Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02378:02047
Extra
PDB:
ATOM 1 O3' C A2377 60.689 118.457 90.304 1.00 38.53 O
ATOM 2 P G A2378 59.716 118.825 89.086 1.00 39.63 P
ATOM 3 OP1 G A2378 58.611 117.839 89.086 1.00 42.38 O
ATOM 4 OP2 G A2378 60.518 119.027 87.853 1.00 39.19 O
ATOM 5 O5' G A2378 59.109 120.224 89.513 1.00 39.38 O
ATOM 6 C5' G A2378 59.508 121.431 88.860 1.00 42.02 C
ATOM 7 C4' G A2378 58.295 122.123 88.307 1.00 44.49 C
ATOM 8 O4' G A2378 57.758 121.339 87.226 1.00 45.06 O
ATOM 9 C3' G A2378 57.130 122.202 89.275 1.00 44.56 C
ATOM 10 O3' G A2378 57.330 123.350 90.095 1.00 47.43 O
ATOM 11 C2' G A2378 55.936 122.387 88.342 1.00 43.22 C
ATOM 12 O2' G A2378 55.762 123.736 87.997 1.00 44.52 O
ATOM 13 C1' G A2378 56.403 121.666 87.072 1.00 43.50 C
ATOM 14 N9 G A2378 55.679 120.478 86.635 1.00 42.66 N
ATOM 15 C8 G A2378 55.730 119.216 87.170 1.00 41.80 C
ATOM 16 N7 G A2378 54.994 118.357 86.520 1.00 41.58 N
ATOM 17 C5 G A2378 54.416 119.102 85.502 1.00 41.64 C
ATOM 18 C6 G A2378 53.527 118.712 84.473 1.00 41.49 C
ATOM 19 O6 G A2378 53.041 117.599 84.263 1.00 43.72 O
ATOM 20 N1 G A2378 53.206 119.780 83.641 1.00 41.00 N
ATOM 21 C2 G A2378 53.672 121.064 83.790 1.00 41.63 C
ATOM 22 N2 G A2378 53.259 121.963 82.884 1.00 40.14 N
ATOM 23 N3 G A2378 54.489 121.441 84.755 1.00 41.86 N
ATOM 24 C4 G A2378 54.823 120.413 85.565 1.00 41.94 C
ATOM 25 P A A2379 57.013 123.295 91.667 1.00 49.48 P
ATOM 26 OP1 A A2379 55.622 122.807 91.844 1.00 51.04 O
ATOM 27 OP2 A A2379 57.408 124.617 92.214 1.00 49.25 O
ATOM 28 O5' A A2379 57.988 122.185 92.257 1.00 49.90 O
TER
ATOM 1 O3' A B2046 60.257 128.091 84.908 1.00 52.84 O
ATOM 2 P A B2047 58.837 127.540 84.384 1.00 47.40 P
ATOM 3 OP1 A B2047 58.931 127.613 82.907 1.00 50.12 O
ATOM 4 OP2 A B2047 57.721 128.225 85.071 1.00 48.98 O
ATOM 5 O5' A B2047 58.811 126.012 84.837 1.00 46.40 O
ATOM 6 C5' A B2047 59.713 125.049 84.257 1.00 45.16 C
ATOM 7 C4' A B2047 59.652 123.731 85.006 1.00 43.71 C
ATOM 8 O4' A B2047 58.383 123.055 84.727 1.00 41.80 O
ATOM 9 C3' A B2047 60.744 122.741 84.597 1.00 43.16 C
ATOM 10 O3' A B2047 61.205 121.972 85.713 1.00 45.02 O
ATOM 11 C2' A B2047 60.017 121.845 83.611 1.00 42.77 C
ATOM 12 O2' A B2047 60.593 120.569 83.425 1.00 43.57 O
ATOM 13 C1' A B2047 58.650 121.743 84.273 1.00 42.02 C
ATOM 14 N9 A B2047 57.641 121.310 83.308 1.00 41.37 N
ATOM 15 C8 A B2047 57.064 122.006 82.271 1.00 43.04 C
ATOM 16 N7 A B2047 56.301 121.265 81.499 1.00 42.31 N
ATOM 17 C5 A B2047 56.357 120.006 82.084 1.00 41.44 C
ATOM 18 C6 A B2047 55.791 118.768 81.729 1.00 41.00 C
ATOM 19 N6 A B2047 55.044 118.579 80.644 1.00 40.65 N
ATOM 20 N1 A B2047 56.035 117.711 82.533 1.00 40.43 N
ATOM 21 C2 A B2047 56.801 117.892 83.611 1.00 40.77 C
ATOM 22 N3 A B2047 57.400 118.999 84.044 1.00 41.57 N
ATOM 23 C4 A B2047 57.142 120.032 83.223 1.00 41.52 C
ATOM 24 P G B2048 62.784 121.744 85.917 1.00 45.87 P
ATOM 25 OP1 G B2048 63.428 123.074 86.041 1.00 49.00 O
ATOM 26 OP2 G B2048 63.263 120.802 84.888 1.00 47.43 O
ATOM 27 O5' G B2048 62.907 121.007 87.319 1.00 49.82 O
TER
ATOM 2 P G A2378 59.716 118.825 89.086 1.00 39.63 P
ATOM 3 OP1 G A2378 58.611 117.839 89.086 1.00 42.38 O
ATOM 4 OP2 G A2378 60.518 119.027 87.853 1.00 39.19 O
ATOM 5 O5' G A2378 59.109 120.224 89.513 1.00 39.38 O
ATOM 6 C5' G A2378 59.508 121.431 88.860 1.00 42.02 C
ATOM 7 C4' G A2378 58.295 122.123 88.307 1.00 44.49 C
ATOM 8 O4' G A2378 57.758 121.339 87.226 1.00 45.06 O
ATOM 9 C3' G A2378 57.130 122.202 89.275 1.00 44.56 C
ATOM 10 O3' G A2378 57.330 123.350 90.095 1.00 47.43 O
ATOM 11 C2' G A2378 55.936 122.387 88.342 1.00 43.22 C
ATOM 12 O2' G A2378 55.762 123.736 87.997 1.00 44.52 O
ATOM 13 C1' G A2378 56.403 121.666 87.072 1.00 43.50 C
ATOM 14 N9 G A2378 55.679 120.478 86.635 1.00 42.66 N
ATOM 15 C8 G A2378 55.730 119.216 87.170 1.00 41.80 C
ATOM 16 N7 G A2378 54.994 118.357 86.520 1.00 41.58 N
ATOM 17 C5 G A2378 54.416 119.102 85.502 1.00 41.64 C
ATOM 18 C6 G A2378 53.527 118.712 84.473 1.00 41.49 C
ATOM 19 O6 G A2378 53.041 117.599 84.263 1.00 43.72 O
ATOM 20 N1 G A2378 53.206 119.780 83.641 1.00 41.00 N
ATOM 21 C2 G A2378 53.672 121.064 83.790 1.00 41.63 C
ATOM 22 N2 G A2378 53.259 121.963 82.884 1.00 40.14 N
ATOM 23 N3 G A2378 54.489 121.441 84.755 1.00 41.86 N
ATOM 24 C4 G A2378 54.823 120.413 85.565 1.00 41.94 C
ATOM 25 P A A2379 57.013 123.295 91.667 1.00 49.48 P
ATOM 26 OP1 A A2379 55.622 122.807 91.844 1.00 51.04 O
ATOM 27 OP2 A A2379 57.408 124.617 92.214 1.00 49.25 O
ATOM 28 O5' A A2379 57.988 122.185 92.257 1.00 49.90 O
TER
ATOM 1 O3' A B2046 60.257 128.091 84.908 1.00 52.84 O
ATOM 2 P A B2047 58.837 127.540 84.384 1.00 47.40 P
ATOM 3 OP1 A B2047 58.931 127.613 82.907 1.00 50.12 O
ATOM 4 OP2 A B2047 57.721 128.225 85.071 1.00 48.98 O
ATOM 5 O5' A B2047 58.811 126.012 84.837 1.00 46.40 O
ATOM 6 C5' A B2047 59.713 125.049 84.257 1.00 45.16 C
ATOM 7 C4' A B2047 59.652 123.731 85.006 1.00 43.71 C
ATOM 8 O4' A B2047 58.383 123.055 84.727 1.00 41.80 O
ATOM 9 C3' A B2047 60.744 122.741 84.597 1.00 43.16 C
ATOM 10 O3' A B2047 61.205 121.972 85.713 1.00 45.02 O
ATOM 11 C2' A B2047 60.017 121.845 83.611 1.00 42.77 C
ATOM 12 O2' A B2047 60.593 120.569 83.425 1.00 43.57 O
ATOM 13 C1' A B2047 58.650 121.743 84.273 1.00 42.02 C
ATOM 14 N9 A B2047 57.641 121.310 83.308 1.00 41.37 N
ATOM 15 C8 A B2047 57.064 122.006 82.271 1.00 43.04 C
ATOM 16 N7 A B2047 56.301 121.265 81.499 1.00 42.31 N
ATOM 17 C5 A B2047 56.357 120.006 82.084 1.00 41.44 C
ATOM 18 C6 A B2047 55.791 118.768 81.729 1.00 41.00 C
ATOM 19 N6 A B2047 55.044 118.579 80.644 1.00 40.65 N
ATOM 20 N1 A B2047 56.035 117.711 82.533 1.00 40.43 N
ATOM 21 C2 A B2047 56.801 117.892 83.611 1.00 40.77 C
ATOM 22 N3 A B2047 57.400 118.999 84.044 1.00 41.57 N
ATOM 23 C4 A B2047 57.142 120.032 83.223 1.00 41.52 C
ATOM 24 P G B2048 62.784 121.744 85.917 1.00 45.87 P
ATOM 25 OP1 G B2048 63.428 123.074 86.041 1.00 49.00 O
ATOM 26 OP2 G B2048 63.263 120.802 84.888 1.00 47.43 O
ATOM 27 O5' G B2048 62.907 121.007 87.319 1.00 49.82 O
TER
Atoms:
OP1: (58.611,117.839,89.086)
OP2: (60.518,119.027,87.853)
C3': (57.130,122.202,89.275)
C1': (56.403,121.666,87.072)
C5': (59.508,121.431,88.860)
O6: (53.041,117.599,84.263)
O4': (57.758,121.339,87.226)
C8: (55.730,119.216,87.170)
C2: (53.672,121.064,83.790)
C6: (53.527,118.712,84.473)
C5: (54.416,119.102,85.502)
C4: (54.823,120.413,85.565)
P: (59.716,118.825,89.086)
C4': (58.295,122.123,88.307)
C2': (55.936,122.387,88.342)
O2': (55.762,123.736,87.997)
N1: (53.206,119.780,83.641)
N2: (53.259,121.963,82.884)
N3: (54.489,121.441,84.755)
N7: (54.994,118.357,86.520)
N9: (55.679,120.478,86.635)
O5': (59.109,120.224,89.513)
O3': (57.330,123.350,90.095)
OP2: (60.518,119.027,87.853)
C3': (57.130,122.202,89.275)
C1': (56.403,121.666,87.072)
C5': (59.508,121.431,88.860)
O6: (53.041,117.599,84.263)
O4': (57.758,121.339,87.226)
C8: (55.730,119.216,87.170)
C2: (53.672,121.064,83.790)
C6: (53.527,118.712,84.473)
C5: (54.416,119.102,85.502)
C4: (54.823,120.413,85.565)
P: (59.716,118.825,89.086)
C4': (58.295,122.123,88.307)
C2': (55.936,122.387,88.342)
O2': (55.762,123.736,87.997)
N1: (53.206,119.780,83.641)
N2: (53.259,121.963,82.884)
N3: (54.489,121.441,84.755)
N7: (54.994,118.357,86.520)
N9: (55.679,120.478,86.635)
O5': (59.109,120.224,89.513)
O3': (57.330,123.350,90.095)
OP1: (58.931,127.613,82.907)
OP2: (57.721,128.225,85.071)
C3': (60.744,122.741,84.597)
C1': (58.650,121.743,84.273)
C5': (59.713,125.049,84.257)
O4': (58.383,123.055,84.727)
C8: (57.064,122.006,82.271)
O2': (60.593,120.569,83.425)
C6: (55.791,118.768,81.729)
C5: (56.357,120.006,82.084)
C4: (57.142,120.032,83.223)
P: (58.837,127.540,84.384)
C4': (59.652,123.731,85.006)
C2': (60.017,121.845,83.611)
C2: (56.801,117.892,83.611)
N1: (56.035,117.711,82.533)
N3: (57.400,118.999,84.044)
N6: (55.044,118.579,80.644)
N7: (56.301,121.265,81.499)
N9: (57.641,121.310,83.308)
O5': (58.811,126.012,84.837)
O3': (61.205,121.972,85.713)
OP2: (57.721,128.225,85.071)
C3': (60.744,122.741,84.597)
C1': (58.650,121.743,84.273)
C5': (59.713,125.049,84.257)
O4': (58.383,123.055,84.727)
C8: (57.064,122.006,82.271)
O2': (60.593,120.569,83.425)
C6: (55.791,118.768,81.729)
C5: (56.357,120.006,82.084)
C4: (57.142,120.032,83.223)
P: (58.837,127.540,84.384)
C4': (59.652,123.731,85.006)
C2': (60.017,121.845,83.611)
C2: (56.801,117.892,83.611)
N1: (56.035,117.711,82.533)
N3: (57.400,118.999,84.044)
N6: (55.044,118.579,80.644)
N7: (56.301,121.265,81.499)
N9: (57.641,121.310,83.308)
O5': (58.811,126.012,84.837)
O3': (61.205,121.972,85.713)
Image (generated by PyMOL):