ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1G59:B16:B56

Extra

PDB:
ATOM 1 O3' C A 15 4.572 73.535 39.886 1.00 74.08 O
ATOM 2 P G A 16 3.969 75.050 39.812 1.00 73.02 P
ATOM 3 OP1 G A 16 2.949 75.085 38.733 1.00 71.64 O
ATOM 4 OP2 G A 16 5.088 76.030 39.803 1.00 73.69 O
ATOM 5 O5' G A 16 3.179 75.161 41.245 1.00 70.28 O
ATOM 6 C5' G A 16 3.236 74.085 42.200 1.00 67.48 C
ATOM 7 C4' G A 16 1.865 73.466 42.469 1.00 65.57 C
ATOM 8 O4' G A 16 1.035 74.397 43.217 1.00 64.90 O
ATOM 9 C3' G A 16 1.137 73.163 41.149 1.00 67.51 C
ATOM 10 O3' G A 16 1.040 71.716 40.859 1.00 67.70 O
ATOM 11 C2' G A 16 -0.223 73.800 41.262 1.00 66.34 C
ATOM 12 O2' G A 16 -1.257 72.830 41.074 1.00 69.21 O
ATOM 13 C1' G A 16 -0.300 74.410 42.653 1.00 65.50 C
ATOM 14 N9 G A 16 -0.842 75.805 42.596 1.00 60.39 N
ATOM 15 C8 G A 16 -0.597 76.784 41.672 1.00 61.96 C
ATOM 16 N7 G A 16 -1.232 77.913 41.910 1.00 60.40 N
ATOM 17 C5 G A 16 -1.949 77.658 43.072 1.00 62.10 C
ATOM 18 C6 G A 16 -2.821 78.500 43.802 1.00 59.87 C
ATOM 19 O6 G A 16 -3.173 79.650 43.526 1.00 67.78 O
ATOM 20 N1 G A 16 -3.340 77.869 44.919 1.00 56.57 N
ATOM 21 C2 G A 16 -3.072 76.578 45.302 1.00 56.22 C
ATOM 22 N2 G A 16 -3.670 76.158 46.417 1.00 45.18 N
ATOM 23 N3 G A 16 -2.252 75.766 44.615 1.00 62.73 N
ATOM 24 C4 G A 16 -1.723 76.373 43.509 1.00 62.14 C
ATOM 25 P G A 17 0.754 70.523 42.002 1.00 67.04 P
ATOM 26 OP1 G A 17 1.765 70.661 43.094 1.00 66.11 O
ATOM 27 OP2 G A 17 0.621 69.233 41.281 1.00 69.97 O
ATOM 28 O5' G A 17 -0.732 70.858 42.632 1.00 72.04 O
TER

ATOM 1 O3' G B 55 -6.428 74.517 48.467 1.00 68.59 O
ATOM 2 P A B 56 -5.794 75.541 49.569 1.00 65.94 P
ATOM 3 OP1 A B 56 -6.270 75.126 50.916 1.00 62.44 O
ATOM 4 OP2 A B 56 -6.005 76.938 49.098 1.00 70.45 O
ATOM 5 O5' A B 56 -4.215 75.243 49.473 1.00 67.42 O
ATOM 6 C5' A B 56 -3.488 74.852 50.645 1.00 66.27 C
ATOM 7 C4' A B 56 -2.206 74.112 50.299 1.00 62.87 C
ATOM 8 O4' A B 56 -1.937 74.207 48.871 1.00 57.99 O
ATOM 9 C3' A B 56 -1.036 74.746 51.025 1.00 63.05 C
ATOM 10 O3' A B 56 -0.514 73.916 52.113 1.00 61.23 O
ATOM 11 C2' A B 56 -0.007 75.035 49.999 1.00 63.89 C
ATOM 12 O2' A B 56 1.100 74.121 50.081 1.00 74.50 O
ATOM 13 C1' A B 56 -0.690 74.909 48.669 1.00 63.15 C
ATOM 14 N9 A B 56 -0.938 76.250 48.148 1.00 66.26 N
ATOM 15 C8 A B 56 -1.762 77.239 48.652 1.00 67.57 C
ATOM 16 N7 A B 56 -1.752 78.343 47.948 1.00 65.42 N
ATOM 17 C5 A B 56 -0.860 78.063 46.909 1.00 65.67 C
ATOM 18 C6 A B 56 -0.408 78.819 45.820 1.00 65.30 C
ATOM 19 N6 A B 56 -0.806 80.064 45.588 1.00 71.72 N
ATOM 20 N1 A B 56 0.471 78.239 44.980 1.00 67.39 N
ATOM 21 C2 A B 56 0.867 76.984 45.223 1.00 68.90 C
ATOM 22 N3 A B 56 0.517 76.172 46.209 1.00 64.50 N
ATOM 23 C4 A B 56 -0.364 76.789 47.026 1.00 67.09 C
ATOM 24 P U B 57 -0.552 72.281 52.133 1.00 54.38 P
ATOM 25 OP1 U B 57 -1.133 71.789 50.859 1.00 52.31 O
ATOM 26 OP2 U B 57 -1.146 71.868 53.421 1.00 47.53 O
ATOM 27 O5' U B 57 1.028 71.877 52.149 1.00 50.72 O
TER

Atoms:
OP1: (2.949,75.085,38.733)
OP2: (5.088,76.030,39.803)
C3': (1.137,73.163,41.149)
C1': (-0.300,74.410,42.653)
C5': (3.236,74.085,42.200)
O6: (-3.173,79.650,43.526)
O4': (1.035,74.397,43.217)
C8: (-0.597,76.784,41.672)
C2: (-3.072,76.578,45.302)
C6: (-2.821,78.500,43.802)
C5: (-1.949,77.658,43.072)
C4: (-1.723,76.373,43.509)
P: (3.969,75.050,39.812)
C4': (1.865,73.466,42.469)
C2': (-0.223,73.800,41.262)
O2': (-1.257,72.830,41.074)
N1: (-3.340,77.869,44.919)
N2: (-3.670,76.158,46.417)
N3: (-2.252,75.766,44.615)
N7: (-1.232,77.913,41.910)
N9: (-0.842,75.805,42.596)
O5': (3.179,75.161,41.245)
O3': (1.040,71.716,40.859)
OP1: (-6.270,75.126,50.916)
OP2: (-6.005,76.938,49.098)
C3': (-1.036,74.746,51.025)
C1': (-0.690,74.909,48.669)
C5': (-3.488,74.852,50.645)
O4': (-1.937,74.207,48.871)
C8: (-1.762,77.239,48.652)
O2': (1.100,74.121,50.081)
C6: (-0.408,78.819,45.820)
C5: (-0.860,78.063,46.909)
C4: (-0.364,76.789,47.026)
P: (-5.794,75.541,49.569)
C4': (-2.206,74.112,50.299)
C2': (-0.007,75.035,49.999)
C2: (0.867,76.984,45.223)
N1: (0.471,78.239,44.980)
N3: (0.517,76.172,46.209)
N6: (-0.806,80.064,45.588)
N7: (-1.752,78.343,47.948)
N9: (-0.938,76.250,48.148)
O5': (-4.215,75.243,49.473)
O3': (-0.514,73.916,52.113)
Image (generated by PyMOL):
PyMOL image
show in jmol