Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A328:A476
Extra
PDB:
ATOM 1 O3' U A 327 -8.773 169.126 216.163 1.00 19.70 O
ATOM 2 P G A 328 -9.185 168.243 217.426 1.00 16.24 P
ATOM 3 OP1 G A 328 -10.028 169.114 218.297 1.00 16.24 O
ATOM 4 OP2 G A 328 -7.935 167.652 217.977 1.00 16.24 O
ATOM 5 O5' G A 328 -10.059 167.093 216.769 1.00 16.24 O
ATOM 6 C5' G A 328 -11.471 167.146 216.781 1.00 16.24 C
ATOM 7 C4' G A 328 -12.044 165.982 217.532 1.00 16.24 C
ATOM 8 O4' G A 328 -11.028 165.445 218.441 1.00 16.24 O
ATOM 9 C3' G A 328 -13.245 166.322 218.402 1.00 16.24 C
ATOM 10 O3' G A 328 -14.131 165.219 218.434 1.00 16.24 O
ATOM 11 C2' G A 328 -12.612 166.497 219.775 1.00 16.24 C
ATOM 12 O2' G A 328 -13.498 166.351 220.861 1.00 16.24 O
ATOM 13 C1' G A 328 -11.574 165.393 219.746 1.00 16.24 C
ATOM 14 N9 G A 328 -10.511 165.539 220.753 1.00 16.42 N
ATOM 15 C8 G A 328 -9.689 166.600 220.987 1.00 16.42 C
ATOM 16 N7 G A 328 -8.886 166.402 221.991 1.00 16.42 N
ATOM 17 C5 G A 328 -9.205 165.149 222.472 1.00 16.42 C
ATOM 18 C6 G A 328 -8.678 164.390 223.551 1.00 16.42 C
ATOM 19 O6 G A 328 -7.798 164.635 224.361 1.00 16.42 O
ATOM 20 N1 G A 328 -9.274 163.166 223.703 1.00 16.42 N
ATOM 21 C2 G A 328 -10.293 162.721 222.909 1.00 16.42 C
ATOM 22 N2 G A 328 -10.733 161.493 223.237 1.00 16.42 N
ATOM 23 N3 G A 328 -10.811 163.416 221.895 1.00 16.42 N
ATOM 24 C4 G A 328 -10.217 164.615 221.731 1.00 16.42 C
ATOM 25 P A A 329 -15.008 164.856 217.146 1.00 22.22 P
ATOM 26 OP1 A A 329 -14.845 163.382 216.900 1.00 22.22 O
ATOM 27 OP2 A A 329 -14.616 165.821 216.081 1.00 22.22 O
ATOM 28 O5' A A 329 -16.500 165.154 217.635 1.00 22.22 O
TER
ATOM 1 O3' G B 475 -13.129 157.995 215.874 1.00 1.23 O
ATOM 2 P A B 476 -13.688 159.471 215.565 1.00 7.20 P
ATOM 3 OP1 A B 476 -14.084 160.048 216.875 1.00 7.20 O
ATOM 4 OP2 A B 476 -14.704 159.352 214.485 1.00 7.20 O
ATOM 5 O5' A B 476 -12.435 160.264 215.010 1.00 7.20 O
ATOM 6 C5' A B 476 -12.535 161.668 214.731 1.00 7.20 C
ATOM 7 C4' A B 476 -11.420 162.457 215.386 1.00 7.20 C
ATOM 8 O4' A B 476 -11.635 162.540 216.818 1.00 7.20 O
ATOM 9 C3' A B 476 -10.042 161.847 215.253 1.00 7.20 C
ATOM 10 O3' A B 476 -9.437 162.133 214.019 1.00 7.20 O
ATOM 11 C2' A B 476 -9.295 162.389 216.458 1.00 7.20 C
ATOM 12 O2' A B 476 -8.839 163.696 216.221 1.00 7.20 O
ATOM 13 C1' A B 476 -10.400 162.460 217.497 1.00 7.20 C
ATOM 14 N9 A B 476 -10.427 161.277 218.357 1.00 7.60 N
ATOM 15 C8 A B 476 -11.391 160.285 218.327 1.00 7.60 C
ATOM 16 N7 A B 476 -11.205 159.353 219.249 1.00 7.60 N
ATOM 17 C5 A B 476 -10.056 159.777 219.909 1.00 7.60 C
ATOM 18 C6 A B 476 -9.366 159.210 220.958 1.00 7.60 C
ATOM 19 N6 A B 476 -9.804 158.069 221.459 1.00 7.60 N
ATOM 20 N1 A B 476 -8.262 159.832 221.429 1.00 7.60 N
ATOM 21 C2 A B 476 -7.884 160.970 220.843 1.00 7.60 C
ATOM 22 N3 A B 476 -8.454 161.627 219.832 1.00 7.60 N
ATOM 23 C4 A B 476 -9.555 160.965 219.395 1.00 7.60 C
ATOM 24 P A B 477 -8.490 161.046 213.364 1.00 6.52 P
ATOM 25 OP1 A B 477 -8.053 161.576 212.055 1.00 6.52 O
ATOM 26 OP2 A B 477 -9.207 159.762 213.400 1.00 6.52 O
ATOM 27 O5' A B 477 -7.272 161.023 214.392 1.00 6.52 O
TER
ATOM 2 P G A 328 -9.185 168.243 217.426 1.00 16.24 P
ATOM 3 OP1 G A 328 -10.028 169.114 218.297 1.00 16.24 O
ATOM 4 OP2 G A 328 -7.935 167.652 217.977 1.00 16.24 O
ATOM 5 O5' G A 328 -10.059 167.093 216.769 1.00 16.24 O
ATOM 6 C5' G A 328 -11.471 167.146 216.781 1.00 16.24 C
ATOM 7 C4' G A 328 -12.044 165.982 217.532 1.00 16.24 C
ATOM 8 O4' G A 328 -11.028 165.445 218.441 1.00 16.24 O
ATOM 9 C3' G A 328 -13.245 166.322 218.402 1.00 16.24 C
ATOM 10 O3' G A 328 -14.131 165.219 218.434 1.00 16.24 O
ATOM 11 C2' G A 328 -12.612 166.497 219.775 1.00 16.24 C
ATOM 12 O2' G A 328 -13.498 166.351 220.861 1.00 16.24 O
ATOM 13 C1' G A 328 -11.574 165.393 219.746 1.00 16.24 C
ATOM 14 N9 G A 328 -10.511 165.539 220.753 1.00 16.42 N
ATOM 15 C8 G A 328 -9.689 166.600 220.987 1.00 16.42 C
ATOM 16 N7 G A 328 -8.886 166.402 221.991 1.00 16.42 N
ATOM 17 C5 G A 328 -9.205 165.149 222.472 1.00 16.42 C
ATOM 18 C6 G A 328 -8.678 164.390 223.551 1.00 16.42 C
ATOM 19 O6 G A 328 -7.798 164.635 224.361 1.00 16.42 O
ATOM 20 N1 G A 328 -9.274 163.166 223.703 1.00 16.42 N
ATOM 21 C2 G A 328 -10.293 162.721 222.909 1.00 16.42 C
ATOM 22 N2 G A 328 -10.733 161.493 223.237 1.00 16.42 N
ATOM 23 N3 G A 328 -10.811 163.416 221.895 1.00 16.42 N
ATOM 24 C4 G A 328 -10.217 164.615 221.731 1.00 16.42 C
ATOM 25 P A A 329 -15.008 164.856 217.146 1.00 22.22 P
ATOM 26 OP1 A A 329 -14.845 163.382 216.900 1.00 22.22 O
ATOM 27 OP2 A A 329 -14.616 165.821 216.081 1.00 22.22 O
ATOM 28 O5' A A 329 -16.500 165.154 217.635 1.00 22.22 O
TER
ATOM 1 O3' G B 475 -13.129 157.995 215.874 1.00 1.23 O
ATOM 2 P A B 476 -13.688 159.471 215.565 1.00 7.20 P
ATOM 3 OP1 A B 476 -14.084 160.048 216.875 1.00 7.20 O
ATOM 4 OP2 A B 476 -14.704 159.352 214.485 1.00 7.20 O
ATOM 5 O5' A B 476 -12.435 160.264 215.010 1.00 7.20 O
ATOM 6 C5' A B 476 -12.535 161.668 214.731 1.00 7.20 C
ATOM 7 C4' A B 476 -11.420 162.457 215.386 1.00 7.20 C
ATOM 8 O4' A B 476 -11.635 162.540 216.818 1.00 7.20 O
ATOM 9 C3' A B 476 -10.042 161.847 215.253 1.00 7.20 C
ATOM 10 O3' A B 476 -9.437 162.133 214.019 1.00 7.20 O
ATOM 11 C2' A B 476 -9.295 162.389 216.458 1.00 7.20 C
ATOM 12 O2' A B 476 -8.839 163.696 216.221 1.00 7.20 O
ATOM 13 C1' A B 476 -10.400 162.460 217.497 1.00 7.20 C
ATOM 14 N9 A B 476 -10.427 161.277 218.357 1.00 7.60 N
ATOM 15 C8 A B 476 -11.391 160.285 218.327 1.00 7.60 C
ATOM 16 N7 A B 476 -11.205 159.353 219.249 1.00 7.60 N
ATOM 17 C5 A B 476 -10.056 159.777 219.909 1.00 7.60 C
ATOM 18 C6 A B 476 -9.366 159.210 220.958 1.00 7.60 C
ATOM 19 N6 A B 476 -9.804 158.069 221.459 1.00 7.60 N
ATOM 20 N1 A B 476 -8.262 159.832 221.429 1.00 7.60 N
ATOM 21 C2 A B 476 -7.884 160.970 220.843 1.00 7.60 C
ATOM 22 N3 A B 476 -8.454 161.627 219.832 1.00 7.60 N
ATOM 23 C4 A B 476 -9.555 160.965 219.395 1.00 7.60 C
ATOM 24 P A B 477 -8.490 161.046 213.364 1.00 6.52 P
ATOM 25 OP1 A B 477 -8.053 161.576 212.055 1.00 6.52 O
ATOM 26 OP2 A B 477 -9.207 159.762 213.400 1.00 6.52 O
ATOM 27 O5' A B 477 -7.272 161.023 214.392 1.00 6.52 O
TER
Atoms:
OP1: (-10.028,169.114,218.297)
OP2: (-7.935,167.652,217.977)
C3': (-13.245,166.322,218.402)
C1': (-11.574,165.393,219.746)
C5': (-11.471,167.146,216.781)
O6: (-7.798,164.635,224.361)
O4': (-11.028,165.445,218.441)
C8: (-9.689,166.600,220.987)
C2: (-10.293,162.721,222.909)
C6: (-8.678,164.390,223.551)
C5: (-9.205,165.149,222.472)
C4: (-10.217,164.615,221.731)
P: (-9.185,168.243,217.426)
C4': (-12.044,165.982,217.532)
C2': (-12.612,166.497,219.775)
O2': (-13.498,166.351,220.861)
N1: (-9.274,163.166,223.703)
N2: (-10.733,161.493,223.237)
N3: (-10.811,163.416,221.895)
N7: (-8.886,166.402,221.991)
N9: (-10.511,165.539,220.753)
O5': (-10.059,167.093,216.769)
O3': (-14.131,165.219,218.434)
OP2: (-7.935,167.652,217.977)
C3': (-13.245,166.322,218.402)
C1': (-11.574,165.393,219.746)
C5': (-11.471,167.146,216.781)
O6: (-7.798,164.635,224.361)
O4': (-11.028,165.445,218.441)
C8: (-9.689,166.600,220.987)
C2: (-10.293,162.721,222.909)
C6: (-8.678,164.390,223.551)
C5: (-9.205,165.149,222.472)
C4: (-10.217,164.615,221.731)
P: (-9.185,168.243,217.426)
C4': (-12.044,165.982,217.532)
C2': (-12.612,166.497,219.775)
O2': (-13.498,166.351,220.861)
N1: (-9.274,163.166,223.703)
N2: (-10.733,161.493,223.237)
N3: (-10.811,163.416,221.895)
N7: (-8.886,166.402,221.991)
N9: (-10.511,165.539,220.753)
O5': (-10.059,167.093,216.769)
O3': (-14.131,165.219,218.434)
OP1: (-14.084,160.048,216.875)
OP2: (-14.704,159.352,214.485)
C3': (-10.042,161.847,215.253)
C1': (-10.400,162.460,217.497)
C5': (-12.535,161.668,214.731)
O4': (-11.635,162.540,216.818)
C8: (-11.391,160.285,218.327)
O2': (-8.839,163.696,216.221)
C6: (-9.366,159.210,220.958)
C5: (-10.056,159.777,219.909)
C4: (-9.555,160.965,219.395)
P: (-13.688,159.471,215.565)
C4': (-11.420,162.457,215.386)
C2': (-9.295,162.389,216.458)
C2: (-7.884,160.970,220.843)
N1: (-8.262,159.832,221.429)
N3: (-8.454,161.627,219.832)
N6: (-9.804,158.069,221.459)
N7: (-11.205,159.353,219.249)
N9: (-10.427,161.277,218.357)
O5': (-12.435,160.264,215.010)
O3': (-9.437,162.133,214.019)
OP2: (-14.704,159.352,214.485)
C3': (-10.042,161.847,215.253)
C1': (-10.400,162.460,217.497)
C5': (-12.535,161.668,214.731)
O4': (-11.635,162.540,216.818)
C8: (-11.391,160.285,218.327)
O2': (-8.839,163.696,216.221)
C6: (-9.366,159.210,220.958)
C5: (-10.056,159.777,219.909)
C4: (-9.555,160.965,219.395)
P: (-13.688,159.471,215.565)
C4': (-11.420,162.457,215.386)
C2': (-9.295,162.389,216.458)
C2: (-7.884,160.970,220.843)
N1: (-8.262,159.832,221.429)
N3: (-8.454,161.627,219.832)
N6: (-9.804,158.069,221.459)
N7: (-11.205,159.353,219.249)
N9: (-10.427,161.277,218.357)
O5': (-12.435,160.264,215.010)
O3': (-9.437,162.133,214.019)
Image (generated by PyMOL):