ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:X10:X145

Extra

PDB:
ATOM 1 O3' U A 9 35.610 17.725 25.253 1.00 20.66 O
ATOM 2 P A A 10 37.065 18.300 25.677 1.00 20.00 P
ATOM 3 OP1 A A 10 36.943 19.717 26.096 1.00 19.66 O
ATOM 4 OP2 A A 10 37.998 17.934 24.588 1.00 22.14 O
ATOM 5 O5' A A 10 37.319 17.440 26.984 1.00 22.91 O
ATOM 6 C5' A A 10 37.652 16.059 26.925 1.00 21.71 C
ATOM 7 C4' A A 10 38.114 15.597 28.281 1.00 24.89 C
ATOM 8 O4' A A 10 39.186 16.465 28.752 1.00 26.74 O
ATOM 9 C3' A A 10 37.076 15.694 29.386 1.00 23.65 C
ATOM 10 O3' A A 10 36.142 14.631 29.362 1.00 26.38 O
ATOM 11 C2' A A 10 37.962 15.719 30.626 1.00 28.00 C
ATOM 12 O2' A A 10 38.544 14.444 30.850 1.00 29.28 O
ATOM 13 C1' A A 10 39.067 16.661 30.149 1.00 27.56 C
ATOM 14 N9 A A 10 38.645 18.043 30.417 1.00 26.37 N
ATOM 15 C8 A A 10 38.134 18.962 29.528 1.00 26.81 C
ATOM 16 N7 A A 10 37.817 20.098 30.092 1.00 29.05 N
ATOM 17 C5 A A 10 38.102 19.918 31.438 1.00 27.99 C
ATOM 18 C6 A A 10 37.984 20.765 32.564 1.00 29.92 C
ATOM 19 N6 A A 10 37.525 22.016 32.536 1.00 28.04 N
ATOM 20 N1 A A 10 38.380 20.268 33.757 1.00 31.33 N
ATOM 21 C2 A A 10 38.856 19.020 33.799 1.00 27.81 C
ATOM 22 N3 A A 10 39.018 18.132 32.821 1.00 30.31 N
ATOM 23 C4 A A 10 38.618 18.654 31.646 1.00 28.40 C
ATOM 24 P G A 11 34.560 14.909 29.437 1.00 27.69 P
ATOM 25 OP1 G A 11 33.921 13.584 29.581 1.00 27.61 O
ATOM 26 OP2 G A 11 34.218 15.758 28.267 1.00 29.76 O
ATOM 27 O5' G A 11 34.413 15.780 30.753 1.00 25.20 O
TER

ATOM 1 O3' U B 144 34.415 30.835 32.426 1.00 31.15 O
ATOM 2 P C B 145 35.983 30.950 32.070 1.00 36.30 P
ATOM 3 OP1 C B 145 36.438 32.013 33.009 1.00 38.25 O
ATOM 4 OP2 C B 145 36.139 31.172 30.607 1.00 27.97 O
ATOM 5 O5' C B 145 36.599 29.540 32.477 1.00 33.57 O
ATOM 6 C5' C B 145 36.501 29.021 33.793 1.00 30.31 C
ATOM 7 C4' C B 145 36.803 27.545 33.796 1.00 33.38 C
ATOM 8 O4' C B 145 35.796 26.852 33.015 1.00 32.12 O
ATOM 9 C3' C B 145 38.124 27.140 33.156 1.00 32.55 C
ATOM 10 O3' C B 145 39.231 27.258 34.038 1.00 37.98 O
ATOM 11 C2' C B 145 37.862 25.708 32.724 1.00 32.77 C
ATOM 12 O2' C B 145 38.003 24.827 33.831 1.00 33.61 O
ATOM 13 C1' C B 145 36.386 25.773 32.320 1.00 29.78 C
ATOM 14 N1 C B 145 36.253 25.967 30.856 1.00 27.43 N
ATOM 15 C2 C B 145 36.307 24.824 30.072 1.00 26.44 C
ATOM 16 O2 C B 145 36.452 23.759 30.667 1.00 29.56 O
ATOM 17 N3 C B 145 36.198 24.915 28.726 1.00 28.61 N
ATOM 18 C4 C B 145 36.036 26.112 28.158 1.00 27.17 C
ATOM 19 N4 C B 145 35.939 26.180 26.827 1.00 26.37 N
ATOM 20 C5 C B 145 35.974 27.300 28.941 1.00 28.85 C
ATOM 21 C6 C B 145 36.088 27.182 30.274 1.00 26.98 C
ATOM 22 P U B 146 40.760 27.250 33.518 1.00 38.38 P
ATOM 23 OP1 U B 146 41.558 27.737 34.678 1.00 41.67 O
ATOM 24 OP2 U B 146 40.808 27.952 32.220 1.00 34.03 O
ATOM 25 O5' U B 146 41.085 25.711 33.281 1.00 31.41 O
TER

Atoms:
OP1: (36.943,19.717,26.096)
OP2: (37.998,17.934,24.588)
C3': (37.076,15.694,29.386)
C1': (39.067,16.661,30.149)
C5': (37.652,16.059,26.925)
O4': (39.186,16.465,28.752)
C8: (38.134,18.962,29.528)
O2': (38.544,14.444,30.850)
C6: (37.984,20.765,32.564)
C5: (38.102,19.918,31.438)
C4: (38.618,18.654,31.646)
P: (37.065,18.300,25.677)
C4': (38.114,15.597,28.281)
C2': (37.962,15.719,30.626)
C2: (38.856,19.020,33.799)
N1: (38.380,20.268,33.757)
N3: (39.018,18.132,32.821)
N6: (37.525,22.016,32.536)
N7: (37.817,20.098,30.092)
N9: (38.645,18.043,30.417)
O5': (37.319,17.440,26.984)
O3': (36.142,14.631,29.362)
C2: (36.307,24.824,30.072)
OP1: (36.438,32.013,33.009)
OP2: (36.139,31.172,30.607)
C4: (36.036,26.112,28.158)
O5': (36.599,29.540,32.477)
C3': (38.124,27.140,33.156)
C1': (36.386,25.773,32.320)
O4': (35.796,26.852,33.015)
C5': (36.501,29.021,33.793)
P: (35.983,30.950,32.070)
O2: (36.452,23.759,30.667)
C4': (36.803,27.545,33.796)
C2': (37.862,25.708,32.724)
O2': (38.003,24.827,33.831)
N1: (36.253,25.967,30.856)
N3: (36.198,24.915,28.726)
N4: (35.939,26.180,26.827)
C6: (36.088,27.182,30.274)
C5: (35.974,27.300,28.941)
O3': (39.231,27.258,34.038)
Image (generated by PyMOL):
PyMOL image
show in jmol