Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:022:0448
Extra
PDB:
ATOM 1 O3' C A 21 38.741 139.389 43.998 1.00 40.08 O
ATOM 2 P G A 22 39.703 138.245 43.443 1.00 36.80 P
ATOM 3 OP1 G A 22 40.660 138.875 42.508 1.00 39.09 O
ATOM 4 OP2 G A 22 38.875 137.102 42.997 1.00 37.92 O
ATOM 5 O5' G A 22 40.509 137.771 44.718 1.00 36.97 O
ATOM 6 C5' G A 22 41.288 138.688 45.487 1.00 33.91 C
ATOM 7 C4' G A 22 41.846 137.974 46.681 1.00 33.93 C
ATOM 8 O4' G A 22 40.736 137.542 47.509 1.00 37.37 O
ATOM 9 C3' G A 22 42.596 136.690 46.358 1.00 32.44 C
ATOM 10 O3' G A 22 43.947 136.958 46.008 1.00 29.85 O
ATOM 11 C2' G A 22 42.456 135.914 47.657 1.00 34.82 C
ATOM 12 O2' G A 22 43.331 136.415 48.645 1.00 35.32 O
ATOM 13 C1' G A 22 41.017 136.263 48.056 1.00 37.94 C
ATOM 14 N9 G A 22 40.017 135.314 47.562 1.00 40.63 N
ATOM 15 C8 G A 22 39.235 135.426 46.435 1.00 40.40 C
ATOM 16 N7 G A 22 38.460 134.394 46.243 1.00 42.62 N
ATOM 17 C5 G A 22 38.740 133.551 47.311 1.00 45.06 C
ATOM 18 C6 G A 22 38.212 132.269 47.648 1.00 46.06 C
ATOM 19 O6 G A 22 37.368 131.592 47.046 1.00 45.33 O
ATOM 20 N1 G A 22 38.774 131.782 48.823 1.00 47.03 N
ATOM 21 C2 G A 22 39.716 132.429 49.579 1.00 45.54 C
ATOM 22 N2 G A 22 40.131 131.798 50.677 1.00 46.92 N
ATOM 23 N3 G A 22 40.215 133.611 49.279 1.00 46.87 N
ATOM 24 C4 G A 22 39.690 134.111 48.139 1.00 44.56 C
ATOM 25 P G A 23 44.877 135.779 45.444 1.00 32.36 P
ATOM 26 OP1 G A 23 46.230 136.317 45.194 1.00 28.97 O
ATOM 27 OP2 G A 23 44.153 135.071 44.351 1.00 30.52 O
ATOM 28 O5' G A 23 45.007 134.809 46.697 1.00 33.80 O
TER
ATOM 1 O3' A B 447 45.747 138.803 53.189 1.00 33.47 O
ATOM 2 P A B 448 44.300 138.123 53.065 1.00 33.70 P
ATOM 3 OP1 A B 448 43.631 138.238 54.379 1.00 32.53 O
ATOM 4 OP2 A B 448 44.424 136.793 52.417 1.00 34.13 O
ATOM 5 O5' A B 448 43.537 139.089 52.064 1.00 33.61 O
ATOM 6 C5' A B 448 43.957 139.203 50.699 1.00 33.18 C
ATOM 7 C4' A B 448 42.801 139.634 49.837 1.00 33.96 C
ATOM 8 O4' A B 448 41.815 138.571 49.762 1.00 34.84 O
ATOM 9 C3' A B 448 42.048 140.870 50.305 1.00 33.84 C
ATOM 10 O3' A B 448 41.599 141.552 49.149 1.00 34.49 O
ATOM 11 C2' A B 448 40.867 140.276 51.064 1.00 33.85 C
ATOM 12 O2' A B 448 39.739 141.119 51.089 1.00 33.52 O
ATOM 13 C1' A B 448 40.563 139.048 50.218 1.00 35.37 C
ATOM 14 N9 A B 448 39.912 137.962 50.943 1.00 38.00 N
ATOM 15 C8 A B 448 40.262 137.420 52.154 1.00 38.58 C
ATOM 16 N7 A B 448 39.521 136.404 52.509 1.00 40.24 N
ATOM 17 C5 A B 448 38.613 136.272 51.467 1.00 40.74 C
ATOM 18 C6 A B 448 37.571 135.360 51.230 1.00 40.55 C
ATOM 19 N6 A B 448 37.265 134.362 52.055 1.00 41.39 N
ATOM 20 N1 A B 448 36.853 135.506 50.098 1.00 40.28 N
ATOM 21 C2 A B 448 37.171 136.501 49.264 1.00 41.49 C
ATOM 22 N3 A B 448 38.133 137.416 49.371 1.00 41.60 N
ATOM 23 C4 A B 448 38.829 137.241 50.508 1.00 40.51 C
ATOM 24 P C B 449 42.455 142.776 48.576 1.00 35.06 P
ATOM 25 OP1 C B 449 41.687 143.350 47.435 1.00 34.16 O
ATOM 26 OP2 C B 449 43.847 142.308 48.365 1.00 32.93 O
ATOM 27 O5' C B 449 42.406 143.817 49.770 1.00 31.14 O
TER
ATOM 2 P G A 22 39.703 138.245 43.443 1.00 36.80 P
ATOM 3 OP1 G A 22 40.660 138.875 42.508 1.00 39.09 O
ATOM 4 OP2 G A 22 38.875 137.102 42.997 1.00 37.92 O
ATOM 5 O5' G A 22 40.509 137.771 44.718 1.00 36.97 O
ATOM 6 C5' G A 22 41.288 138.688 45.487 1.00 33.91 C
ATOM 7 C4' G A 22 41.846 137.974 46.681 1.00 33.93 C
ATOM 8 O4' G A 22 40.736 137.542 47.509 1.00 37.37 O
ATOM 9 C3' G A 22 42.596 136.690 46.358 1.00 32.44 C
ATOM 10 O3' G A 22 43.947 136.958 46.008 1.00 29.85 O
ATOM 11 C2' G A 22 42.456 135.914 47.657 1.00 34.82 C
ATOM 12 O2' G A 22 43.331 136.415 48.645 1.00 35.32 O
ATOM 13 C1' G A 22 41.017 136.263 48.056 1.00 37.94 C
ATOM 14 N9 G A 22 40.017 135.314 47.562 1.00 40.63 N
ATOM 15 C8 G A 22 39.235 135.426 46.435 1.00 40.40 C
ATOM 16 N7 G A 22 38.460 134.394 46.243 1.00 42.62 N
ATOM 17 C5 G A 22 38.740 133.551 47.311 1.00 45.06 C
ATOM 18 C6 G A 22 38.212 132.269 47.648 1.00 46.06 C
ATOM 19 O6 G A 22 37.368 131.592 47.046 1.00 45.33 O
ATOM 20 N1 G A 22 38.774 131.782 48.823 1.00 47.03 N
ATOM 21 C2 G A 22 39.716 132.429 49.579 1.00 45.54 C
ATOM 22 N2 G A 22 40.131 131.798 50.677 1.00 46.92 N
ATOM 23 N3 G A 22 40.215 133.611 49.279 1.00 46.87 N
ATOM 24 C4 G A 22 39.690 134.111 48.139 1.00 44.56 C
ATOM 25 P G A 23 44.877 135.779 45.444 1.00 32.36 P
ATOM 26 OP1 G A 23 46.230 136.317 45.194 1.00 28.97 O
ATOM 27 OP2 G A 23 44.153 135.071 44.351 1.00 30.52 O
ATOM 28 O5' G A 23 45.007 134.809 46.697 1.00 33.80 O
TER
ATOM 1 O3' A B 447 45.747 138.803 53.189 1.00 33.47 O
ATOM 2 P A B 448 44.300 138.123 53.065 1.00 33.70 P
ATOM 3 OP1 A B 448 43.631 138.238 54.379 1.00 32.53 O
ATOM 4 OP2 A B 448 44.424 136.793 52.417 1.00 34.13 O
ATOM 5 O5' A B 448 43.537 139.089 52.064 1.00 33.61 O
ATOM 6 C5' A B 448 43.957 139.203 50.699 1.00 33.18 C
ATOM 7 C4' A B 448 42.801 139.634 49.837 1.00 33.96 C
ATOM 8 O4' A B 448 41.815 138.571 49.762 1.00 34.84 O
ATOM 9 C3' A B 448 42.048 140.870 50.305 1.00 33.84 C
ATOM 10 O3' A B 448 41.599 141.552 49.149 1.00 34.49 O
ATOM 11 C2' A B 448 40.867 140.276 51.064 1.00 33.85 C
ATOM 12 O2' A B 448 39.739 141.119 51.089 1.00 33.52 O
ATOM 13 C1' A B 448 40.563 139.048 50.218 1.00 35.37 C
ATOM 14 N9 A B 448 39.912 137.962 50.943 1.00 38.00 N
ATOM 15 C8 A B 448 40.262 137.420 52.154 1.00 38.58 C
ATOM 16 N7 A B 448 39.521 136.404 52.509 1.00 40.24 N
ATOM 17 C5 A B 448 38.613 136.272 51.467 1.00 40.74 C
ATOM 18 C6 A B 448 37.571 135.360 51.230 1.00 40.55 C
ATOM 19 N6 A B 448 37.265 134.362 52.055 1.00 41.39 N
ATOM 20 N1 A B 448 36.853 135.506 50.098 1.00 40.28 N
ATOM 21 C2 A B 448 37.171 136.501 49.264 1.00 41.49 C
ATOM 22 N3 A B 448 38.133 137.416 49.371 1.00 41.60 N
ATOM 23 C4 A B 448 38.829 137.241 50.508 1.00 40.51 C
ATOM 24 P C B 449 42.455 142.776 48.576 1.00 35.06 P
ATOM 25 OP1 C B 449 41.687 143.350 47.435 1.00 34.16 O
ATOM 26 OP2 C B 449 43.847 142.308 48.365 1.00 32.93 O
ATOM 27 O5' C B 449 42.406 143.817 49.770 1.00 31.14 O
TER
Atoms:
OP1: (40.660,138.875,42.508)
OP2: (38.875,137.102,42.997)
C3': (42.596,136.690,46.358)
C1': (41.017,136.263,48.056)
C5': (41.288,138.688,45.487)
O6: (37.368,131.592,47.046)
O4': (40.736,137.542,47.509)
C8: (39.235,135.426,46.435)
C2: (39.716,132.429,49.579)
C6: (38.212,132.269,47.648)
C5: (38.740,133.551,47.311)
C4: (39.690,134.111,48.139)
P: (39.703,138.245,43.443)
C4': (41.846,137.974,46.681)
C2': (42.456,135.914,47.657)
O2': (43.331,136.415,48.645)
N1: (38.774,131.782,48.823)
N2: (40.131,131.798,50.677)
N3: (40.215,133.611,49.279)
N7: (38.460,134.394,46.243)
N9: (40.017,135.314,47.562)
O5': (40.509,137.771,44.718)
O3': (43.947,136.958,46.008)
OP2: (38.875,137.102,42.997)
C3': (42.596,136.690,46.358)
C1': (41.017,136.263,48.056)
C5': (41.288,138.688,45.487)
O6: (37.368,131.592,47.046)
O4': (40.736,137.542,47.509)
C8: (39.235,135.426,46.435)
C2: (39.716,132.429,49.579)
C6: (38.212,132.269,47.648)
C5: (38.740,133.551,47.311)
C4: (39.690,134.111,48.139)
P: (39.703,138.245,43.443)
C4': (41.846,137.974,46.681)
C2': (42.456,135.914,47.657)
O2': (43.331,136.415,48.645)
N1: (38.774,131.782,48.823)
N2: (40.131,131.798,50.677)
N3: (40.215,133.611,49.279)
N7: (38.460,134.394,46.243)
N9: (40.017,135.314,47.562)
O5': (40.509,137.771,44.718)
O3': (43.947,136.958,46.008)
OP1: (43.631,138.238,54.379)
OP2: (44.424,136.793,52.417)
C3': (42.048,140.870,50.305)
C1': (40.563,139.048,50.218)
C5': (43.957,139.203,50.699)
O4': (41.815,138.571,49.762)
C8: (40.262,137.420,52.154)
O2': (39.739,141.119,51.089)
C6: (37.571,135.360,51.230)
C5: (38.613,136.272,51.467)
C4: (38.829,137.241,50.508)
P: (44.300,138.123,53.065)
C4': (42.801,139.634,49.837)
C2': (40.867,140.276,51.064)
C2: (37.171,136.501,49.264)
N1: (36.853,135.506,50.098)
N3: (38.133,137.416,49.371)
N6: (37.265,134.362,52.055)
N7: (39.521,136.404,52.509)
N9: (39.912,137.962,50.943)
O5': (43.537,139.089,52.064)
O3': (41.599,141.552,49.149)
OP2: (44.424,136.793,52.417)
C3': (42.048,140.870,50.305)
C1': (40.563,139.048,50.218)
C5': (43.957,139.203,50.699)
O4': (41.815,138.571,49.762)
C8: (40.262,137.420,52.154)
O2': (39.739,141.119,51.089)
C6: (37.571,135.360,51.230)
C5: (38.613,136.272,51.467)
C4: (38.829,137.241,50.508)
P: (44.300,138.123,53.065)
C4': (42.801,139.634,49.837)
C2': (40.867,140.276,51.064)
C2: (37.171,136.501,49.264)
N1: (36.853,135.506,50.098)
N3: (38.133,137.416,49.371)
N6: (37.265,134.362,52.055)
N7: (39.521,136.404,52.509)
N9: (39.912,137.962,50.943)
O5': (43.537,139.089,52.064)
O3': (41.599,141.552,49.149)
Image (generated by PyMOL):