Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A872:A870
Extra
PDB:
ATOM 1 O3' A A 871 -15.347 91.023 63.126 1.00 14.76 O
ATOM 2 P G A 872 -14.733 89.572 63.384 1.00 14.23 P
ATOM 3 OP1 G A 872 -15.857 88.692 63.836 1.00 14.23 O
ATOM 4 OP2 G A 872 -13.553 89.765 64.273 1.00 14.23 O
ATOM 5 O5' G A 872 -14.253 89.139 61.933 1.00 14.23 O
ATOM 6 C5' G A 872 -15.155 89.146 60.834 1.00 14.23 C
ATOM 7 C4' G A 872 -14.473 88.661 59.591 1.00 14.23 C
ATOM 8 O4' G A 872 -13.764 89.763 58.968 1.00 14.23 O
ATOM 9 C3' G A 872 -13.419 87.585 59.816 1.00 14.23 C
ATOM 10 O3' G A 872 -13.973 86.274 59.824 1.00 14.23 O
ATOM 11 C2' G A 872 -12.412 87.828 58.696 1.00 14.23 C
ATOM 12 O2' G A 872 -12.792 87.158 57.507 1.00 14.23 O
ATOM 13 C1' G A 872 -12.527 89.335 58.466 1.00 14.23 C
ATOM 14 N9 G A 872 -11.477 90.069 59.161 1.00 21.40 N
ATOM 15 C8 G A 872 -11.627 90.978 60.162 1.00 21.40 C
ATOM 16 N7 G A 872 -10.490 91.453 60.562 1.00 21.40 N
ATOM 17 C5 G A 872 -9.544 90.805 59.776 1.00 21.40 C
ATOM 18 C6 G A 872 -8.121 90.884 59.743 1.00 21.40 C
ATOM 19 O6 G A 872 -7.374 91.585 60.439 1.00 21.40 O
ATOM 20 N1 G A 872 -7.554 90.035 58.787 1.00 21.40 N
ATOM 21 C2 G A 872 -8.271 89.205 57.958 1.00 21.40 C
ATOM 22 N2 G A 872 -7.553 88.461 57.095 1.00 21.40 N
ATOM 23 N3 G A 872 -9.600 89.127 57.980 1.00 21.40 N
ATOM 24 C4 G A 872 -10.152 89.946 58.903 1.00 21.40 C
ATOM 25 P U A 873 -13.156 85.038 60.444 1.00 17.09 P
ATOM 26 OP1 U A 873 -13.831 83.799 59.979 1.00 17.09 O
ATOM 27 OP2 U A 873 -13.013 85.274 61.886 1.00 17.09 O
ATOM 28 O5' U A 873 -11.754 85.167 59.761 1.00 17.09 O
TER
ATOM 1 O3' U B 869 -9.116 99.395 63.241 1.00 29.47 O
ATOM 2 P A B 870 -8.887 97.901 63.711 1.00 30.82 P
ATOM 3 OP1 A B 870 -9.337 97.817 65.111 1.00 30.82 O
ATOM 4 OP2 A B 870 -7.488 97.555 63.394 1.00 30.82 O
ATOM 5 O5' A B 870 -9.879 97.096 62.773 1.00 30.82 O
ATOM 6 C5' A B 870 -11.184 97.598 62.511 1.00 30.82 C
ATOM 7 C4' A B 870 -12.247 96.547 62.724 1.00 30.82 C
ATOM 8 O4' A B 870 -12.650 95.976 61.433 1.00 30.82 O
ATOM 9 C3' A B 870 -11.834 95.356 63.591 1.00 30.82 C
ATOM 10 O3' A B 870 -12.982 94.890 64.295 1.00 30.82 O
ATOM 11 C2' A B 870 -11.442 94.319 62.538 1.00 30.82 C
ATOM 12 O2' A B 870 -11.439 92.984 62.990 1.00 30.82 O
ATOM 13 C1' A B 870 -12.534 94.563 61.507 1.00 30.82 C
ATOM 14 N9 A B 870 -12.275 94.009 60.165 1.00 30.91 N
ATOM 15 C8 A B 870 -13.263 93.531 59.330 1.00 30.91 C
ATOM 16 N7 A B 870 -12.828 93.067 58.186 1.00 30.91 N
ATOM 17 C5 A B 870 -11.445 93.234 58.257 1.00 30.91 C
ATOM 18 C6 A B 870 -10.396 92.932 57.353 1.00 30.91 C
ATOM 19 N6 A B 870 -10.577 92.385 56.156 1.00 30.91 N
ATOM 20 N1 A B 870 -9.132 93.213 57.709 1.00 30.91 N
ATOM 21 C2 A B 870 -8.954 93.769 58.911 1.00 30.91 C
ATOM 22 N3 A B 870 -9.845 94.099 59.849 1.00 30.91 N
ATOM 23 C4 A B 870 -11.096 93.811 59.468 1.00 30.91 C
ATOM 24 P A B 871 -13.087 94.996 65.893 1.00 14.76 P
ATOM 25 OP1 A B 871 -13.480 96.374 66.215 1.00 14.76 O
ATOM 26 OP2 A B 871 -11.820 94.462 66.469 1.00 14.76 O
ATOM 27 O5' A B 871 -14.289 94.008 66.208 1.00 14.76 O
TER
ATOM 2 P G A 872 -14.733 89.572 63.384 1.00 14.23 P
ATOM 3 OP1 G A 872 -15.857 88.692 63.836 1.00 14.23 O
ATOM 4 OP2 G A 872 -13.553 89.765 64.273 1.00 14.23 O
ATOM 5 O5' G A 872 -14.253 89.139 61.933 1.00 14.23 O
ATOM 6 C5' G A 872 -15.155 89.146 60.834 1.00 14.23 C
ATOM 7 C4' G A 872 -14.473 88.661 59.591 1.00 14.23 C
ATOM 8 O4' G A 872 -13.764 89.763 58.968 1.00 14.23 O
ATOM 9 C3' G A 872 -13.419 87.585 59.816 1.00 14.23 C
ATOM 10 O3' G A 872 -13.973 86.274 59.824 1.00 14.23 O
ATOM 11 C2' G A 872 -12.412 87.828 58.696 1.00 14.23 C
ATOM 12 O2' G A 872 -12.792 87.158 57.507 1.00 14.23 O
ATOM 13 C1' G A 872 -12.527 89.335 58.466 1.00 14.23 C
ATOM 14 N9 G A 872 -11.477 90.069 59.161 1.00 21.40 N
ATOM 15 C8 G A 872 -11.627 90.978 60.162 1.00 21.40 C
ATOM 16 N7 G A 872 -10.490 91.453 60.562 1.00 21.40 N
ATOM 17 C5 G A 872 -9.544 90.805 59.776 1.00 21.40 C
ATOM 18 C6 G A 872 -8.121 90.884 59.743 1.00 21.40 C
ATOM 19 O6 G A 872 -7.374 91.585 60.439 1.00 21.40 O
ATOM 20 N1 G A 872 -7.554 90.035 58.787 1.00 21.40 N
ATOM 21 C2 G A 872 -8.271 89.205 57.958 1.00 21.40 C
ATOM 22 N2 G A 872 -7.553 88.461 57.095 1.00 21.40 N
ATOM 23 N3 G A 872 -9.600 89.127 57.980 1.00 21.40 N
ATOM 24 C4 G A 872 -10.152 89.946 58.903 1.00 21.40 C
ATOM 25 P U A 873 -13.156 85.038 60.444 1.00 17.09 P
ATOM 26 OP1 U A 873 -13.831 83.799 59.979 1.00 17.09 O
ATOM 27 OP2 U A 873 -13.013 85.274 61.886 1.00 17.09 O
ATOM 28 O5' U A 873 -11.754 85.167 59.761 1.00 17.09 O
TER
ATOM 1 O3' U B 869 -9.116 99.395 63.241 1.00 29.47 O
ATOM 2 P A B 870 -8.887 97.901 63.711 1.00 30.82 P
ATOM 3 OP1 A B 870 -9.337 97.817 65.111 1.00 30.82 O
ATOM 4 OP2 A B 870 -7.488 97.555 63.394 1.00 30.82 O
ATOM 5 O5' A B 870 -9.879 97.096 62.773 1.00 30.82 O
ATOM 6 C5' A B 870 -11.184 97.598 62.511 1.00 30.82 C
ATOM 7 C4' A B 870 -12.247 96.547 62.724 1.00 30.82 C
ATOM 8 O4' A B 870 -12.650 95.976 61.433 1.00 30.82 O
ATOM 9 C3' A B 870 -11.834 95.356 63.591 1.00 30.82 C
ATOM 10 O3' A B 870 -12.982 94.890 64.295 1.00 30.82 O
ATOM 11 C2' A B 870 -11.442 94.319 62.538 1.00 30.82 C
ATOM 12 O2' A B 870 -11.439 92.984 62.990 1.00 30.82 O
ATOM 13 C1' A B 870 -12.534 94.563 61.507 1.00 30.82 C
ATOM 14 N9 A B 870 -12.275 94.009 60.165 1.00 30.91 N
ATOM 15 C8 A B 870 -13.263 93.531 59.330 1.00 30.91 C
ATOM 16 N7 A B 870 -12.828 93.067 58.186 1.00 30.91 N
ATOM 17 C5 A B 870 -11.445 93.234 58.257 1.00 30.91 C
ATOM 18 C6 A B 870 -10.396 92.932 57.353 1.00 30.91 C
ATOM 19 N6 A B 870 -10.577 92.385 56.156 1.00 30.91 N
ATOM 20 N1 A B 870 -9.132 93.213 57.709 1.00 30.91 N
ATOM 21 C2 A B 870 -8.954 93.769 58.911 1.00 30.91 C
ATOM 22 N3 A B 870 -9.845 94.099 59.849 1.00 30.91 N
ATOM 23 C4 A B 870 -11.096 93.811 59.468 1.00 30.91 C
ATOM 24 P A B 871 -13.087 94.996 65.893 1.00 14.76 P
ATOM 25 OP1 A B 871 -13.480 96.374 66.215 1.00 14.76 O
ATOM 26 OP2 A B 871 -11.820 94.462 66.469 1.00 14.76 O
ATOM 27 O5' A B 871 -14.289 94.008 66.208 1.00 14.76 O
TER
Atoms:
OP1: (-15.857,88.692,63.836)
OP2: (-13.553,89.765,64.273)
C3': (-13.419,87.585,59.816)
C1': (-12.527,89.335,58.466)
C5': (-15.155,89.146,60.834)
O6: (-7.374,91.585,60.439)
O4': (-13.764,89.763,58.968)
C8: (-11.627,90.978,60.162)
C2: (-8.271,89.205,57.958)
C6: (-8.121,90.884,59.743)
C5: (-9.544,90.805,59.776)
C4: (-10.152,89.946,58.903)
P: (-14.733,89.572,63.384)
C4': (-14.473,88.661,59.591)
C2': (-12.412,87.828,58.696)
O2': (-12.792,87.158,57.507)
N1: (-7.554,90.035,58.787)
N2: (-7.553,88.461,57.095)
N3: (-9.600,89.127,57.980)
N7: (-10.490,91.453,60.562)
N9: (-11.477,90.069,59.161)
O5': (-14.253,89.139,61.933)
O3': (-13.973,86.274,59.824)
OP2: (-13.553,89.765,64.273)
C3': (-13.419,87.585,59.816)
C1': (-12.527,89.335,58.466)
C5': (-15.155,89.146,60.834)
O6: (-7.374,91.585,60.439)
O4': (-13.764,89.763,58.968)
C8: (-11.627,90.978,60.162)
C2: (-8.271,89.205,57.958)
C6: (-8.121,90.884,59.743)
C5: (-9.544,90.805,59.776)
C4: (-10.152,89.946,58.903)
P: (-14.733,89.572,63.384)
C4': (-14.473,88.661,59.591)
C2': (-12.412,87.828,58.696)
O2': (-12.792,87.158,57.507)
N1: (-7.554,90.035,58.787)
N2: (-7.553,88.461,57.095)
N3: (-9.600,89.127,57.980)
N7: (-10.490,91.453,60.562)
N9: (-11.477,90.069,59.161)
O5': (-14.253,89.139,61.933)
O3': (-13.973,86.274,59.824)
OP1: (-9.337,97.817,65.111)
OP2: (-7.488,97.555,63.394)
C3': (-11.834,95.356,63.591)
C1': (-12.534,94.563,61.507)
C5': (-11.184,97.598,62.511)
O4': (-12.650,95.976,61.433)
C8: (-13.263,93.531,59.330)
O2': (-11.439,92.984,62.990)
C6: (-10.396,92.932,57.353)
C5: (-11.445,93.234,58.257)
C4: (-11.096,93.811,59.468)
P: (-8.887,97.901,63.711)
C4': (-12.247,96.547,62.724)
C2': (-11.442,94.319,62.538)
C2: (-8.954,93.769,58.911)
N1: (-9.132,93.213,57.709)
N3: (-9.845,94.099,59.849)
N6: (-10.577,92.385,56.156)
N7: (-12.828,93.067,58.186)
N9: (-12.275,94.009,60.165)
O5': (-9.879,97.096,62.773)
O3': (-12.982,94.890,64.295)
OP2: (-7.488,97.555,63.394)
C3': (-11.834,95.356,63.591)
C1': (-12.534,94.563,61.507)
C5': (-11.184,97.598,62.511)
O4': (-12.650,95.976,61.433)
C8: (-13.263,93.531,59.330)
O2': (-11.439,92.984,62.990)
C6: (-10.396,92.932,57.353)
C5: (-11.445,93.234,58.257)
C4: (-11.096,93.811,59.468)
P: (-8.887,97.901,63.711)
C4': (-12.247,96.547,62.724)
C2': (-11.442,94.319,62.538)
C2: (-8.954,93.769,58.911)
N1: (-9.132,93.213,57.709)
N3: (-9.845,94.099,59.849)
N6: (-10.577,92.385,56.156)
N7: (-12.828,93.067,58.186)
N9: (-12.275,94.009,60.165)
O5': (-9.879,97.096,62.773)
O3': (-12.982,94.890,64.295)
Image (generated by PyMOL):