Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A53:A67
Extra
PDB:
ATOM 1 O3' U A 52 19.576 -72.946 -49.737 1.00 52.77 O
ATOM 2 P G A 53 18.901 -73.918 -48.631 1.00 57.94 P
ATOM 3 OP1 G A 53 17.471 -74.076 -49.021 1.00 44.91 O
ATOM 4 OP2 G A 53 19.242 -73.349 -47.286 1.00 54.44 O
ATOM 5 O5' G A 53 19.589 -75.351 -48.839 1.00 46.16 O
ATOM 6 C5' G A 53 19.459 -76.022 -50.091 1.00 48.13 C
ATOM 7 C4' G A 53 19.800 -77.492 -49.988 1.00 52.89 C
ATOM 8 O4' G A 53 21.208 -77.703 -49.737 1.00 58.50 O
ATOM 9 C3' G A 53 19.024 -78.364 -49.011 1.00 59.31 C
ATOM 10 O3' G A 53 18.517 -79.495 -49.709 1.00 62.73 O
ATOM 11 C2' G A 53 20.090 -78.758 -47.986 1.00 58.89 C
ATOM 12 O2' G A 53 19.880 -80.040 -47.449 1.00 61.47 O
ATOM 13 C1' G A 53 21.364 -78.764 -48.827 1.00 63.54 C
ATOM 14 N9 G A 53 22.603 -78.560 -48.073 1.00 61.95 N
ATOM 15 C8 G A 53 22.775 -77.777 -46.955 1.00 60.98 C
ATOM 16 N7 G A 53 23.999 -77.796 -46.499 1.00 64.29 N
ATOM 17 C5 G A 53 24.683 -78.630 -47.372 1.00 63.86 C
ATOM 18 C6 G A 53 26.046 -79.030 -47.381 1.00 66.36 C
ATOM 19 O6 G A 53 26.950 -78.712 -46.607 1.00 70.73 O
ATOM 20 N1 G A 53 26.317 -79.892 -48.434 1.00 65.87 N
ATOM 21 C2 G A 53 25.401 -80.309 -49.364 1.00 67.37 C
ATOM 22 N2 G A 53 25.863 -81.118 -50.318 1.00 69.10 N
ATOM 23 N3 G A 53 24.127 -79.954 -49.365 1.00 64.96 N
ATOM 24 C4 G A 53 23.838 -79.115 -48.348 1.00 62.76 C
ATOM 25 P G A 54 16.959 -79.535 -50.125 1.00 70.05 P
ATOM 26 OP1 G A 54 16.737 -80.631 -51.099 1.00 70.62 O
ATOM 27 OP2 G A 54 16.540 -78.144 -50.485 1.00 63.80 O
ATOM 28 O5' G A 54 16.217 -79.951 -48.785 1.00 69.00 O
TER
ATOM 1 O3' A B 66 22.637 -74.121 -55.792 1.00 55.90 O
ATOM 2 P A B 67 22.468 -75.468 -54.909 1.00 57.88 P
ATOM 3 OP1 A B 67 21.018 -75.729 -54.672 1.00 59.19 O
ATOM 4 OP2 A B 67 23.386 -75.396 -53.760 1.00 59.68 O
ATOM 5 O5' A B 67 22.982 -76.642 -55.841 1.00 56.65 O
ATOM 6 C5' A B 67 22.916 -77.977 -55.384 1.00 57.70 C
ATOM 7 C4' A B 67 24.245 -78.620 -55.569 1.00 60.13 C
ATOM 8 O4' A B 67 25.229 -77.931 -54.762 1.00 63.07 O
ATOM 9 C3' A B 67 24.350 -80.102 -55.251 1.00 62.85 C
ATOM 10 O3' A B 67 25.054 -80.708 -56.337 1.00 70.15 O
ATOM 11 C2' A B 67 25.137 -80.126 -53.930 1.00 67.46 C
ATOM 12 O2' A B 67 25.996 -81.245 -53.805 1.00 69.52 O
ATOM 13 C1' A B 67 25.996 -78.873 -54.048 1.00 69.47 C
ATOM 14 N9 A B 67 26.436 -78.262 -52.792 1.00 65.90 N
ATOM 15 C8 A B 67 27.724 -78.203 -52.319 1.00 63.77 C
ATOM 16 N7 A B 67 27.855 -77.488 -51.229 1.00 63.53 N
ATOM 17 C5 A B 67 26.564 -77.076 -50.946 1.00 66.50 C
ATOM 18 C6 A B 67 26.038 -76.266 -49.930 1.00 69.77 C
ATOM 19 N6 A B 67 26.781 -75.696 -48.974 1.00 67.81 N
ATOM 20 N1 A B 67 24.703 -76.048 -49.932 1.00 67.37 N
ATOM 21 C2 A B 67 23.964 -76.610 -50.897 1.00 66.23 C
ATOM 22 N3 A B 67 24.346 -77.382 -51.913 1.00 64.23 N
ATOM 23 C4 A B 67 25.674 -77.574 -51.881 1.00 64.68 C
ATOM 24 P G B 68 24.278 -80.998 -57.725 1.00 70.06 P
ATOM 25 OP1 G B 68 23.027 -81.728 -57.421 1.00 68.69 O
ATOM 26 OP2 G B 68 25.239 -81.557 -58.716 1.00 58.98 O
ATOM 27 O5' G B 68 23.844 -79.541 -58.204 1.00 61.49 O
TER
ATOM 2 P G A 53 18.901 -73.918 -48.631 1.00 57.94 P
ATOM 3 OP1 G A 53 17.471 -74.076 -49.021 1.00 44.91 O
ATOM 4 OP2 G A 53 19.242 -73.349 -47.286 1.00 54.44 O
ATOM 5 O5' G A 53 19.589 -75.351 -48.839 1.00 46.16 O
ATOM 6 C5' G A 53 19.459 -76.022 -50.091 1.00 48.13 C
ATOM 7 C4' G A 53 19.800 -77.492 -49.988 1.00 52.89 C
ATOM 8 O4' G A 53 21.208 -77.703 -49.737 1.00 58.50 O
ATOM 9 C3' G A 53 19.024 -78.364 -49.011 1.00 59.31 C
ATOM 10 O3' G A 53 18.517 -79.495 -49.709 1.00 62.73 O
ATOM 11 C2' G A 53 20.090 -78.758 -47.986 1.00 58.89 C
ATOM 12 O2' G A 53 19.880 -80.040 -47.449 1.00 61.47 O
ATOM 13 C1' G A 53 21.364 -78.764 -48.827 1.00 63.54 C
ATOM 14 N9 G A 53 22.603 -78.560 -48.073 1.00 61.95 N
ATOM 15 C8 G A 53 22.775 -77.777 -46.955 1.00 60.98 C
ATOM 16 N7 G A 53 23.999 -77.796 -46.499 1.00 64.29 N
ATOM 17 C5 G A 53 24.683 -78.630 -47.372 1.00 63.86 C
ATOM 18 C6 G A 53 26.046 -79.030 -47.381 1.00 66.36 C
ATOM 19 O6 G A 53 26.950 -78.712 -46.607 1.00 70.73 O
ATOM 20 N1 G A 53 26.317 -79.892 -48.434 1.00 65.87 N
ATOM 21 C2 G A 53 25.401 -80.309 -49.364 1.00 67.37 C
ATOM 22 N2 G A 53 25.863 -81.118 -50.318 1.00 69.10 N
ATOM 23 N3 G A 53 24.127 -79.954 -49.365 1.00 64.96 N
ATOM 24 C4 G A 53 23.838 -79.115 -48.348 1.00 62.76 C
ATOM 25 P G A 54 16.959 -79.535 -50.125 1.00 70.05 P
ATOM 26 OP1 G A 54 16.737 -80.631 -51.099 1.00 70.62 O
ATOM 27 OP2 G A 54 16.540 -78.144 -50.485 1.00 63.80 O
ATOM 28 O5' G A 54 16.217 -79.951 -48.785 1.00 69.00 O
TER
ATOM 1 O3' A B 66 22.637 -74.121 -55.792 1.00 55.90 O
ATOM 2 P A B 67 22.468 -75.468 -54.909 1.00 57.88 P
ATOM 3 OP1 A B 67 21.018 -75.729 -54.672 1.00 59.19 O
ATOM 4 OP2 A B 67 23.386 -75.396 -53.760 1.00 59.68 O
ATOM 5 O5' A B 67 22.982 -76.642 -55.841 1.00 56.65 O
ATOM 6 C5' A B 67 22.916 -77.977 -55.384 1.00 57.70 C
ATOM 7 C4' A B 67 24.245 -78.620 -55.569 1.00 60.13 C
ATOM 8 O4' A B 67 25.229 -77.931 -54.762 1.00 63.07 O
ATOM 9 C3' A B 67 24.350 -80.102 -55.251 1.00 62.85 C
ATOM 10 O3' A B 67 25.054 -80.708 -56.337 1.00 70.15 O
ATOM 11 C2' A B 67 25.137 -80.126 -53.930 1.00 67.46 C
ATOM 12 O2' A B 67 25.996 -81.245 -53.805 1.00 69.52 O
ATOM 13 C1' A B 67 25.996 -78.873 -54.048 1.00 69.47 C
ATOM 14 N9 A B 67 26.436 -78.262 -52.792 1.00 65.90 N
ATOM 15 C8 A B 67 27.724 -78.203 -52.319 1.00 63.77 C
ATOM 16 N7 A B 67 27.855 -77.488 -51.229 1.00 63.53 N
ATOM 17 C5 A B 67 26.564 -77.076 -50.946 1.00 66.50 C
ATOM 18 C6 A B 67 26.038 -76.266 -49.930 1.00 69.77 C
ATOM 19 N6 A B 67 26.781 -75.696 -48.974 1.00 67.81 N
ATOM 20 N1 A B 67 24.703 -76.048 -49.932 1.00 67.37 N
ATOM 21 C2 A B 67 23.964 -76.610 -50.897 1.00 66.23 C
ATOM 22 N3 A B 67 24.346 -77.382 -51.913 1.00 64.23 N
ATOM 23 C4 A B 67 25.674 -77.574 -51.881 1.00 64.68 C
ATOM 24 P G B 68 24.278 -80.998 -57.725 1.00 70.06 P
ATOM 25 OP1 G B 68 23.027 -81.728 -57.421 1.00 68.69 O
ATOM 26 OP2 G B 68 25.239 -81.557 -58.716 1.00 58.98 O
ATOM 27 O5' G B 68 23.844 -79.541 -58.204 1.00 61.49 O
TER
Atoms:
OP1: (17.471,-74.076,-49.021)
OP2: (19.242,-73.349,-47.286)
C3': (19.024,-78.364,-49.011)
C1': (21.364,-78.764,-48.827)
C5': (19.459,-76.022,-50.091)
O6: (26.950,-78.712,-46.607)
O4': (21.208,-77.703,-49.737)
C8: (22.775,-77.777,-46.955)
C2: (25.401,-80.309,-49.364)
C6: (26.046,-79.030,-47.381)
C5: (24.683,-78.630,-47.372)
C4: (23.838,-79.115,-48.348)
P: (18.901,-73.918,-48.631)
C4': (19.800,-77.492,-49.988)
C2': (20.090,-78.758,-47.986)
O2': (19.880,-80.040,-47.449)
N1: (26.317,-79.892,-48.434)
N2: (25.863,-81.118,-50.318)
N3: (24.127,-79.954,-49.365)
N7: (23.999,-77.796,-46.499)
N9: (22.603,-78.560,-48.073)
O5': (19.589,-75.351,-48.839)
O3': (18.517,-79.495,-49.709)
OP2: (19.242,-73.349,-47.286)
C3': (19.024,-78.364,-49.011)
C1': (21.364,-78.764,-48.827)
C5': (19.459,-76.022,-50.091)
O6: (26.950,-78.712,-46.607)
O4': (21.208,-77.703,-49.737)
C8: (22.775,-77.777,-46.955)
C2: (25.401,-80.309,-49.364)
C6: (26.046,-79.030,-47.381)
C5: (24.683,-78.630,-47.372)
C4: (23.838,-79.115,-48.348)
P: (18.901,-73.918,-48.631)
C4': (19.800,-77.492,-49.988)
C2': (20.090,-78.758,-47.986)
O2': (19.880,-80.040,-47.449)
N1: (26.317,-79.892,-48.434)
N2: (25.863,-81.118,-50.318)
N3: (24.127,-79.954,-49.365)
N7: (23.999,-77.796,-46.499)
N9: (22.603,-78.560,-48.073)
O5': (19.589,-75.351,-48.839)
O3': (18.517,-79.495,-49.709)
OP1: (21.018,-75.729,-54.672)
OP2: (23.386,-75.396,-53.760)
C3': (24.350,-80.102,-55.251)
C1': (25.996,-78.873,-54.048)
C5': (22.916,-77.977,-55.384)
O4': (25.229,-77.931,-54.762)
C8: (27.724,-78.203,-52.319)
O2': (25.996,-81.245,-53.805)
C6: (26.038,-76.266,-49.930)
C5: (26.564,-77.076,-50.946)
C4: (25.674,-77.574,-51.881)
P: (22.468,-75.468,-54.909)
C4': (24.245,-78.620,-55.569)
C2': (25.137,-80.126,-53.930)
C2: (23.964,-76.610,-50.897)
N1: (24.703,-76.048,-49.932)
N3: (24.346,-77.382,-51.913)
N6: (26.781,-75.696,-48.974)
N7: (27.855,-77.488,-51.229)
N9: (26.436,-78.262,-52.792)
O5': (22.982,-76.642,-55.841)
O3': (25.054,-80.708,-56.337)
OP2: (23.386,-75.396,-53.760)
C3': (24.350,-80.102,-55.251)
C1': (25.996,-78.873,-54.048)
C5': (22.916,-77.977,-55.384)
O4': (25.229,-77.931,-54.762)
C8: (27.724,-78.203,-52.319)
O2': (25.996,-81.245,-53.805)
C6: (26.038,-76.266,-49.930)
C5: (26.564,-77.076,-50.946)
C4: (25.674,-77.574,-51.881)
P: (22.468,-75.468,-54.909)
C4': (24.245,-78.620,-55.569)
C2': (25.137,-80.126,-53.930)
C2: (23.964,-76.610,-50.897)
N1: (24.703,-76.048,-49.932)
N3: (24.346,-77.382,-51.913)
N6: (26.781,-75.696,-48.974)
N7: (27.855,-77.488,-51.229)
N9: (26.436,-78.262,-52.792)
O5': (22.982,-76.642,-55.841)
O3': (25.054,-80.708,-56.337)
Image (generated by PyMOL):