Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:056:057
Extra
PDB:
ATOM 1 O3' C A 55 55.651 154.736 29.240 1.00 51.07 O
ATOM 2 P G A 56 57.185 154.499 28.815 1.00 52.66 P
ATOM 3 OP1 G A 56 57.222 154.462 27.330 1.00 53.34 O
ATOM 4 OP2 G A 56 57.715 153.347 29.583 1.00 52.93 O
ATOM 5 O5' G A 56 57.973 155.799 29.316 1.00 52.96 O
ATOM 6 C5' G A 56 57.522 157.142 29.001 1.00 50.41 C
ATOM 7 C4' G A 56 58.468 158.179 29.600 1.00 48.67 C
ATOM 8 O4' G A 56 58.473 158.087 31.053 1.00 48.44 O
ATOM 9 C3' G A 56 59.930 158.077 29.185 1.00 48.28 C
ATOM 10 O3' G A 56 60.515 159.380 29.250 1.00 49.30 O
ATOM 11 C2' G A 56 60.519 157.210 30.292 1.00 46.86 C
ATOM 12 O2' G A 56 61.915 157.388 30.416 1.00 45.68 O
ATOM 13 C1' G A 56 59.771 157.751 31.510 1.00 47.58 C
ATOM 14 N9 G A 56 59.624 156.825 32.632 1.00 47.49 N
ATOM 15 C8 G A 56 58.791 155.734 32.696 1.00 47.16 C
ATOM 16 N7 G A 56 58.828 155.127 33.853 1.00 47.37 N
ATOM 17 C5 G A 56 59.750 155.854 34.596 1.00 47.57 C
ATOM 18 C6 G A 56 60.199 155.679 35.942 1.00 46.83 C
ATOM 19 O6 G A 56 59.849 154.823 36.769 1.00 44.89 O
ATOM 20 N1 G A 56 61.145 156.639 36.294 1.00 43.84 N
ATOM 21 C2 G A 56 61.599 157.636 35.467 1.00 44.66 C
ATOM 22 N2 G A 56 62.525 158.462 35.985 1.00 40.81 N
ATOM 23 N3 G A 56 61.182 157.814 34.219 1.00 45.12 N
ATOM 24 C4 G A 56 60.265 156.895 33.853 1.00 45.56 C
ATOM 25 P A A 57 60.353 160.402 28.017 1.00 48.56 P
ATOM 26 OP1 A A 57 59.439 159.774 27.017 1.00 48.86 O
ATOM 27 OP2 A A 57 61.703 160.845 27.605 1.00 44.91 O
ATOM 28 O5' A A 57 59.582 161.651 28.643 1.00 48.40 O
TER
ATOM 1 O3' G B 56 60.515 159.380 29.250 1.00 49.30 O
ATOM 2 P A B 57 60.353 160.402 28.017 1.00 48.56 P
ATOM 3 OP1 A B 57 59.439 159.774 27.017 1.00 48.86 O
ATOM 4 OP2 A B 57 61.703 160.845 27.605 1.00 44.91 O
ATOM 5 O5' A B 57 59.582 161.651 28.643 1.00 48.40 O
ATOM 6 C5' A B 57 60.023 162.248 29.876 1.00 49.49 C
ATOM 7 C4' A B 57 60.442 163.685 29.650 1.00 49.56 C
ATOM 8 O4' A B 57 60.883 164.236 30.924 1.00 50.09 O
ATOM 9 C3' A B 57 61.615 163.876 28.688 1.00 49.90 C
ATOM 10 O3' A B 57 61.531 165.159 28.059 1.00 47.71 O
ATOM 11 C2' A B 57 62.811 163.835 29.633 1.00 50.75 C
ATOM 12 O2' A B 57 63.957 164.478 29.123 1.00 54.31 O
ATOM 13 C1' A B 57 62.258 164.576 30.850 1.00 50.76 C
ATOM 14 N9 A B 57 62.893 164.179 32.107 1.00 53.18 N
ATOM 15 C8 A B 57 63.533 164.984 33.020 1.00 52.98 C
ATOM 16 N7 A B 57 64.003 164.335 34.058 1.00 53.08 N
ATOM 17 C5 A B 57 63.655 163.013 33.811 1.00 52.75 C
ATOM 18 C6 A B 57 63.877 161.822 34.528 1.00 52.98 C
ATOM 19 N6 A B 57 64.537 161.762 35.687 1.00 50.38 N
ATOM 20 N1 A B 57 63.393 160.675 34.004 1.00 53.88 N
ATOM 21 C2 A B 57 62.740 160.730 32.840 1.00 53.44 C
ATOM 22 N3 A B 57 62.474 161.781 32.072 1.00 52.91 N
ATOM 23 C4 A B 57 62.965 162.904 32.618 1.00 52.50 C
ATOM 24 P U B 58 61.420 165.271 26.453 1.00 47.68 P
ATOM 25 OP1 U B 58 62.350 164.303 25.829 1.00 43.89 O
ATOM 26 OP2 U B 58 61.533 166.714 26.116 1.00 47.34 O
ATOM 27 O5' U B 58 59.916 164.830 26.146 1.00 46.64 O
TER
ATOM 2 P G A 56 57.185 154.499 28.815 1.00 52.66 P
ATOM 3 OP1 G A 56 57.222 154.462 27.330 1.00 53.34 O
ATOM 4 OP2 G A 56 57.715 153.347 29.583 1.00 52.93 O
ATOM 5 O5' G A 56 57.973 155.799 29.316 1.00 52.96 O
ATOM 6 C5' G A 56 57.522 157.142 29.001 1.00 50.41 C
ATOM 7 C4' G A 56 58.468 158.179 29.600 1.00 48.67 C
ATOM 8 O4' G A 56 58.473 158.087 31.053 1.00 48.44 O
ATOM 9 C3' G A 56 59.930 158.077 29.185 1.00 48.28 C
ATOM 10 O3' G A 56 60.515 159.380 29.250 1.00 49.30 O
ATOM 11 C2' G A 56 60.519 157.210 30.292 1.00 46.86 C
ATOM 12 O2' G A 56 61.915 157.388 30.416 1.00 45.68 O
ATOM 13 C1' G A 56 59.771 157.751 31.510 1.00 47.58 C
ATOM 14 N9 G A 56 59.624 156.825 32.632 1.00 47.49 N
ATOM 15 C8 G A 56 58.791 155.734 32.696 1.00 47.16 C
ATOM 16 N7 G A 56 58.828 155.127 33.853 1.00 47.37 N
ATOM 17 C5 G A 56 59.750 155.854 34.596 1.00 47.57 C
ATOM 18 C6 G A 56 60.199 155.679 35.942 1.00 46.83 C
ATOM 19 O6 G A 56 59.849 154.823 36.769 1.00 44.89 O
ATOM 20 N1 G A 56 61.145 156.639 36.294 1.00 43.84 N
ATOM 21 C2 G A 56 61.599 157.636 35.467 1.00 44.66 C
ATOM 22 N2 G A 56 62.525 158.462 35.985 1.00 40.81 N
ATOM 23 N3 G A 56 61.182 157.814 34.219 1.00 45.12 N
ATOM 24 C4 G A 56 60.265 156.895 33.853 1.00 45.56 C
ATOM 25 P A A 57 60.353 160.402 28.017 1.00 48.56 P
ATOM 26 OP1 A A 57 59.439 159.774 27.017 1.00 48.86 O
ATOM 27 OP2 A A 57 61.703 160.845 27.605 1.00 44.91 O
ATOM 28 O5' A A 57 59.582 161.651 28.643 1.00 48.40 O
TER
ATOM 1 O3' G B 56 60.515 159.380 29.250 1.00 49.30 O
ATOM 2 P A B 57 60.353 160.402 28.017 1.00 48.56 P
ATOM 3 OP1 A B 57 59.439 159.774 27.017 1.00 48.86 O
ATOM 4 OP2 A B 57 61.703 160.845 27.605 1.00 44.91 O
ATOM 5 O5' A B 57 59.582 161.651 28.643 1.00 48.40 O
ATOM 6 C5' A B 57 60.023 162.248 29.876 1.00 49.49 C
ATOM 7 C4' A B 57 60.442 163.685 29.650 1.00 49.56 C
ATOM 8 O4' A B 57 60.883 164.236 30.924 1.00 50.09 O
ATOM 9 C3' A B 57 61.615 163.876 28.688 1.00 49.90 C
ATOM 10 O3' A B 57 61.531 165.159 28.059 1.00 47.71 O
ATOM 11 C2' A B 57 62.811 163.835 29.633 1.00 50.75 C
ATOM 12 O2' A B 57 63.957 164.478 29.123 1.00 54.31 O
ATOM 13 C1' A B 57 62.258 164.576 30.850 1.00 50.76 C
ATOM 14 N9 A B 57 62.893 164.179 32.107 1.00 53.18 N
ATOM 15 C8 A B 57 63.533 164.984 33.020 1.00 52.98 C
ATOM 16 N7 A B 57 64.003 164.335 34.058 1.00 53.08 N
ATOM 17 C5 A B 57 63.655 163.013 33.811 1.00 52.75 C
ATOM 18 C6 A B 57 63.877 161.822 34.528 1.00 52.98 C
ATOM 19 N6 A B 57 64.537 161.762 35.687 1.00 50.38 N
ATOM 20 N1 A B 57 63.393 160.675 34.004 1.00 53.88 N
ATOM 21 C2 A B 57 62.740 160.730 32.840 1.00 53.44 C
ATOM 22 N3 A B 57 62.474 161.781 32.072 1.00 52.91 N
ATOM 23 C4 A B 57 62.965 162.904 32.618 1.00 52.50 C
ATOM 24 P U B 58 61.420 165.271 26.453 1.00 47.68 P
ATOM 25 OP1 U B 58 62.350 164.303 25.829 1.00 43.89 O
ATOM 26 OP2 U B 58 61.533 166.714 26.116 1.00 47.34 O
ATOM 27 O5' U B 58 59.916 164.830 26.146 1.00 46.64 O
TER
Atoms:
OP1: (57.222,154.462,27.330)
OP2: (57.715,153.347,29.583)
C3': (59.930,158.077,29.185)
C1': (59.771,157.751,31.510)
C5': (57.522,157.142,29.001)
O6: (59.849,154.823,36.769)
O4': (58.473,158.087,31.053)
C8: (58.791,155.734,32.696)
C2: (61.599,157.636,35.467)
C6: (60.199,155.679,35.942)
C5: (59.750,155.854,34.596)
C4: (60.265,156.895,33.853)
P: (57.185,154.499,28.815)
C4': (58.468,158.179,29.600)
C2': (60.519,157.210,30.292)
O2': (61.915,157.388,30.416)
N1: (61.145,156.639,36.294)
N2: (62.525,158.462,35.985)
N3: (61.182,157.814,34.219)
N7: (58.828,155.127,33.853)
N9: (59.624,156.825,32.632)
O5': (57.973,155.799,29.316)
O3': (60.515,159.380,29.250)
OP2: (57.715,153.347,29.583)
C3': (59.930,158.077,29.185)
C1': (59.771,157.751,31.510)
C5': (57.522,157.142,29.001)
O6: (59.849,154.823,36.769)
O4': (58.473,158.087,31.053)
C8: (58.791,155.734,32.696)
C2: (61.599,157.636,35.467)
C6: (60.199,155.679,35.942)
C5: (59.750,155.854,34.596)
C4: (60.265,156.895,33.853)
P: (57.185,154.499,28.815)
C4': (58.468,158.179,29.600)
C2': (60.519,157.210,30.292)
O2': (61.915,157.388,30.416)
N1: (61.145,156.639,36.294)
N2: (62.525,158.462,35.985)
N3: (61.182,157.814,34.219)
N7: (58.828,155.127,33.853)
N9: (59.624,156.825,32.632)
O5': (57.973,155.799,29.316)
O3': (60.515,159.380,29.250)
OP1: (59.439,159.774,27.017)
OP2: (61.703,160.845,27.605)
C3': (61.615,163.876,28.688)
C1': (62.258,164.576,30.850)
C5': (60.023,162.248,29.876)
O4': (60.883,164.236,30.924)
C8: (63.533,164.984,33.020)
O2': (63.957,164.478,29.123)
C6: (63.877,161.822,34.528)
C5: (63.655,163.013,33.811)
C4: (62.965,162.904,32.618)
P: (60.353,160.402,28.017)
C4': (60.442,163.685,29.650)
C2': (62.811,163.835,29.633)
C2: (62.740,160.730,32.840)
N1: (63.393,160.675,34.004)
N3: (62.474,161.781,32.072)
N6: (64.537,161.762,35.687)
N7: (64.003,164.335,34.058)
N9: (62.893,164.179,32.107)
O5': (59.582,161.651,28.643)
O3': (61.531,165.159,28.059)
OP2: (61.703,160.845,27.605)
C3': (61.615,163.876,28.688)
C1': (62.258,164.576,30.850)
C5': (60.023,162.248,29.876)
O4': (60.883,164.236,30.924)
C8: (63.533,164.984,33.020)
O2': (63.957,164.478,29.123)
C6: (63.877,161.822,34.528)
C5: (63.655,163.013,33.811)
C4: (62.965,162.904,32.618)
P: (60.353,160.402,28.017)
C4': (60.442,163.685,29.650)
C2': (62.811,163.835,29.633)
C2: (62.740,160.730,32.840)
N1: (63.393,160.675,34.004)
N3: (62.474,161.781,32.072)
N6: (64.537,161.762,35.687)
N7: (64.003,164.335,34.058)
N9: (62.893,164.179,32.107)
O5': (59.582,161.651,28.643)
O3': (61.531,165.159,28.059)
Image (generated by PyMOL):