ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A483:A513

Extra

PDB:
ATOM 1 O3' C A 482 171.918 103.058 17.852 1.00 78.61 O
ATOM 2 P G A 483 173.322 102.449 17.365 1.00 78.75 P
ATOM 3 OP1 G A 483 174.257 102.617 18.516 1.00 79.03 O
ATOM 4 OP2 G A 483 173.102 101.092 16.804 1.00 79.06 O
ATOM 5 O5' G A 483 173.756 103.416 16.192 1.00 76.43 O
ATOM 6 C5' G A 483 174.321 104.688 16.475 1.00 75.47 C
ATOM 7 C4' G A 483 174.697 105.382 15.199 1.00 74.99 C
ATOM 8 O4' G A 483 175.550 104.506 14.416 1.00 75.50 O
ATOM 9 C3' G A 483 173.557 105.723 14.260 1.00 74.99 C
ATOM 10 O3' G A 483 172.914 106.925 14.651 1.00 75.02 O
ATOM 11 C2' G A 483 174.274 105.829 12.916 1.00 75.12 C
ATOM 12 O2' G A 483 174.961 107.061 12.752 1.00 74.26 O
ATOM 13 C1' G A 483 175.313 104.710 13.031 1.00 74.28 C
ATOM 14 N9 G A 483 174.868 103.446 12.442 1.00 72.69 N
ATOM 15 C8 G A 483 174.608 102.267 13.107 1.00 72.76 C
ATOM 16 N7 G A 483 174.171 101.318 12.324 1.00 72.00 N
ATOM 17 C5 G A 483 174.149 101.896 11.059 1.00 71.69 C
ATOM 18 C6 G A 483 173.745 101.354 9.808 1.00 70.26 C
ATOM 19 O6 G A 483 173.317 100.222 9.564 1.00 69.28 O
ATOM 20 N1 G A 483 173.875 102.285 8.781 1.00 69.44 N
ATOM 21 C2 G A 483 174.331 103.571 8.935 1.00 69.28 C
ATOM 22 N2 G A 483 174.358 104.316 7.832 1.00 68.08 N
ATOM 23 N3 G A 483 174.720 104.089 10.091 1.00 70.57 N
ATOM 24 C4 G A 483 174.595 103.203 11.108 1.00 72.00 C
ATOM 25 P G A 484 171.331 107.092 14.421 1.00 74.63 P
ATOM 26 OP1 G A 484 170.922 108.356 15.102 1.00 74.60 O
ATOM 27 OP2 G A 484 170.670 105.821 14.789 1.00 74.11 O
ATOM 28 O5' G A 484 171.203 107.318 12.856 1.00 73.88 O
TER

ATOM 1 O3' U B 512 179.018 102.460 19.328 1.00 82.67 O
ATOM 2 P A B 513 179.374 101.554 18.059 1.00 80.57 P
ATOM 3 OP1 A B 513 179.541 100.182 18.628 1.00 79.71 O
ATOM 4 OP2 A B 513 180.469 102.206 17.300 1.00 80.12 O
ATOM 5 O5' A B 513 178.069 101.607 17.152 1.00 79.07 O
ATOM 6 C5' A B 513 176.974 100.700 17.359 1.00 76.34 C
ATOM 7 C4' A B 513 176.838 99.776 16.174 1.00 74.01 C
ATOM 8 O4' A B 513 176.633 100.555 14.967 1.00 73.11 O
ATOM 9 C3' A B 513 178.039 98.881 15.899 1.00 73.24 C
ATOM 10 O3' A B 513 177.545 97.624 15.469 1.00 74.47 O
ATOM 11 C2' A B 513 178.749 99.603 14.756 1.00 71.99 C
ATOM 12 O2' A B 513 179.516 98.778 13.913 1.00 72.66 O
ATOM 13 C1' A B 513 177.562 100.154 13.990 1.00 71.80 C
ATOM 14 N9 A B 513 177.840 101.274 13.097 1.00 71.13 N
ATOM 15 C8 A B 513 178.312 102.528 13.387 1.00 71.93 C
ATOM 16 N7 A B 513 178.428 103.306 12.335 1.00 71.01 N
ATOM 17 C5 A B 513 178.006 102.506 11.283 1.00 70.61 C
ATOM 18 C6 A B 513 177.893 102.741 9.908 1.00 69.60 C
ATOM 19 N6 A B 513 178.204 103.897 9.334 1.00 69.06 N
ATOM 20 N1 A B 513 177.445 101.734 9.131 1.00 68.87 N
ATOM 21 C2 A B 513 177.130 100.572 9.710 1.00 69.58 C
ATOM 22 N3 A B 513 177.189 100.228 10.993 1.00 69.89 N
ATOM 23 C4 A B 513 177.644 101.252 11.736 1.00 70.93 C
ATOM 24 P C B 514 176.977 96.578 16.553 1.00 76.51 P
ATOM 25 OP1 C B 514 175.674 96.035 16.050 1.00 75.51 O
ATOM 26 OP2 C B 514 177.023 97.246 17.874 1.00 77.27 O
ATOM 27 O5' C B 514 178.046 95.404 16.555 1.00 78.39 O
TER

Atoms:
OP1: (174.257,102.617,18.516)
OP2: (173.102,101.092,16.804)
C3': (173.557,105.723,14.260)
C1': (175.313,104.710,13.031)
C5': (174.321,104.688,16.475)
O6: (173.317,100.222,9.564)
O4': (175.550,104.506,14.416)
C8: (174.608,102.267,13.107)
C2: (174.331,103.571,8.935)
C6: (173.745,101.354,9.808)
C5: (174.149,101.896,11.059)
C4: (174.595,103.203,11.108)
P: (173.322,102.449,17.365)
C4': (174.697,105.382,15.199)
C2': (174.274,105.829,12.916)
O2': (174.961,107.061,12.752)
N1: (173.875,102.285,8.781)
N2: (174.358,104.316,7.832)
N3: (174.720,104.089,10.091)
N7: (174.171,101.318,12.324)
N9: (174.868,103.446,12.442)
O5': (173.756,103.416,16.192)
O3': (172.914,106.925,14.651)
OP1: (179.541,100.182,18.628)
OP2: (180.469,102.206,17.300)
C3': (178.039,98.881,15.899)
C1': (177.562,100.154,13.990)
C5': (176.974,100.700,17.359)
O4': (176.633,100.555,14.967)
C8: (178.312,102.528,13.387)
O2': (179.516,98.778,13.913)
C6: (177.893,102.741,9.908)
C5: (178.006,102.506,11.283)
C4: (177.644,101.252,11.736)
P: (179.374,101.554,18.059)
C4': (176.838,99.776,16.174)
C2': (178.749,99.603,14.756)
C2: (177.130,100.572,9.710)
N1: (177.445,101.734,9.131)
N3: (177.189,100.228,10.993)
N6: (178.204,103.897,9.334)
N7: (178.428,103.306,12.335)
N9: (177.840,101.274,13.097)
O5': (178.069,101.607,17.152)
O3': (177.545,97.624,15.469)
Image (generated by PyMOL):
PyMOL image
show in jmol