ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FOZ:D14:D54

Extra

PDB:
ATOM 1 O3' C A 13 -5.824 77.763 9.995 1.00 28.48 O
ATOM 2 P G A 14 -4.716 78.478 9.095 1.00 27.37 P
ATOM 3 OP1 G A 14 -5.036 79.922 9.008 1.00 30.41 O
ATOM 4 OP2 G A 14 -4.590 77.666 7.869 1.00 20.28 O
ATOM 5 O5' G A 14 -3.369 78.370 9.944 1.00 31.50 O
ATOM 6 C5' G A 14 -2.695 77.140 10.141 1.00 32.39 C
ATOM 7 C4' G A 14 -1.207 77.381 10.300 1.00 32.75 C
ATOM 8 O4' G A 14 -0.675 77.864 9.038 1.00 31.63 O
ATOM 9 C3' G A 14 -0.817 78.433 11.340 1.00 31.82 C
ATOM 10 O3' G A 14 0.457 78.146 11.918 1.00 30.27 O
ATOM 11 C2' G A 14 -0.711 79.684 10.493 1.00 33.25 C
ATOM 12 O2' G A 14 0.036 80.718 11.106 1.00 41.73 O
ATOM 13 C1' G A 14 0.010 79.075 9.291 1.00 31.43 C
ATOM 14 N9 G A 14 0.026 79.944 8.125 1.00 26.25 N
ATOM 15 C8 G A 14 -0.990 80.740 7.662 1.00 30.93 C
ATOM 16 N7 G A 14 -0.671 81.427 6.602 1.00 29.94 N
ATOM 17 C5 G A 14 0.642 81.069 6.353 1.00 29.86 C
ATOM 18 C6 G A 14 1.520 81.490 5.330 1.00 34.26 C
ATOM 19 O6 G A 14 1.284 82.294 4.420 1.00 38.28 O
ATOM 20 N1 G A 14 2.772 80.874 5.430 1.00 36.93 N
ATOM 21 C2 G A 14 3.126 79.965 6.406 1.00 30.16 C
ATOM 22 N2 G A 14 4.371 79.474 6.357 1.00 28.39 N
ATOM 23 N3 G A 14 2.307 79.570 7.368 1.00 25.33 N
ATOM 24 C4 G A 14 1.086 80.154 7.280 1.00 28.05 C
ATOM 25 P G A 15 0.594 77.437 13.334 1.00 27.68 P
ATOM 26 OP1 G A 15 0.531 75.978 13.100 1.00 35.79 O
ATOM 27 OP2 G A 15 -0.351 78.089 14.266 1.00 25.33 O
ATOM 28 O5' G A 15 2.067 77.834 13.789 1.00 30.19 O
TER

ATOM 1 O3' G B 53 8.753 79.290 6.594 1.00 36.60 O
ATOM 2 P A B 54 8.335 78.313 5.399 1.00 31.77 P
ATOM 3 OP1 A B 54 9.571 78.066 4.631 1.00 38.21 O
ATOM 4 OP2 A B 54 7.104 78.755 4.720 1.00 28.75 O
ATOM 5 O5' A B 54 7.962 76.981 6.197 1.00 41.61 O
ATOM 6 C5' A B 54 6.949 76.974 7.191 1.00 35.92 C
ATOM 7 C4' A B 54 5.837 76.004 6.848 1.00 37.23 C
ATOM 8 O4' A B 54 4.672 76.766 6.438 1.00 39.47 O
ATOM 9 C3' A B 54 6.129 75.008 5.715 1.00 37.98 C
ATOM 10 O3' A B 54 6.008 73.648 6.159 1.00 39.52 O
ATOM 11 C2' A B 54 5.109 75.377 4.643 1.00 37.08 C
ATOM 12 O2' A B 54 4.632 74.274 3.908 1.00 35.20 O
ATOM 13 C1' A B 54 3.990 76.011 5.467 1.00 37.82 C
ATOM 14 N9 A B 54 3.094 76.886 4.719 1.00 38.01 N
ATOM 15 C8 A B 54 3.372 77.575 3.575 1.00 34.61 C
ATOM 16 N7 A B 54 2.365 78.273 3.116 1.00 38.83 N
ATOM 17 C5 A B 54 1.352 78.034 4.022 1.00 36.03 C
ATOM 18 C6 A B 54 0.021 78.496 4.098 1.00 33.18 C
ATOM 19 N6 A B 54 -0.520 79.328 3.204 1.00 25.06 N
ATOM 20 N1 A B 54 -0.735 78.069 5.130 1.00 34.23 N
ATOM 21 C2 A B 54 -0.178 77.233 6.018 1.00 41.82 C
ATOM 22 N3 A B 54 1.063 76.732 6.055 1.00 38.08 N
ATOM 23 C4 A B 54 1.785 77.177 5.016 1.00 36.57 C
ATOM 24 P U B 55 7.337 72.777 6.360 1.00 41.14 P
ATOM 25 OP1 U B 55 8.035 73.288 7.560 1.00 34.96 O
ATOM 26 OP2 U B 55 8.057 72.741 5.064 1.00 37.34 O
ATOM 27 O5' U B 55 6.755 71.323 6.701 1.00 40.80 O
TER

Atoms:
OP1: (-5.036,79.922,9.008)
OP2: (-4.590,77.666,7.869)
C3': (-0.817,78.433,11.340)
C1': (0.010,79.075,9.291)
C5': (-2.695,77.140,10.141)
O6: (1.284,82.294,4.420)
O4': (-0.675,77.864,9.038)
C8: (-0.990,80.740,7.662)
C2: (3.126,79.965,6.406)
C6: (1.520,81.490,5.330)
C5: (0.642,81.069,6.353)
C4: (1.086,80.154,7.280)
P: (-4.716,78.478,9.095)
C4': (-1.207,77.381,10.300)
C2': (-0.711,79.684,10.493)
O2': (0.036,80.718,11.106)
N1: (2.772,80.874,5.430)
N2: (4.371,79.474,6.357)
N3: (2.307,79.570,7.368)
N7: (-0.671,81.427,6.602)
N9: (0.026,79.944,8.125)
O5': (-3.369,78.370,9.944)
O3': (0.457,78.146,11.918)
OP1: (9.571,78.066,4.631)
OP2: (7.104,78.755,4.720)
C3': (6.129,75.008,5.715)
C1': (3.990,76.011,5.467)
C5': (6.949,76.974,7.191)
O4': (4.672,76.766,6.438)
C8: (3.372,77.575,3.575)
O2': (4.632,74.274,3.908)
C6: (0.021,78.496,4.098)
C5: (1.352,78.034,4.022)
C4: (1.785,77.177,5.016)
P: (8.335,78.313,5.399)
C4': (5.837,76.004,6.848)
C2': (5.109,75.377,4.643)
C2: (-0.178,77.233,6.018)
N1: (-0.735,78.069,5.130)
N3: (1.063,76.732,6.055)
N6: (-0.520,79.328,3.204)
N7: (2.365,78.273,3.116)
N9: (3.094,76.886,4.719)
O5': (7.962,76.981,6.197)
O3': (6.008,73.648,6.159)
Image (generated by PyMOL):
PyMOL image
show in jmol