ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A443:A245

Extra

PDB:
ATOM 1 O3' U A 442 58.217 -56.377 -85.267 1.00 50.13 O
ATOM 2 P A A 443 58.843 -56.928 -83.914 1.00 50.64 P
ATOM 3 OP1 A A 443 58.839 -55.879 -82.858 1.00 52.43 O
ATOM 4 OP2 A A 443 60.117 -57.587 -84.276 1.00 60.18 O
ATOM 5 O5' A A 443 57.780 -58.053 -83.554 1.00 52.42 O
ATOM 6 C5' A A 443 58.189 -59.390 -83.372 1.00 60.02 C
ATOM 7 C4' A A 443 57.732 -60.261 -84.519 1.00 59.08 C
ATOM 8 O4' A A 443 58.034 -59.664 -85.804 1.00 54.41 O
ATOM 9 C3' A A 443 58.486 -61.575 -84.514 1.00 63.52 C
ATOM 10 O3' A A 443 57.881 -62.457 -83.600 1.00 65.15 O
ATOM 11 C2' A A 443 58.470 -62.022 -85.968 1.00 60.80 C
ATOM 12 O2' A A 443 57.358 -62.800 -86.355 1.00 58.42 O
ATOM 13 C1' A A 443 58.493 -60.673 -86.697 1.00 62.55 C
ATOM 14 N9 A A 443 59.837 -60.315 -87.159 1.00 66.27 N
ATOM 15 C8 A A 443 60.525 -59.146 -86.938 1.00 64.37 C
ATOM 16 N7 A A 443 61.695 -59.107 -87.523 1.00 66.63 N
ATOM 17 C5 A A 443 61.792 -60.332 -88.165 1.00 61.31 C
ATOM 18 C6 A A 443 62.782 -60.894 -88.979 1.00 61.96 C
ATOM 19 N6 A A 443 63.911 -60.263 -89.304 1.00 59.27 N
ATOM 20 N1 A A 443 62.571 -62.138 -89.460 1.00 64.99 N
ATOM 21 C2 A A 443 61.430 -62.760 -89.138 1.00 64.58 C
ATOM 22 N3 A A 443 60.419 -62.331 -88.389 1.00 60.92 N
ATOM 23 C4 A A 443 60.665 -61.094 -87.932 1.00 60.57 C
ATOM 24 P A A 444 58.616 -62.763 -82.217 1.00 70.10 P
ATOM 25 OP1 A A 444 57.567 -63.172 -81.255 1.00 69.16 O
ATOM 26 OP2 A A 444 59.509 -61.629 -81.879 1.00 56.19 O
ATOM 27 O5' A A 444 59.542 -63.999 -82.599 1.00 66.21 O
TER

ATOM 1 O3' C B 244 64.711 -68.117 -87.178 1.00 61.53 O
ATOM 2 P C B 245 64.171 -68.201 -88.688 1.00 61.31 P
ATOM 3 OP1 C B 245 62.687 -68.062 -88.694 1.00 68.08 O
ATOM 4 OP2 C B 245 64.799 -69.395 -89.314 1.00 56.44 O
ATOM 5 O5' C B 245 64.816 -66.883 -89.312 1.00 59.21 O
ATOM 6 C5' C B 245 64.270 -66.256 -90.451 1.00 62.98 C
ATOM 7 C4' C B 245 64.678 -64.812 -90.471 1.00 62.12 C
ATOM 8 O4' C B 245 65.908 -64.663 -89.719 1.00 62.52 O
ATOM 9 C3' C B 245 65.019 -64.295 -91.860 1.00 67.47 C
ATOM 10 O3' C B 245 63.912 -63.876 -92.640 1.00 70.08 O
ATOM 11 C2' C B 245 66.010 -63.175 -91.576 1.00 67.92 C
ATOM 12 O2' C B 245 65.447 -61.911 -91.303 1.00 68.27 O
ATOM 13 C1' C B 245 66.756 -63.721 -90.363 1.00 65.32 C
ATOM 14 N1 C B 245 67.987 -64.401 -90.806 1.00 64.22 N
ATOM 15 C2 C B 245 68.984 -63.642 -91.468 1.00 65.75 C
ATOM 16 O2 C B 245 68.813 -62.418 -91.637 1.00 67.95 O
ATOM 17 N3 C B 245 70.098 -64.265 -91.903 1.00 63.28 N
ATOM 18 C4 C B 245 70.251 -65.576 -91.702 1.00 63.37 C
ATOM 19 N4 C B 245 71.365 -66.151 -92.146 1.00 68.89 N
ATOM 20 C5 C B 245 69.267 -66.361 -91.033 1.00 63.34 C
ATOM 21 C6 C B 245 68.165 -65.741 -90.605 1.00 65.00 C
ATOM 22 P A B 246 64.161 -63.403 -94.156 1.00 71.19 P
ATOM 23 OP1 A B 246 63.105 -64.033 -94.988 1.00 59.87 O
ATOM 24 OP2 A B 246 65.588 -63.624 -94.502 1.00 70.73 O
ATOM 25 O5' A B 246 63.959 -61.825 -94.063 1.00 62.63 O
TER

Atoms:
OP1: (58.839,-55.879,-82.858)
OP2: (60.117,-57.587,-84.276)
C3': (58.486,-61.575,-84.514)
C1': (58.493,-60.673,-86.697)
C5': (58.189,-59.390,-83.372)
O4': (58.034,-59.664,-85.804)
C8: (60.525,-59.146,-86.938)
O2': (57.358,-62.800,-86.355)
C6: (62.782,-60.894,-88.979)
C5: (61.792,-60.332,-88.165)
C4: (60.665,-61.094,-87.932)
P: (58.843,-56.928,-83.914)
C4': (57.732,-60.261,-84.519)
C2': (58.470,-62.022,-85.968)
C2: (61.430,-62.760,-89.138)
N1: (62.571,-62.138,-89.460)
N3: (60.419,-62.331,-88.389)
N6: (63.911,-60.263,-89.304)
N7: (61.695,-59.107,-87.523)
N9: (59.837,-60.315,-87.159)
O5': (57.780,-58.053,-83.554)
O3': (57.881,-62.457,-83.600)
C2: (68.984,-63.642,-91.468)
OP1: (62.687,-68.062,-88.694)
OP2: (64.799,-69.395,-89.314)
C4: (70.251,-65.576,-91.702)
O5': (64.816,-66.883,-89.312)
C3': (65.019,-64.295,-91.860)
C1': (66.756,-63.721,-90.363)
O4': (65.908,-64.663,-89.719)
C5': (64.270,-66.256,-90.451)
P: (64.171,-68.201,-88.688)
O2: (68.813,-62.418,-91.637)
C4': (64.678,-64.812,-90.471)
C2': (66.010,-63.175,-91.576)
O2': (65.447,-61.911,-91.303)
N1: (67.987,-64.401,-90.806)
N3: (70.098,-64.265,-91.903)
N4: (71.365,-66.151,-92.146)
C6: (68.165,-65.741,-90.605)
C5: (69.267,-66.361,-91.033)
O3': (63.912,-63.876,-92.640)
Image (generated by PyMOL):
PyMOL image
show in jmol