Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1342:A1340
Extra
PDB:
ATOM 1 O3' U A1341 -96.438 114.204 76.088 1.00 17.32 O
ATOM 2 P G A1342 -95.078 113.673 75.414 1.00 52.72 P
ATOM 3 OP1 G A1342 -93.960 114.335 76.138 1.00 84.45 O
ATOM 4 OP2 G A1342 -95.181 113.824 73.935 1.00 86.33 O
ATOM 5 O5' G A1342 -95.067 112.112 75.754 1.00 20.39 O
ATOM 6 C5' G A1342 -94.064 111.547 76.632 1.00 20.26 C
ATOM 7 C4' G A1342 -93.711 110.139 76.206 1.00 20.45 C
ATOM 8 O4' G A1342 -94.842 109.275 76.433 1.00 21.30 O
ATOM 9 C3' G A1342 -93.343 109.938 74.744 1.00 19.75 C
ATOM 10 O3' G A1342 -91.962 110.163 74.554 1.00 17.91 O
ATOM 11 C2' G A1342 -93.653 108.472 74.527 1.00 21.22 C
ATOM 12 O2' G A1342 -92.599 107.659 74.997 1.00 22.20 O
ATOM 13 C1' G A1342 -94.863 108.268 75.440 1.00 22.88 C
ATOM 14 N9 G A1342 -96.154 108.304 74.754 1.00 51.52 N
ATOM 15 C8 G A1342 -97.153 109.234 74.907 1.00 52.27 C
ATOM 16 N7 G A1342 -98.201 108.985 74.172 1.00 52.65 N
ATOM 17 C5 G A1342 -97.873 107.827 73.486 1.00 53.52 C
ATOM 18 C6 G A1342 -98.611 107.089 72.546 1.00 53.40 C
ATOM 19 O6 G A1342 -99.742 107.316 72.107 1.00 52.21 O
ATOM 20 N1 G A1342 -97.909 105.981 72.107 1.00 54.52 N
ATOM 21 C2 G A1342 -96.656 105.629 72.524 1.00 55.40 C
ATOM 22 N2 G A1342 -96.159 104.512 72.005 1.00 56.83 N
ATOM 23 N3 G A1342 -95.948 106.313 73.389 1.00 55.11 N
ATOM 24 C4 G A1342 -96.614 107.393 73.832 1.00 53.26 C
ATOM 25 P C A1343 -91.441 110.780 73.169 1.00 54.44 P
ATOM 26 OP1 C A1343 -89.994 111.076 73.315 1.00 88.07 O
ATOM 27 OP2 C A1343 -92.380 111.862 72.755 1.00 86.67 O
ATOM 28 O5' C A1343 -91.588 109.580 72.137 1.00 23.23 O
TER
ATOM 1 O3' C B1339 -100.738 107.707 81.727 1.00 37.29 O
ATOM 2 P A B1340 -99.739 107.511 80.493 1.00 34.38 P
ATOM 3 OP1 A B1340 -99.758 106.059 80.161 1.00 45.73 O
ATOM 4 OP2 A B1340 -98.446 108.176 80.810 1.00 46.06 O
ATOM 5 O5' A B1340 -100.428 108.323 79.310 1.00 91.19 O
ATOM 6 C5' A B1340 -100.052 109.683 79.051 1.00 92.89 C
ATOM 7 C4' A B1340 -100.362 110.051 77.623 1.00 94.37 C
ATOM 8 O4' A B1340 -99.642 109.159 76.737 1.00 95.77 O
ATOM 9 C3' A B1340 -101.830 109.979 77.223 1.00 94.79 C
ATOM 10 O3' A B1340 -102.092 111.047 76.305 1.00 92.06 O
ATOM 11 C2' A B1340 -101.931 108.621 76.526 1.00 96.08 C
ATOM 12 O2' A B1340 -102.953 108.585 75.548 1.00 96.79 O
ATOM 13 C1' A B1340 -100.546 108.489 75.885 1.00 97.05 C
ATOM 14 N9 A B1340 -100.049 107.120 75.700 1.00 73.39 N
ATOM 15 C8 A B1340 -98.895 106.588 76.229 1.00 74.21 C
ATOM 16 N7 A B1340 -98.668 105.350 75.870 1.00 75.72 N
ATOM 17 C5 A B1340 -99.749 105.035 75.059 1.00 75.53 C
ATOM 18 C6 A B1340 -100.098 103.864 74.366 1.00 75.56 C
ATOM 19 N6 A B1340 -99.361 102.749 74.380 1.00 74.27 N
ATOM 20 N1 A B1340 -101.241 103.875 73.650 1.00 76.12 N
ATOM 21 C2 A B1340 -101.974 104.992 73.637 1.00 76.01 C
ATOM 22 N3 A B1340 -101.754 106.154 74.245 1.00 75.83 N
ATOM 23 C4 A B1340 -100.612 106.112 74.950 1.00 74.65 C
ATOM 24 P U B1341 -102.418 112.530 76.860 1.00 39.71 P
ATOM 25 OP1 U B1341 -102.494 112.512 78.348 1.00 80.54 O
ATOM 26 OP2 U B1341 -103.590 112.998 76.073 1.00 82.07 O
ATOM 27 O5' U B1341 -101.163 113.415 76.414 1.00 20.71 O
TER
ATOM 2 P G A1342 -95.078 113.673 75.414 1.00 52.72 P
ATOM 3 OP1 G A1342 -93.960 114.335 76.138 1.00 84.45 O
ATOM 4 OP2 G A1342 -95.181 113.824 73.935 1.00 86.33 O
ATOM 5 O5' G A1342 -95.067 112.112 75.754 1.00 20.39 O
ATOM 6 C5' G A1342 -94.064 111.547 76.632 1.00 20.26 C
ATOM 7 C4' G A1342 -93.711 110.139 76.206 1.00 20.45 C
ATOM 8 O4' G A1342 -94.842 109.275 76.433 1.00 21.30 O
ATOM 9 C3' G A1342 -93.343 109.938 74.744 1.00 19.75 C
ATOM 10 O3' G A1342 -91.962 110.163 74.554 1.00 17.91 O
ATOM 11 C2' G A1342 -93.653 108.472 74.527 1.00 21.22 C
ATOM 12 O2' G A1342 -92.599 107.659 74.997 1.00 22.20 O
ATOM 13 C1' G A1342 -94.863 108.268 75.440 1.00 22.88 C
ATOM 14 N9 G A1342 -96.154 108.304 74.754 1.00 51.52 N
ATOM 15 C8 G A1342 -97.153 109.234 74.907 1.00 52.27 C
ATOM 16 N7 G A1342 -98.201 108.985 74.172 1.00 52.65 N
ATOM 17 C5 G A1342 -97.873 107.827 73.486 1.00 53.52 C
ATOM 18 C6 G A1342 -98.611 107.089 72.546 1.00 53.40 C
ATOM 19 O6 G A1342 -99.742 107.316 72.107 1.00 52.21 O
ATOM 20 N1 G A1342 -97.909 105.981 72.107 1.00 54.52 N
ATOM 21 C2 G A1342 -96.656 105.629 72.524 1.00 55.40 C
ATOM 22 N2 G A1342 -96.159 104.512 72.005 1.00 56.83 N
ATOM 23 N3 G A1342 -95.948 106.313 73.389 1.00 55.11 N
ATOM 24 C4 G A1342 -96.614 107.393 73.832 1.00 53.26 C
ATOM 25 P C A1343 -91.441 110.780 73.169 1.00 54.44 P
ATOM 26 OP1 C A1343 -89.994 111.076 73.315 1.00 88.07 O
ATOM 27 OP2 C A1343 -92.380 111.862 72.755 1.00 86.67 O
ATOM 28 O5' C A1343 -91.588 109.580 72.137 1.00 23.23 O
TER
ATOM 1 O3' C B1339 -100.738 107.707 81.727 1.00 37.29 O
ATOM 2 P A B1340 -99.739 107.511 80.493 1.00 34.38 P
ATOM 3 OP1 A B1340 -99.758 106.059 80.161 1.00 45.73 O
ATOM 4 OP2 A B1340 -98.446 108.176 80.810 1.00 46.06 O
ATOM 5 O5' A B1340 -100.428 108.323 79.310 1.00 91.19 O
ATOM 6 C5' A B1340 -100.052 109.683 79.051 1.00 92.89 C
ATOM 7 C4' A B1340 -100.362 110.051 77.623 1.00 94.37 C
ATOM 8 O4' A B1340 -99.642 109.159 76.737 1.00 95.77 O
ATOM 9 C3' A B1340 -101.830 109.979 77.223 1.00 94.79 C
ATOM 10 O3' A B1340 -102.092 111.047 76.305 1.00 92.06 O
ATOM 11 C2' A B1340 -101.931 108.621 76.526 1.00 96.08 C
ATOM 12 O2' A B1340 -102.953 108.585 75.548 1.00 96.79 O
ATOM 13 C1' A B1340 -100.546 108.489 75.885 1.00 97.05 C
ATOM 14 N9 A B1340 -100.049 107.120 75.700 1.00 73.39 N
ATOM 15 C8 A B1340 -98.895 106.588 76.229 1.00 74.21 C
ATOM 16 N7 A B1340 -98.668 105.350 75.870 1.00 75.72 N
ATOM 17 C5 A B1340 -99.749 105.035 75.059 1.00 75.53 C
ATOM 18 C6 A B1340 -100.098 103.864 74.366 1.00 75.56 C
ATOM 19 N6 A B1340 -99.361 102.749 74.380 1.00 74.27 N
ATOM 20 N1 A B1340 -101.241 103.875 73.650 1.00 76.12 N
ATOM 21 C2 A B1340 -101.974 104.992 73.637 1.00 76.01 C
ATOM 22 N3 A B1340 -101.754 106.154 74.245 1.00 75.83 N
ATOM 23 C4 A B1340 -100.612 106.112 74.950 1.00 74.65 C
ATOM 24 P U B1341 -102.418 112.530 76.860 1.00 39.71 P
ATOM 25 OP1 U B1341 -102.494 112.512 78.348 1.00 80.54 O
ATOM 26 OP2 U B1341 -103.590 112.998 76.073 1.00 82.07 O
ATOM 27 O5' U B1341 -101.163 113.415 76.414 1.00 20.71 O
TER
Atoms:
OP1: (-93.960,114.335,76.138)
OP2: (-95.181,113.824,73.935)
C3': (-93.343,109.938,74.744)
C1': (-94.863,108.268,75.440)
C5': (-94.064,111.547,76.632)
O6: (-99.742,107.316,72.107)
O4': (-94.842,109.275,76.433)
C8: (-97.153,109.234,74.907)
C2: (-96.656,105.629,72.524)
C6: (-98.611,107.089,72.546)
C5: (-97.873,107.827,73.486)
C4: (-96.614,107.393,73.832)
P: (-95.078,113.673,75.414)
C4': (-93.711,110.139,76.206)
C2': (-93.653,108.472,74.527)
O2': (-92.599,107.659,74.997)
N1: (-97.909,105.981,72.107)
N2: (-96.159,104.512,72.005)
N3: (-95.948,106.313,73.389)
N7: (-98.201,108.985,74.172)
N9: (-96.154,108.304,74.754)
O5': (-95.067,112.112,75.754)
O3': (-91.962,110.163,74.554)
OP2: (-95.181,113.824,73.935)
C3': (-93.343,109.938,74.744)
C1': (-94.863,108.268,75.440)
C5': (-94.064,111.547,76.632)
O6: (-99.742,107.316,72.107)
O4': (-94.842,109.275,76.433)
C8: (-97.153,109.234,74.907)
C2: (-96.656,105.629,72.524)
C6: (-98.611,107.089,72.546)
C5: (-97.873,107.827,73.486)
C4: (-96.614,107.393,73.832)
P: (-95.078,113.673,75.414)
C4': (-93.711,110.139,76.206)
C2': (-93.653,108.472,74.527)
O2': (-92.599,107.659,74.997)
N1: (-97.909,105.981,72.107)
N2: (-96.159,104.512,72.005)
N3: (-95.948,106.313,73.389)
N7: (-98.201,108.985,74.172)
N9: (-96.154,108.304,74.754)
O5': (-95.067,112.112,75.754)
O3': (-91.962,110.163,74.554)
OP1: (-99.758,106.059,80.161)
OP2: (-98.446,108.176,80.810)
C3': (-101.830,109.979,77.223)
C1': (-100.546,108.489,75.885)
C5': (-100.052,109.683,79.051)
O4': (-99.642,109.159,76.737)
C8: (-98.895,106.588,76.229)
O2': (-102.953,108.585,75.548)
C6: (-100.098,103.864,74.366)
C5: (-99.749,105.035,75.059)
C4: (-100.612,106.112,74.950)
P: (-99.739,107.511,80.493)
C4': (-100.362,110.051,77.623)
C2': (-101.931,108.621,76.526)
C2: (-101.974,104.992,73.637)
N1: (-101.241,103.875,73.650)
N3: (-101.754,106.154,74.245)
N6: (-99.361,102.749,74.380)
N7: (-98.668,105.350,75.870)
N9: (-100.049,107.120,75.700)
O5': (-100.428,108.323,79.310)
O3': (-102.092,111.047,76.305)
OP2: (-98.446,108.176,80.810)
C3': (-101.830,109.979,77.223)
C1': (-100.546,108.489,75.885)
C5': (-100.052,109.683,79.051)
O4': (-99.642,109.159,76.737)
C8: (-98.895,106.588,76.229)
O2': (-102.953,108.585,75.548)
C6: (-100.098,103.864,74.366)
C5: (-99.749,105.035,75.059)
C4: (-100.612,106.112,74.950)
P: (-99.739,107.511,80.493)
C4': (-100.362,110.051,77.623)
C2': (-101.931,108.621,76.526)
C2: (-101.974,104.992,73.637)
N1: (-101.241,103.875,73.650)
N3: (-101.754,106.154,74.245)
N6: (-99.361,102.749,74.380)
N7: (-98.668,105.350,75.870)
N9: (-100.049,107.120,75.700)
O5': (-100.428,108.323,79.310)
O3': (-102.092,111.047,76.305)
Image (generated by PyMOL):