Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1152:1154
Extra
PDB:
ATOM 1 O3' U A 151 58.717 -51.620 134.985 1.00 59.88 O
ATOM 2 P G A 152 59.331 -51.292 133.538 1.00 54.49 P
ATOM 3 OP1 G A 152 60.783 -51.071 133.734 1.00 54.73 O
ATOM 4 OP2 G A 152 58.511 -50.210 132.934 1.00 53.85 O
ATOM 5 O5' G A 152 59.084 -52.642 132.721 1.00 54.45 O
ATOM 6 C5' G A 152 59.872 -53.798 132.967 1.00 54.97 C
ATOM 7 C4' G A 152 59.041 -55.058 132.947 1.00 55.18 C
ATOM 8 O4' G A 152 58.218 -55.149 134.167 1.00 55.61 O
ATOM 9 C3' G A 152 58.072 -55.163 131.779 1.00 54.59 C
ATOM 10 O3' G A 152 58.022 -56.505 131.317 1.00 54.76 O
ATOM 11 C2' G A 152 56.739 -54.806 132.424 1.00 54.58 C
ATOM 12 O2' G A 152 55.615 -55.294 131.747 1.00 54.29 O
ATOM 13 C1' G A 152 56.889 -55.435 133.792 1.00 55.35 C
ATOM 14 N9 G A 152 55.975 -54.891 134.792 1.00 55.51 N
ATOM 15 C8 G A 152 55.837 -53.561 135.071 1.00 55.26 C
ATOM 16 N7 G A 152 54.925 -53.333 135.973 1.00 55.48 N
ATOM 17 C5 G A 152 54.410 -54.580 136.295 1.00 55.89 C
ATOM 18 C6 G A 152 53.392 -54.939 137.219 1.00 56.27 C
ATOM 19 O6 G A 152 52.719 -54.205 137.957 1.00 56.33 O
ATOM 20 N1 G A 152 53.168 -56.310 137.262 1.00 56.64 N
ATOM 21 C2 G A 152 53.839 -57.223 136.513 1.00 56.65 C
ATOM 22 N2 G A 152 53.461 -58.485 136.723 1.00 57.06 N
ATOM 23 N3 G A 152 54.799 -56.897 135.643 1.00 56.29 N
ATOM 24 C4 G A 152 55.042 -55.561 135.575 1.00 55.92 C
ATOM 25 P G A 153 58.952 -56.984 130.103 1.00 57.72 P
ATOM 26 OP1 G A 153 58.984 -55.893 129.100 1.00 57.01 O
ATOM 27 OP2 G A 153 58.471 -58.318 129.682 1.00 57.87 O
ATOM 28 O5' G A 153 60.363 -57.117 130.785 1.00 58.24 O
TER
ATOM 1 O3' G B 153 64.008 -58.011 132.776 1.00 59.90 O
ATOM 2 P A B 154 64.093 -59.525 133.357 1.00 67.06 P
ATOM 3 OP1 A B 154 65.394 -59.637 134.097 1.00 67.63 O
ATOM 4 OP2 A B 154 63.838 -60.453 132.217 1.00 66.81 O
ATOM 5 O5' A B 154 62.864 -59.599 134.381 1.00 67.32 O
ATOM 6 C5' A B 154 62.960 -59.086 135.697 1.00 67.75 C
ATOM 7 C4' A B 154 62.379 -57.718 135.763 1.00 67.29 C
ATOM 8 O4' A B 154 60.994 -57.747 135.367 1.00 66.90 O
ATOM 9 C3' A B 154 62.336 -57.051 137.111 1.00 67.69 C
ATOM 10 O3' A B 154 63.585 -56.549 137.498 1.00 67.93 O
ATOM 11 C2' A B 154 61.337 -55.952 136.837 1.00 67.10 C
ATOM 12 O2' A B 154 61.926 -54.992 135.961 1.00 66.53 O
ATOM 13 C1' A B 154 60.302 -56.716 136.040 1.00 66.80 C
ATOM 14 N9 A B 154 59.288 -57.332 136.894 1.00 67.21 N
ATOM 15 C8 A B 154 59.210 -58.679 137.075 1.00 67.67 C
ATOM 16 N7 A B 154 58.212 -59.063 137.822 1.00 67.97 N
ATOM 17 C5 A B 154 57.561 -57.880 138.148 1.00 67.68 C
ATOM 18 C6 A B 154 56.415 -57.647 138.936 1.00 67.82 C
ATOM 19 N6 A B 154 55.752 -58.644 139.524 1.00 68.29 N
ATOM 20 N1 A B 154 55.980 -56.385 139.093 1.00 67.47 N
ATOM 21 C2 A B 154 56.701 -55.454 138.459 1.00 67.02 C
ATOM 22 N3 A B 154 57.810 -55.534 137.691 1.00 66.85 N
ATOM 23 C4 A B 154 58.211 -56.802 137.571 1.00 67.20 C
ATOM 24 P G B 155 64.282 -57.057 138.841 1.00 61.64 P
ATOM 25 OP1 G B 155 65.443 -56.146 139.101 1.00 61.70 O
ATOM 26 OP2 G B 155 64.551 -58.508 138.676 1.00 62.03 O
ATOM 27 O5' G B 155 63.134 -56.827 139.930 1.00 61.89 O
TER
ATOM 2 P G A 152 59.331 -51.292 133.538 1.00 54.49 P
ATOM 3 OP1 G A 152 60.783 -51.071 133.734 1.00 54.73 O
ATOM 4 OP2 G A 152 58.511 -50.210 132.934 1.00 53.85 O
ATOM 5 O5' G A 152 59.084 -52.642 132.721 1.00 54.45 O
ATOM 6 C5' G A 152 59.872 -53.798 132.967 1.00 54.97 C
ATOM 7 C4' G A 152 59.041 -55.058 132.947 1.00 55.18 C
ATOM 8 O4' G A 152 58.218 -55.149 134.167 1.00 55.61 O
ATOM 9 C3' G A 152 58.072 -55.163 131.779 1.00 54.59 C
ATOM 10 O3' G A 152 58.022 -56.505 131.317 1.00 54.76 O
ATOM 11 C2' G A 152 56.739 -54.806 132.424 1.00 54.58 C
ATOM 12 O2' G A 152 55.615 -55.294 131.747 1.00 54.29 O
ATOM 13 C1' G A 152 56.889 -55.435 133.792 1.00 55.35 C
ATOM 14 N9 G A 152 55.975 -54.891 134.792 1.00 55.51 N
ATOM 15 C8 G A 152 55.837 -53.561 135.071 1.00 55.26 C
ATOM 16 N7 G A 152 54.925 -53.333 135.973 1.00 55.48 N
ATOM 17 C5 G A 152 54.410 -54.580 136.295 1.00 55.89 C
ATOM 18 C6 G A 152 53.392 -54.939 137.219 1.00 56.27 C
ATOM 19 O6 G A 152 52.719 -54.205 137.957 1.00 56.33 O
ATOM 20 N1 G A 152 53.168 -56.310 137.262 1.00 56.64 N
ATOM 21 C2 G A 152 53.839 -57.223 136.513 1.00 56.65 C
ATOM 22 N2 G A 152 53.461 -58.485 136.723 1.00 57.06 N
ATOM 23 N3 G A 152 54.799 -56.897 135.643 1.00 56.29 N
ATOM 24 C4 G A 152 55.042 -55.561 135.575 1.00 55.92 C
ATOM 25 P G A 153 58.952 -56.984 130.103 1.00 57.72 P
ATOM 26 OP1 G A 153 58.984 -55.893 129.100 1.00 57.01 O
ATOM 27 OP2 G A 153 58.471 -58.318 129.682 1.00 57.87 O
ATOM 28 O5' G A 153 60.363 -57.117 130.785 1.00 58.24 O
TER
ATOM 1 O3' G B 153 64.008 -58.011 132.776 1.00 59.90 O
ATOM 2 P A B 154 64.093 -59.525 133.357 1.00 67.06 P
ATOM 3 OP1 A B 154 65.394 -59.637 134.097 1.00 67.63 O
ATOM 4 OP2 A B 154 63.838 -60.453 132.217 1.00 66.81 O
ATOM 5 O5' A B 154 62.864 -59.599 134.381 1.00 67.32 O
ATOM 6 C5' A B 154 62.960 -59.086 135.697 1.00 67.75 C
ATOM 7 C4' A B 154 62.379 -57.718 135.763 1.00 67.29 C
ATOM 8 O4' A B 154 60.994 -57.747 135.367 1.00 66.90 O
ATOM 9 C3' A B 154 62.336 -57.051 137.111 1.00 67.69 C
ATOM 10 O3' A B 154 63.585 -56.549 137.498 1.00 67.93 O
ATOM 11 C2' A B 154 61.337 -55.952 136.837 1.00 67.10 C
ATOM 12 O2' A B 154 61.926 -54.992 135.961 1.00 66.53 O
ATOM 13 C1' A B 154 60.302 -56.716 136.040 1.00 66.80 C
ATOM 14 N9 A B 154 59.288 -57.332 136.894 1.00 67.21 N
ATOM 15 C8 A B 154 59.210 -58.679 137.075 1.00 67.67 C
ATOM 16 N7 A B 154 58.212 -59.063 137.822 1.00 67.97 N
ATOM 17 C5 A B 154 57.561 -57.880 138.148 1.00 67.68 C
ATOM 18 C6 A B 154 56.415 -57.647 138.936 1.00 67.82 C
ATOM 19 N6 A B 154 55.752 -58.644 139.524 1.00 68.29 N
ATOM 20 N1 A B 154 55.980 -56.385 139.093 1.00 67.47 N
ATOM 21 C2 A B 154 56.701 -55.454 138.459 1.00 67.02 C
ATOM 22 N3 A B 154 57.810 -55.534 137.691 1.00 66.85 N
ATOM 23 C4 A B 154 58.211 -56.802 137.571 1.00 67.20 C
ATOM 24 P G B 155 64.282 -57.057 138.841 1.00 61.64 P
ATOM 25 OP1 G B 155 65.443 -56.146 139.101 1.00 61.70 O
ATOM 26 OP2 G B 155 64.551 -58.508 138.676 1.00 62.03 O
ATOM 27 O5' G B 155 63.134 -56.827 139.930 1.00 61.89 O
TER
Atoms:
OP1: (60.783,-51.071,133.734)
OP2: (58.511,-50.210,132.934)
C3': (58.072,-55.163,131.779)
C1': (56.889,-55.435,133.792)
C5': (59.872,-53.798,132.967)
O6: (52.719,-54.205,137.957)
O4': (58.218,-55.149,134.167)
C8: (55.837,-53.561,135.071)
C2: (53.839,-57.223,136.513)
C6: (53.392,-54.939,137.219)
C5: (54.410,-54.580,136.295)
C4: (55.042,-55.561,135.575)
P: (59.331,-51.292,133.538)
C4': (59.041,-55.058,132.947)
C2': (56.739,-54.806,132.424)
O2': (55.615,-55.294,131.747)
N1: (53.168,-56.310,137.262)
N2: (53.461,-58.485,136.723)
N3: (54.799,-56.897,135.643)
N7: (54.925,-53.333,135.973)
N9: (55.975,-54.891,134.792)
O5': (59.084,-52.642,132.721)
O3': (58.022,-56.505,131.317)
OP2: (58.511,-50.210,132.934)
C3': (58.072,-55.163,131.779)
C1': (56.889,-55.435,133.792)
C5': (59.872,-53.798,132.967)
O6: (52.719,-54.205,137.957)
O4': (58.218,-55.149,134.167)
C8: (55.837,-53.561,135.071)
C2: (53.839,-57.223,136.513)
C6: (53.392,-54.939,137.219)
C5: (54.410,-54.580,136.295)
C4: (55.042,-55.561,135.575)
P: (59.331,-51.292,133.538)
C4': (59.041,-55.058,132.947)
C2': (56.739,-54.806,132.424)
O2': (55.615,-55.294,131.747)
N1: (53.168,-56.310,137.262)
N2: (53.461,-58.485,136.723)
N3: (54.799,-56.897,135.643)
N7: (54.925,-53.333,135.973)
N9: (55.975,-54.891,134.792)
O5': (59.084,-52.642,132.721)
O3': (58.022,-56.505,131.317)
OP1: (65.394,-59.637,134.097)
OP2: (63.838,-60.453,132.217)
C3': (62.336,-57.051,137.111)
C1': (60.302,-56.716,136.040)
C5': (62.960,-59.086,135.697)
O4': (60.994,-57.747,135.367)
C8: (59.210,-58.679,137.075)
O2': (61.926,-54.992,135.961)
C6: (56.415,-57.647,138.936)
C5: (57.561,-57.880,138.148)
C4: (58.211,-56.802,137.571)
P: (64.093,-59.525,133.357)
C4': (62.379,-57.718,135.763)
C2': (61.337,-55.952,136.837)
C2: (56.701,-55.454,138.459)
N1: (55.980,-56.385,139.093)
N3: (57.810,-55.534,137.691)
N6: (55.752,-58.644,139.524)
N7: (58.212,-59.063,137.822)
N9: (59.288,-57.332,136.894)
O5': (62.864,-59.599,134.381)
O3': (63.585,-56.549,137.498)
OP2: (63.838,-60.453,132.217)
C3': (62.336,-57.051,137.111)
C1': (60.302,-56.716,136.040)
C5': (62.960,-59.086,135.697)
O4': (60.994,-57.747,135.367)
C8: (59.210,-58.679,137.075)
O2': (61.926,-54.992,135.961)
C6: (56.415,-57.647,138.936)
C5: (57.561,-57.880,138.148)
C4: (58.211,-56.802,137.571)
P: (64.093,-59.525,133.357)
C4': (62.379,-57.718,135.763)
C2': (61.337,-55.952,136.837)
C2: (56.701,-55.454,138.459)
N1: (55.980,-56.385,139.093)
N3: (57.810,-55.534,137.691)
N6: (55.752,-58.644,139.524)
N7: (58.212,-59.063,137.822)
N9: (59.288,-57.332,136.894)
O5': (62.864,-59.599,134.381)
O3': (63.585,-56.549,137.498)
Image (generated by PyMOL):