ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A483:A513

Extra

PDB:
ATOM 1 O3' C A 482 171.606 102.393 17.061 1.00 54.91 O
ATOM 2 P G A 483 172.702 101.640 16.170 1.00 53.49 P
ATOM 3 OP1 G A 483 171.977 100.632 15.339 1.00 45.73 O
ATOM 4 OP2 G A 483 173.801 101.195 17.071 1.00 45.73 O
ATOM 5 O5' G A 483 173.261 102.787 15.222 1.00 53.49 O
ATOM 6 C5' G A 483 174.011 103.874 15.753 1.00 53.49 C
ATOM 7 C4' G A 483 174.463 104.779 14.635 1.00 53.49 C
ATOM 8 O4' G A 483 175.453 104.103 13.816 1.00 53.49 O
ATOM 9 C3' G A 483 173.361 105.185 13.681 1.00 53.49 C
ATOM 10 O3' G A 483 172.681 106.335 14.147 1.00 53.49 O
ATOM 11 C2' G A 483 174.122 105.430 12.390 1.00 53.49 C
ATOM 12 O2' G A 483 174.785 106.679 12.421 1.00 53.49 O
ATOM 13 C1' G A 483 175.168 104.316 12.443 1.00 53.49 C
ATOM 14 N9 G A 483 174.689 103.042 11.898 1.00 45.73 N
ATOM 15 C8 G A 483 174.514 101.879 12.616 1.00 45.73 C
ATOM 16 N7 G A 483 174.077 100.890 11.893 1.00 45.73 N
ATOM 17 C5 G A 483 173.957 101.422 10.615 1.00 45.73 C
ATOM 18 C6 G A 483 173.542 100.811 9.419 1.00 45.73 C
ATOM 19 O6 G A 483 173.182 99.646 9.248 1.00 45.73 O
ATOM 20 N1 G A 483 173.570 101.697 8.352 1.00 45.73 N
ATOM 21 C2 G A 483 173.939 103.002 8.436 1.00 45.73 C
ATOM 22 N2 G A 483 173.879 103.689 7.307 1.00 45.73 N
ATOM 23 N3 G A 483 174.333 103.593 9.550 1.00 45.73 N
ATOM 24 C4 G A 483 174.323 102.748 10.596 1.00 45.73 C
ATOM 25 P G A 484 171.091 106.448 13.944 1.00 51.01 P
ATOM 26 OP1 G A 484 170.613 107.628 14.718 1.00 44.00 O
ATOM 27 OP2 G A 484 170.544 105.103 14.240 1.00 44.00 O
ATOM 28 O5' G A 484 170.903 106.751 12.389 1.00 51.01 O
TER

ATOM 1 O3' U B 512 178.526 101.729 18.983 1.00 81.48 O
ATOM 2 P A B 513 179.032 100.648 17.908 1.00 48.40 P
ATOM 3 OP1 A B 513 178.949 99.325 18.605 1.00 44.63 O
ATOM 4 OP2 A B 513 180.306 101.084 17.296 1.00 44.63 O
ATOM 5 O5' A B 513 177.956 100.685 16.739 1.00 48.40 O
ATOM 6 C5' A B 513 176.738 99.932 16.839 1.00 48.40 C
ATOM 7 C4' A B 513 176.556 99.051 15.622 1.00 48.40 C
ATOM 8 O4' A B 513 176.385 99.857 14.431 1.00 48.40 O
ATOM 9 C3' A B 513 177.647 98.040 15.308 1.00 48.40 C
ATOM 10 O3' A B 513 176.985 96.854 14.908 1.00 48.40 O
ATOM 11 C2' A B 513 178.363 98.664 14.111 1.00 48.40 C
ATOM 12 O2' A B 513 178.922 97.721 13.215 1.00 48.40 O
ATOM 13 C1' A B 513 177.210 99.362 13.413 1.00 48.40 C
ATOM 14 N9 A B 513 177.552 100.464 12.525 1.00 44.63 N
ATOM 15 C8 A B 513 178.144 101.655 12.822 1.00 44.63 C
ATOM 16 N7 A B 513 178.235 102.469 11.798 1.00 44.63 N
ATOM 17 C5 A B 513 177.683 101.751 10.754 1.00 44.63 C
ATOM 18 C6 A B 513 177.468 102.061 9.413 1.00 44.63 C
ATOM 19 N6 A B 513 177.792 103.234 8.860 1.00 44.63 N
ATOM 20 N1 A B 513 176.894 101.120 8.640 1.00 44.63 N
ATOM 21 C2 A B 513 176.553 99.956 9.190 1.00 44.63 C
ATOM 22 N3 A B 513 176.691 99.551 10.440 1.00 44.63 N
ATOM 23 C4 A B 513 177.274 100.508 11.182 1.00 44.63 C
ATOM 24 P C B 514 176.554 95.766 16.011 1.00 46.85 P
ATOM 25 OP1 C B 514 175.279 95.159 15.543 1.00 58.77 O
ATOM 26 OP2 C B 514 176.627 96.362 17.379 1.00 58.77 O
ATOM 27 O5' C B 514 177.688 94.655 15.937 1.00 46.85 O
TER

Atoms:
OP1: (171.977,100.632,15.339)
OP2: (173.801,101.195,17.071)
C3': (173.361,105.185,13.681)
C1': (175.168,104.316,12.443)
C5': (174.011,103.874,15.753)
O6: (173.182,99.646,9.248)
O4': (175.453,104.103,13.816)
C8: (174.514,101.879,12.616)
C2: (173.939,103.002,8.436)
C6: (173.542,100.811,9.419)
C5: (173.957,101.422,10.615)
C4: (174.323,102.748,10.596)
P: (172.702,101.640,16.170)
C4': (174.463,104.779,14.635)
C2': (174.122,105.430,12.390)
O2': (174.785,106.679,12.421)
N1: (173.570,101.697,8.352)
N2: (173.879,103.689,7.307)
N3: (174.333,103.593,9.550)
N7: (174.077,100.890,11.893)
N9: (174.689,103.042,11.898)
O5': (173.261,102.787,15.222)
O3': (172.681,106.335,14.147)
OP1: (178.949,99.325,18.605)
OP2: (180.306,101.084,17.296)
C3': (177.647,98.040,15.308)
C1': (177.210,99.362,13.413)
C5': (176.738,99.932,16.839)
O4': (176.385,99.857,14.431)
C8: (178.144,101.655,12.822)
O2': (178.922,97.721,13.215)
C6: (177.468,102.061,9.413)
C5: (177.683,101.751,10.754)
C4: (177.274,100.508,11.182)
P: (179.032,100.648,17.908)
C4': (176.556,99.051,15.622)
C2': (178.363,98.664,14.111)
C2: (176.553,99.956,9.190)
N1: (176.894,101.120,8.640)
N3: (176.691,99.551,10.440)
N6: (177.792,103.234,8.860)
N7: (178.235,102.469,11.798)
N9: (177.552,100.464,12.525)
O5': (177.956,100.685,16.739)
O3': (176.985,96.854,14.908)
Image (generated by PyMOL):
PyMOL image
show in jmol