O
ATOM 20 N1 G A1118 53.008 12.781 19.435 1.00 37.83 N
ATOM 21 C2 G A1118 53.881 13.712 18.942 1.00 38.08 C
ATOM 22 N2 G A1118 53.789 14.928 19.462 1.00 38.09 N
ATOM 23 N3 G A1118 54.759 13.464 17.989 1.00 38.33 N
ATOM 24 C4 G A1118 54.709 12.175 17.576 1.00 38.30 C
ATOM 25 P C A1119 61.095 12.049 17.362 1.00 36.50 P
ATOM 26 OP1 C A1119 62.255 12.740 16.859 1.00 36.77 O
ATOM 27 OP2 C A1119 61.249 10.653 17.818 1.00 36.24 O
ATOM 28 O5' C A1119 60.392 12.946 18.464 1.00 36.27 O
TER

ATOM 1 O3' A B1261 50.905 9.303 10.230 1.00 46.53 O
ATOM 2 P A B1262 52.501 9.406 10.144 1.00 40.04 P
ATOM 3 OP1 A B1262 52.824 10.828 9.788 1.00 40.30 O
ATOM 4 OP2 A B1262 52.960 8.291 9.230 1.00 40.25 O
ATOM 5 O5' A B1262 52.959 9.112 11.653 1.00 39.52 O
ATOM 6 C5' A B1262 52.838 7.809 12.223 1.00 39.22 C
ATOM 7 C4' A B1262 51.983 7.809 13.473 1.00 38.82 C
ATOM 8 O4' A B1262 52.418 8.882 14.345 1.00 38.64 O
ATOM 9 C3' A B1262 50.492 8.043 13.253 1.00 38.92 C
ATOM 10 O3' A B1262 49.748 7.422 14.326 1.00 38.53 O
ATOM 11 C2' A B1262 50.408 9.561 13.382 1.00 39.01 C
ATOM 12 O2' A B1262 49.116 10.070 13.619 1.00 39.00 O
ATOM 13 C1' A B1262 51.366 9.803 14.548 1.00 38.66 C
ATOM 14 N9 A B1262 51.957 11.139 14.580 1.00 38.78 N
ATOM 15 C8 A B1262 52.947 11.583 13.733 1.00 39.09 C
ATOM 16 N7 A B1262 53.344 12.813 13.942 1.00 39.16 N
ATOM 17 C5 A B1262 52.578 13.189 15.014 1.00 38.88 C
ATOM 18 C6 A B1262 52.542 14.398 15.698 1.00 38.82 C
ATOM 19 N6 A B1262 53.321 15.415 15.364 1.00 39.05 N
ATOM 20 N1 A B1262 51.639 14.508 16.717 1.00 38.53 N
ATOM 21 C2 A B1262 50.866 13.431 17.025 1.00 38.31 C
ATOM 22 N3 A B1262 50.854 12.221 16.441 1.00 38.34 N
ATOM 23 C4 A B1262 51.737 12.166 15.436 1.00 38.63 C
ATOM 24 P G B1263 49.299 5.874 14.229 1.00 41.84 P
ATOM 25 OP1 G B1263 49.547 5.252 15.542 1.00 41.39 O
ATOM 26 OP2 G B1263 49.950 5.301 13.036 1.00 42.17 O
ATOM 27 O5' G B1263 47.749 5.993 13.969 1.00 41.96 O
TER

Atoms:
OP1: (56.625,6.962,17.321)
OP2: (58.059,6.572,15.195)
C3': (58.744,11.574,16.294)
C1': (56.491,12.120,15.734)
C5': (58.527,9.345,15.084)
O6: (52.148,10.632,19.466)
O4': (56.906,11.096,14.892)
C8: (55.067,10.262,16.531)
C2: (53.881,13.712,18.942)
C6: (52.934,11.451,18.992)
C5: (53.872,11.168,17.991)
C4: (54.709,12.175,17.576)
P: (57.875,7.230,16.509)
C4': (58.313,10.828,15.043)
C2': (57.703,12.687,16.452)
O2': (58.106,13.873,15.783)
N1: (53.008,12.781,19.435)
N2: (53.789,14.928,19.462)
N3: (54.759,13.464,17.989)
N7: (54.095,9.966,17.334)
N9: (55.490,11.560,16.638)
O5': (58.092,8.801,16.329)
O3': (60.050,12.062,16.158)
OP1: (52.824,10.828,9.788)
OP2: (52.960,8.291,9.230)
C3': (50.492,8.043,13.253)
C1': (51.366,9.803,14.548)
C5': (52.838,7.809,12.223)
O4': (52.418,8.882,14.345)
C8: (52.947,11.583,13.733)
O2': (49.116,10.070,13.619)
C6: (52.542,14.398,15.698)
C5: (52.578,13.189,15.014)
C4: (51.737,12.166,15.436)
P: (52.501,9.406,10.144)
C4': (51.983,7.809,13.473)
C2': (50.408,9.561,13.382)
C2: (50.866,13.431,17.025)
N1: (51.639,14.508,16.717)
N3: (50.854,12.221,16.441)
N6: (53.321,15.415,15.364)
N7: (53.344,12.813,13.942)
N9: (51.957,11.139,14.580)
O5': (52.959,9.112,11.653)
O3': (49.748,7.422,14.326)
Image (generated by PyMOL):
PyMOL image
show in jmol