Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02378:02047
Extra
PDB:
ATOM 1 O3' C A2377 60.237 118.418 90.182 1.00 39.96 O
ATOM 2 P G A2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 3 OP1 G A2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 4 OP2 G A2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 5 O5' G A2378 58.668 119.910 88.923 1.00 40.06 O
ATOM 6 C5' G A2378 59.182 121.145 88.421 1.00 40.40 C
ATOM 7 C4' G A2378 58.044 121.979 87.906 1.00 43.18 C
ATOM 8 O4' G A2378 57.463 121.312 86.768 1.00 42.62 O
ATOM 9 C3' G A2378 56.879 122.112 88.875 1.00 44.70 C
ATOM 10 O3' G A2378 57.151 123.196 89.766 1.00 48.89 O
ATOM 11 C2' G A2378 55.698 122.412 87.950 1.00 43.85 C
ATOM 12 O2' G A2378 55.584 123.787 87.643 1.00 44.20 O
ATOM 13 C1' G A2378 56.103 121.669 86.671 1.00 44.40 C
ATOM 14 N9 G A2378 55.346 120.494 86.254 1.00 45.62 N
ATOM 15 C8 G A2378 55.361 119.242 86.820 1.00 45.66 C
ATOM 16 N7 G A2378 54.642 118.373 86.160 1.00 45.85 N
ATOM 17 C5 G A2378 54.103 119.100 85.106 1.00 45.93 C
ATOM 18 C6 G A2378 53.256 118.691 84.046 1.00 45.09 C
ATOM 19 O6 G A2378 52.790 117.570 83.824 1.00 44.46 O
ATOM 20 N1 G A2378 52.959 119.748 83.191 1.00 45.12 N
ATOM 21 C2 G A2378 53.410 121.036 83.338 1.00 44.61 C
ATOM 22 N2 G A2378 53.007 121.916 82.415 1.00 43.82 N
ATOM 23 N3 G A2378 54.198 121.431 84.319 1.00 45.23 N
ATOM 24 C4 G A2378 54.508 120.416 85.161 1.00 46.07 C
ATOM 25 P A A2379 56.692 123.123 91.306 1.00 50.58 P
ATOM 26 OP1 A A2379 55.292 122.635 91.369 1.00 52.88 O
ATOM 27 OP2 A A2379 57.034 124.440 91.893 1.00 51.66 O
ATOM 28 O5' A A2379 57.609 122.000 91.964 1.00 49.49 O
TER
ATOM 1 O3' A B2046 59.963 127.970 84.600 1.00 47.86 O
ATOM 2 P A B2047 58.534 127.469 84.051 1.00 45.13 P
ATOM 3 OP1 A B2047 58.593 127.591 82.574 1.00 45.69 O
ATOM 4 OP2 A B2047 57.446 128.152 84.794 1.00 47.15 O
ATOM 5 O5' A B2047 58.482 125.920 84.434 1.00 46.55 O
ATOM 6 C5' A B2047 59.439 124.985 83.890 1.00 45.73 C
ATOM 7 C4' A B2047 59.357 123.656 84.610 1.00 45.08 C
ATOM 8 O4' A B2047 58.117 122.967 84.249 1.00 43.16 O
ATOM 9 C3' A B2047 60.483 122.684 84.253 1.00 45.41 C
ATOM 10 O3' A B2047 60.870 121.913 85.393 1.00 48.56 O
ATOM 11 C2' A B2047 59.817 121.770 83.238 1.00 44.20 C
ATOM 12 O2' A B2047 60.443 120.513 83.081 1.00 41.97 O
ATOM 13 C1' A B2047 58.427 121.649 83.848 1.00 43.65 C
ATOM 14 N9 A B2047 57.443 121.162 82.884 1.00 45.37 N
ATOM 15 C8 A B2047 56.859 121.816 81.829 1.00 45.93 C
ATOM 16 N7 A B2047 56.099 121.046 81.086 1.00 45.57 N
ATOM 17 C5 A B2047 56.169 119.807 81.709 1.00 44.13 C
ATOM 18 C6 A B2047 55.612 118.562 81.398 1.00 43.23 C
ATOM 19 N6 A B2047 54.875 118.330 80.314 1.00 43.23 N
ATOM 20 N1 A B2047 55.858 117.539 82.237 1.00 43.68 N
ATOM 21 C2 A B2047 56.636 117.753 83.299 1.00 43.17 C
ATOM 22 N3 A B2047 57.240 118.866 83.684 1.00 43.83 N
ATOM 23 C4 A B2047 56.964 119.872 82.836 1.00 44.71 C
ATOM 24 P G B2048 62.422 121.550 85.614 1.00 50.05 P
ATOM 25 OP1 G B2048 63.138 122.844 85.744 1.00 52.95 O
ATOM 26 OP2 G B2048 62.858 120.577 84.572 1.00 48.57 O
ATOM 27 O5' G B2048 62.458 120.807 87.022 1.00 48.32 O
TER
ATOM 2 P G A2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 3 OP1 G A2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 4 OP2 G A2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 5 O5' G A2378 58.668 119.910 88.923 1.00 40.06 O
ATOM 6 C5' G A2378 59.182 121.145 88.421 1.00 40.40 C
ATOM 7 C4' G A2378 58.044 121.979 87.906 1.00 43.18 C
ATOM 8 O4' G A2378 57.463 121.312 86.768 1.00 42.62 O
ATOM 9 C3' G A2378 56.879 122.112 88.875 1.00 44.70 C
ATOM 10 O3' G A2378 57.151 123.196 89.766 1.00 48.89 O
ATOM 11 C2' G A2378 55.698 122.412 87.950 1.00 43.85 C
ATOM 12 O2' G A2378 55.584 123.787 87.643 1.00 44.20 O
ATOM 13 C1' G A2378 56.103 121.669 86.671 1.00 44.40 C
ATOM 14 N9 G A2378 55.346 120.494 86.254 1.00 45.62 N
ATOM 15 C8 G A2378 55.361 119.242 86.820 1.00 45.66 C
ATOM 16 N7 G A2378 54.642 118.373 86.160 1.00 45.85 N
ATOM 17 C5 G A2378 54.103 119.100 85.106 1.00 45.93 C
ATOM 18 C6 G A2378 53.256 118.691 84.046 1.00 45.09 C
ATOM 19 O6 G A2378 52.790 117.570 83.824 1.00 44.46 O
ATOM 20 N1 G A2378 52.959 119.748 83.191 1.00 45.12 N
ATOM 21 C2 G A2378 53.410 121.036 83.338 1.00 44.61 C
ATOM 22 N2 G A2378 53.007 121.916 82.415 1.00 43.82 N
ATOM 23 N3 G A2378 54.198 121.431 84.319 1.00 45.23 N
ATOM 24 C4 G A2378 54.508 120.416 85.161 1.00 46.07 C
ATOM 25 P A A2379 56.692 123.123 91.306 1.00 50.58 P
ATOM 26 OP1 A A2379 55.292 122.635 91.369 1.00 52.88 O
ATOM 27 OP2 A A2379 57.034 124.440 91.893 1.00 51.66 O
ATOM 28 O5' A A2379 57.609 122.000 91.964 1.00 49.49 O
TER
ATOM 1 O3' A B2046 59.963 127.970 84.600 1.00 47.86 O
ATOM 2 P A B2047 58.534 127.469 84.051 1.00 45.13 P
ATOM 3 OP1 A B2047 58.593 127.591 82.574 1.00 45.69 O
ATOM 4 OP2 A B2047 57.446 128.152 84.794 1.00 47.15 O
ATOM 5 O5' A B2047 58.482 125.920 84.434 1.00 46.55 O
ATOM 6 C5' A B2047 59.439 124.985 83.890 1.00 45.73 C
ATOM 7 C4' A B2047 59.357 123.656 84.610 1.00 45.08 C
ATOM 8 O4' A B2047 58.117 122.967 84.249 1.00 43.16 O
ATOM 9 C3' A B2047 60.483 122.684 84.253 1.00 45.41 C
ATOM 10 O3' A B2047 60.870 121.913 85.393 1.00 48.56 O
ATOM 11 C2' A B2047 59.817 121.770 83.238 1.00 44.20 C
ATOM 12 O2' A B2047 60.443 120.513 83.081 1.00 41.97 O
ATOM 13 C1' A B2047 58.427 121.649 83.848 1.00 43.65 C
ATOM 14 N9 A B2047 57.443 121.162 82.884 1.00 45.37 N
ATOM 15 C8 A B2047 56.859 121.816 81.829 1.00 45.93 C
ATOM 16 N7 A B2047 56.099 121.046 81.086 1.00 45.57 N
ATOM 17 C5 A B2047 56.169 119.807 81.709 1.00 44.13 C
ATOM 18 C6 A B2047 55.612 118.562 81.398 1.00 43.23 C
ATOM 19 N6 A B2047 54.875 118.330 80.314 1.00 43.23 N
ATOM 20 N1 A B2047 55.858 117.539 82.237 1.00 43.68 N
ATOM 21 C2 A B2047 56.636 117.753 83.299 1.00 43.17 C
ATOM 22 N3 A B2047 57.240 118.866 83.684 1.00 43.83 N
ATOM 23 C4 A B2047 56.964 119.872 82.836 1.00 44.71 C
ATOM 24 P G B2048 62.422 121.550 85.614 1.00 50.05 P
ATOM 25 OP1 G B2048 63.138 122.844 85.744 1.00 52.95 O
ATOM 26 OP2 G B2048 62.858 120.577 84.572 1.00 48.57 O
ATOM 27 O5' G B2048 62.458 120.807 87.022 1.00 48.32 O
TER
Atoms:
OP1: (58.471,117.467,88.705)
OP2: (60.482,118.695,87.708)
C3': (56.879,122.112,88.875)
C1': (56.103,121.669,86.671)
C5': (59.182,121.145,88.421)
O6: (52.790,117.570,83.824)
O4': (57.463,121.312,86.768)
C8: (55.361,119.242,86.820)
C2: (53.410,121.036,83.338)
C6: (53.256,118.691,84.046)
C5: (54.103,119.100,85.106)
C4: (54.508,120.416,85.161)
P: (59.476,118.551,88.781)
C4': (58.044,121.979,87.906)
C2': (55.698,122.412,87.950)
O2': (55.584,123.787,87.643)
N1: (52.959,119.748,83.191)
N2: (53.007,121.916,82.415)
N3: (54.198,121.431,84.319)
N7: (54.642,118.373,86.160)
N9: (55.346,120.494,86.254)
O5': (58.668,119.910,88.923)
O3': (57.151,123.196,89.766)
OP2: (60.482,118.695,87.708)
C3': (56.879,122.112,88.875)
C1': (56.103,121.669,86.671)
C5': (59.182,121.145,88.421)
O6: (52.790,117.570,83.824)
O4': (57.463,121.312,86.768)
C8: (55.361,119.242,86.820)
C2: (53.410,121.036,83.338)
C6: (53.256,118.691,84.046)
C5: (54.103,119.100,85.106)
C4: (54.508,120.416,85.161)
P: (59.476,118.551,88.781)
C4': (58.044,121.979,87.906)
C2': (55.698,122.412,87.950)
O2': (55.584,123.787,87.643)
N1: (52.959,119.748,83.191)
N2: (53.007,121.916,82.415)
N3: (54.198,121.431,84.319)
N7: (54.642,118.373,86.160)
N9: (55.346,120.494,86.254)
O5': (58.668,119.910,88.923)
O3': (57.151,123.196,89.766)
OP1: (58.593,127.591,82.574)
OP2: (57.446,128.152,84.794)
C3': (60.483,122.684,84.253)
C1': (58.427,121.649,83.848)
C5': (59.439,124.985,83.890)
O4': (58.117,122.967,84.249)
C8: (56.859,121.816,81.829)
O2': (60.443,120.513,83.081)
C6: (55.612,118.562,81.398)
C5: (56.169,119.807,81.709)
C4: (56.964,119.872,82.836)
P: (58.534,127.469,84.051)
C4': (59.357,123.656,84.610)
C2': (59.817,121.770,83.238)
C2: (56.636,117.753,83.299)
N1: (55.858,117.539,82.237)
N3: (57.240,118.866,83.684)
N6: (54.875,118.330,80.314)
N7: (56.099,121.046,81.086)
N9: (57.443,121.162,82.884)
O5': (58.482,125.920,84.434)
O3': (60.870,121.913,85.393)
OP2: (57.446,128.152,84.794)
C3': (60.483,122.684,84.253)
C1': (58.427,121.649,83.848)
C5': (59.439,124.985,83.890)
O4': (58.117,122.967,84.249)
C8: (56.859,121.816,81.829)
O2': (60.443,120.513,83.081)
C6: (55.612,118.562,81.398)
C5: (56.169,119.807,81.709)
C4: (56.964,119.872,82.836)
P: (58.534,127.469,84.051)
C4': (59.357,123.656,84.610)
C2': (59.817,121.770,83.238)
C2: (56.636,117.753,83.299)
N1: (55.858,117.539,82.237)
N3: (57.240,118.866,83.684)
N6: (54.875,118.330,80.314)
N7: (56.099,121.046,81.086)
N9: (57.443,121.162,82.884)
O5': (58.482,125.920,84.434)
O3': (60.870,121.913,85.393)
Image (generated by PyMOL):