Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:022:0448
Extra
PDB:
ATOM 1 O3' C A 21 38.623 139.578 44.019 1.00 41.34 O
ATOM 2 P G A 22 39.607 138.463 43.438 1.00 38.02 P
ATOM 3 OP1 G A 22 40.546 139.144 42.519 1.00 39.44 O
ATOM 4 OP2 G A 22 38.819 137.301 42.961 1.00 39.94 O
ATOM 5 O5' G A 22 40.419 137.967 44.705 1.00 38.92 O
ATOM 6 C5' G A 22 41.138 138.881 45.537 1.00 34.48 C
ATOM 7 C4' G A 22 41.684 138.143 46.725 1.00 35.45 C
ATOM 8 O4' G A 22 40.575 137.680 47.543 1.00 37.27 O
ATOM 9 C3' G A 22 42.445 136.872 46.382 1.00 34.83 C
ATOM 10 O3' G A 22 43.790 137.159 46.018 1.00 33.11 O
ATOM 11 C2' G A 22 42.315 136.075 47.671 1.00 35.38 C
ATOM 12 O2' G A 22 43.177 136.569 48.668 1.00 37.01 O
ATOM 13 C1' G A 22 40.875 136.402 48.079 1.00 36.84 C
ATOM 14 N9 G A 22 39.893 135.445 47.572 1.00 38.81 N
ATOM 15 C8 G A 22 39.132 135.555 46.434 1.00 38.67 C
ATOM 16 N7 G A 22 38.363 134.521 46.226 1.00 41.80 N
ATOM 17 C5 G A 22 38.623 133.678 47.297 1.00 41.54 C
ATOM 18 C6 G A 22 38.087 132.399 47.618 1.00 42.04 C
ATOM 19 O6 G A 22 37.245 131.735 47.002 1.00 40.02 O
ATOM 20 N1 G A 22 38.634 131.897 48.796 1.00 42.50 N
ATOM 21 C2 G A 22 39.570 132.537 49.569 1.00 41.87 C
ATOM 22 N2 G A 22 39.982 131.884 50.661 1.00 41.76 N
ATOM 23 N3 G A 22 40.070 133.728 49.288 1.00 42.98 N
ATOM 24 C4 G A 22 39.558 134.236 48.143 1.00 42.10 C
ATOM 25 P G A 23 44.722 135.999 45.419 1.00 33.52 P
ATOM 26 OP1 G A 23 46.025 136.590 45.069 1.00 31.19 O
ATOM 27 OP2 G A 23 43.952 135.273 44.382 1.00 33.80 O
ATOM 28 O5' G A 23 44.943 135.040 46.674 1.00 34.64 O
TER
ATOM 1 O3' A B 447 45.614 138.961 53.204 1.00 31.26 O
ATOM 2 P A B 448 44.160 138.298 53.041 1.00 32.99 P
ATOM 3 OP1 A B 448 43.450 138.408 54.330 1.00 30.46 O
ATOM 4 OP2 A B 448 44.291 136.969 52.380 1.00 33.59 O
ATOM 5 O5' A B 448 43.421 139.288 52.041 1.00 32.58 O
ATOM 6 C5' A B 448 43.814 139.370 50.663 1.00 31.82 C
ATOM 7 C4' A B 448 42.644 139.807 49.819 1.00 33.73 C
ATOM 8 O4' A B 448 41.657 138.748 49.747 1.00 34.30 O
ATOM 9 C3' A B 448 41.895 141.039 50.308 1.00 33.92 C
ATOM 10 O3' A B 448 41.451 141.739 49.162 1.00 34.99 O
ATOM 11 C2' A B 448 40.726 140.439 51.081 1.00 33.15 C
ATOM 12 O2' A B 448 39.601 141.285 51.140 1.00 33.08 O
ATOM 13 C1' A B 448 40.413 139.214 50.234 1.00 34.23 C
ATOM 14 N9 A B 448 39.782 138.111 50.956 1.00 36.04 N
ATOM 15 C8 A B 448 40.143 137.563 52.159 1.00 36.25 C
ATOM 16 N7 A B 448 39.425 136.526 52.503 1.00 37.91 N
ATOM 17 C5 A B 448 38.519 136.387 51.462 1.00 39.28 C
ATOM 18 C6 A B 448 37.497 135.451 51.208 1.00 38.12 C
ATOM 19 N6 A B 448 37.212 134.428 52.010 1.00 38.41 N
ATOM 20 N1 A B 448 36.777 135.601 50.080 1.00 37.78 N
ATOM 21 C2 A B 448 37.071 136.615 49.263 1.00 38.02 C
ATOM 22 N3 A B 448 38.009 137.550 49.383 1.00 39.08 N
ATOM 23 C4 A B 448 38.710 137.375 50.515 1.00 38.73 C
ATOM 24 P C B 449 42.358 142.919 48.567 1.00 35.68 P
ATOM 25 OP1 C B 449 41.696 143.425 47.341 1.00 37.49 O
ATOM 26 OP2 C B 449 43.754 142.428 48.495 1.00 31.71 O
ATOM 27 O5' C B 449 42.237 144.044 49.680 1.00 31.83 O
TER
ATOM 2 P G A 22 39.607 138.463 43.438 1.00 38.02 P
ATOM 3 OP1 G A 22 40.546 139.144 42.519 1.00 39.44 O
ATOM 4 OP2 G A 22 38.819 137.301 42.961 1.00 39.94 O
ATOM 5 O5' G A 22 40.419 137.967 44.705 1.00 38.92 O
ATOM 6 C5' G A 22 41.138 138.881 45.537 1.00 34.48 C
ATOM 7 C4' G A 22 41.684 138.143 46.725 1.00 35.45 C
ATOM 8 O4' G A 22 40.575 137.680 47.543 1.00 37.27 O
ATOM 9 C3' G A 22 42.445 136.872 46.382 1.00 34.83 C
ATOM 10 O3' G A 22 43.790 137.159 46.018 1.00 33.11 O
ATOM 11 C2' G A 22 42.315 136.075 47.671 1.00 35.38 C
ATOM 12 O2' G A 22 43.177 136.569 48.668 1.00 37.01 O
ATOM 13 C1' G A 22 40.875 136.402 48.079 1.00 36.84 C
ATOM 14 N9 G A 22 39.893 135.445 47.572 1.00 38.81 N
ATOM 15 C8 G A 22 39.132 135.555 46.434 1.00 38.67 C
ATOM 16 N7 G A 22 38.363 134.521 46.226 1.00 41.80 N
ATOM 17 C5 G A 22 38.623 133.678 47.297 1.00 41.54 C
ATOM 18 C6 G A 22 38.087 132.399 47.618 1.00 42.04 C
ATOM 19 O6 G A 22 37.245 131.735 47.002 1.00 40.02 O
ATOM 20 N1 G A 22 38.634 131.897 48.796 1.00 42.50 N
ATOM 21 C2 G A 22 39.570 132.537 49.569 1.00 41.87 C
ATOM 22 N2 G A 22 39.982 131.884 50.661 1.00 41.76 N
ATOM 23 N3 G A 22 40.070 133.728 49.288 1.00 42.98 N
ATOM 24 C4 G A 22 39.558 134.236 48.143 1.00 42.10 C
ATOM 25 P G A 23 44.722 135.999 45.419 1.00 33.52 P
ATOM 26 OP1 G A 23 46.025 136.590 45.069 1.00 31.19 O
ATOM 27 OP2 G A 23 43.952 135.273 44.382 1.00 33.80 O
ATOM 28 O5' G A 23 44.943 135.040 46.674 1.00 34.64 O
TER
ATOM 1 O3' A B 447 45.614 138.961 53.204 1.00 31.26 O
ATOM 2 P A B 448 44.160 138.298 53.041 1.00 32.99 P
ATOM 3 OP1 A B 448 43.450 138.408 54.330 1.00 30.46 O
ATOM 4 OP2 A B 448 44.291 136.969 52.380 1.00 33.59 O
ATOM 5 O5' A B 448 43.421 139.288 52.041 1.00 32.58 O
ATOM 6 C5' A B 448 43.814 139.370 50.663 1.00 31.82 C
ATOM 7 C4' A B 448 42.644 139.807 49.819 1.00 33.73 C
ATOM 8 O4' A B 448 41.657 138.748 49.747 1.00 34.30 O
ATOM 9 C3' A B 448 41.895 141.039 50.308 1.00 33.92 C
ATOM 10 O3' A B 448 41.451 141.739 49.162 1.00 34.99 O
ATOM 11 C2' A B 448 40.726 140.439 51.081 1.00 33.15 C
ATOM 12 O2' A B 448 39.601 141.285 51.140 1.00 33.08 O
ATOM 13 C1' A B 448 40.413 139.214 50.234 1.00 34.23 C
ATOM 14 N9 A B 448 39.782 138.111 50.956 1.00 36.04 N
ATOM 15 C8 A B 448 40.143 137.563 52.159 1.00 36.25 C
ATOM 16 N7 A B 448 39.425 136.526 52.503 1.00 37.91 N
ATOM 17 C5 A B 448 38.519 136.387 51.462 1.00 39.28 C
ATOM 18 C6 A B 448 37.497 135.451 51.208 1.00 38.12 C
ATOM 19 N6 A B 448 37.212 134.428 52.010 1.00 38.41 N
ATOM 20 N1 A B 448 36.777 135.601 50.080 1.00 37.78 N
ATOM 21 C2 A B 448 37.071 136.615 49.263 1.00 38.02 C
ATOM 22 N3 A B 448 38.009 137.550 49.383 1.00 39.08 N
ATOM 23 C4 A B 448 38.710 137.375 50.515 1.00 38.73 C
ATOM 24 P C B 449 42.358 142.919 48.567 1.00 35.68 P
ATOM 25 OP1 C B 449 41.696 143.425 47.341 1.00 37.49 O
ATOM 26 OP2 C B 449 43.754 142.428 48.495 1.00 31.71 O
ATOM 27 O5' C B 449 42.237 144.044 49.680 1.00 31.83 O
TER
Atoms:
OP1: (40.546,139.144,42.519)
OP2: (38.819,137.301,42.961)
C3': (42.445,136.872,46.382)
C1': (40.875,136.402,48.079)
C5': (41.138,138.881,45.537)
O6: (37.245,131.735,47.002)
O4': (40.575,137.680,47.543)
C8: (39.132,135.555,46.434)
C2: (39.570,132.537,49.569)
C6: (38.087,132.399,47.618)
C5: (38.623,133.678,47.297)
C4: (39.558,134.236,48.143)
P: (39.607,138.463,43.438)
C4': (41.684,138.143,46.725)
C2': (42.315,136.075,47.671)
O2': (43.177,136.569,48.668)
N1: (38.634,131.897,48.796)
N2: (39.982,131.884,50.661)
N3: (40.070,133.728,49.288)
N7: (38.363,134.521,46.226)
N9: (39.893,135.445,47.572)
O5': (40.419,137.967,44.705)
O3': (43.790,137.159,46.018)
OP2: (38.819,137.301,42.961)
C3': (42.445,136.872,46.382)
C1': (40.875,136.402,48.079)
C5': (41.138,138.881,45.537)
O6: (37.245,131.735,47.002)
O4': (40.575,137.680,47.543)
C8: (39.132,135.555,46.434)
C2: (39.570,132.537,49.569)
C6: (38.087,132.399,47.618)
C5: (38.623,133.678,47.297)
C4: (39.558,134.236,48.143)
P: (39.607,138.463,43.438)
C4': (41.684,138.143,46.725)
C2': (42.315,136.075,47.671)
O2': (43.177,136.569,48.668)
N1: (38.634,131.897,48.796)
N2: (39.982,131.884,50.661)
N3: (40.070,133.728,49.288)
N7: (38.363,134.521,46.226)
N9: (39.893,135.445,47.572)
O5': (40.419,137.967,44.705)
O3': (43.790,137.159,46.018)
OP1: (43.450,138.408,54.330)
OP2: (44.291,136.969,52.380)
C3': (41.895,141.039,50.308)
C1': (40.413,139.214,50.234)
C5': (43.814,139.370,50.663)
O4': (41.657,138.748,49.747)
C8: (40.143,137.563,52.159)
O2': (39.601,141.285,51.140)
C6: (37.497,135.451,51.208)
C5: (38.519,136.387,51.462)
C4: (38.710,137.375,50.515)
P: (44.160,138.298,53.041)
C4': (42.644,139.807,49.819)
C2': (40.726,140.439,51.081)
C2: (37.071,136.615,49.263)
N1: (36.777,135.601,50.080)
N3: (38.009,137.550,49.383)
N6: (37.212,134.428,52.010)
N7: (39.425,136.526,52.503)
N9: (39.782,138.111,50.956)
O5': (43.421,139.288,52.041)
O3': (41.451,141.739,49.162)
OP2: (44.291,136.969,52.380)
C3': (41.895,141.039,50.308)
C1': (40.413,139.214,50.234)
C5': (43.814,139.370,50.663)
O4': (41.657,138.748,49.747)
C8: (40.143,137.563,52.159)
O2': (39.601,141.285,51.140)
C6: (37.497,135.451,51.208)
C5: (38.519,136.387,51.462)
C4: (38.710,137.375,50.515)
P: (44.160,138.298,53.041)
C4': (42.644,139.807,49.819)
C2': (40.726,140.439,51.081)
C2: (37.071,136.615,49.263)
N1: (36.777,135.601,50.080)
N3: (38.009,137.550,49.383)
N6: (37.212,134.428,52.010)
N7: (39.425,136.526,52.503)
N9: (39.782,138.111,50.956)
O5': (43.421,139.288,52.041)
O3': (41.451,141.739,49.162)
Image (generated by PyMOL):