Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:034:035
Extra
PDB:
ATOM 1 O3' U A 33 64.116 139.487 24.984 1.00 37.44 O
ATOM 2 P G A 34 65.255 139.987 23.976 1.00 37.28 P
ATOM 3 OP1 G A 34 64.740 141.281 23.422 1.00 35.68 O
ATOM 4 OP2 G A 34 65.618 138.873 23.065 1.00 34.66 O
ATOM 5 O5' G A 34 66.525 140.259 24.900 1.00 37.25 O
ATOM 6 C5' G A 34 66.554 141.370 25.808 1.00 35.82 C
ATOM 7 C4' G A 34 67.905 141.471 26.466 1.00 37.21 C
ATOM 8 O4' G A 34 68.093 140.376 27.401 1.00 39.07 O
ATOM 9 C3' G A 34 69.111 141.353 25.556 1.00 37.50 C
ATOM 10 O3' G A 34 69.371 142.555 24.841 1.00 39.36 O
ATOM 11 C2' G A 34 70.206 141.027 26.559 1.00 36.59 C
ATOM 12 O2' G A 34 70.571 142.156 27.317 1.00 36.26 O
ATOM 13 C1' G A 34 69.477 140.053 27.484 1.00 37.26 C
ATOM 14 N9 G A 34 69.662 138.665 27.067 1.00 35.23 N
ATOM 15 C8 G A 34 68.769 137.887 26.370 1.00 35.20 C
ATOM 16 N7 G A 34 69.234 136.703 26.086 1.00 34.31 N
ATOM 17 C5 G A 34 70.507 136.690 26.636 1.00 31.35 C
ATOM 18 C6 G A 34 71.492 135.682 26.620 1.00 30.71 C
ATOM 19 O6 G A 34 71.442 134.566 26.085 1.00 32.44 O
ATOM 20 N1 G A 34 72.638 136.073 27.303 1.00 30.79 N
ATOM 21 C2 G A 34 72.811 137.283 27.918 1.00 32.97 C
ATOM 22 N2 G A 34 73.986 137.457 28.543 1.00 31.56 N
ATOM 23 N3 G A 34 71.899 138.248 27.923 1.00 32.34 N
ATOM 24 C4 G A 34 70.780 137.884 27.266 1.00 32.08 C
ATOM 25 P A A 35 70.060 142.487 23.384 1.00 39.17 P
ATOM 26 OP1 A A 35 69.009 142.801 22.392 1.00 38.80 O
ATOM 27 OP2 A A 35 70.846 141.234 23.238 1.00 38.09 O
ATOM 28 O5' A A 35 71.122 143.673 23.435 1.00 40.18 O
TER
ATOM 1 O3' G B 34 69.371 142.555 24.841 1.00 39.36 O
ATOM 2 P A B 35 70.060 142.487 23.384 1.00 39.17 P
ATOM 3 OP1 A B 35 69.009 142.801 22.392 1.00 38.80 O
ATOM 4 OP2 A B 35 70.846 141.234 23.238 1.00 38.09 O
ATOM 5 O5' A B 35 71.122 143.673 23.435 1.00 40.18 O
ATOM 6 C5' A B 35 72.070 143.753 24.509 1.00 39.58 C
ATOM 7 C4' A B 35 73.197 144.685 24.146 1.00 41.19 C
ATOM 8 O4' A B 35 74.088 144.808 25.285 1.00 41.82 O
ATOM 9 C3' A B 35 74.072 144.240 22.982 1.00 41.42 C
ATOM 10 O3' A B 35 74.599 145.410 22.367 1.00 45.42 O
ATOM 11 C2' A B 35 75.187 143.474 23.686 1.00 40.55 C
ATOM 12 O2' A B 35 76.398 143.426 22.957 1.00 39.90 O
ATOM 13 C1' A B 35 75.367 144.309 24.951 1.00 40.66 C
ATOM 14 N9 A B 35 75.878 143.575 26.110 1.00 42.09 N
ATOM 15 C8 A B 35 76.930 143.950 26.900 1.00 43.26 C
ATOM 16 N7 A B 35 77.149 143.145 27.906 1.00 45.21 N
ATOM 17 C5 A B 35 76.181 142.163 27.767 1.00 44.42 C
ATOM 18 C6 A B 35 75.871 141.028 28.535 1.00 44.63 C
ATOM 19 N6 A B 35 76.520 140.695 29.657 1.00 42.36 N
ATOM 20 N1 A B 35 74.853 140.245 28.117 1.00 44.43 N
ATOM 21 C2 A B 35 74.190 140.596 27.012 1.00 43.60 C
ATOM 22 N3 A B 35 74.377 141.645 26.216 1.00 45.48 N
ATOM 23 C4 A B 35 75.401 142.402 26.654 1.00 43.99 C
ATOM 24 P U B 36 74.368 145.674 20.801 1.00 44.03 P
ATOM 25 OP1 U B 36 74.393 144.369 20.097 1.00 44.48 O
ATOM 26 OP2 U B 36 75.332 146.731 20.426 1.00 43.98 O
ATOM 27 O5' U B 36 72.891 146.256 20.701 1.00 43.72 O
TER
ATOM 2 P G A 34 65.255 139.987 23.976 1.00 37.28 P
ATOM 3 OP1 G A 34 64.740 141.281 23.422 1.00 35.68 O
ATOM 4 OP2 G A 34 65.618 138.873 23.065 1.00 34.66 O
ATOM 5 O5' G A 34 66.525 140.259 24.900 1.00 37.25 O
ATOM 6 C5' G A 34 66.554 141.370 25.808 1.00 35.82 C
ATOM 7 C4' G A 34 67.905 141.471 26.466 1.00 37.21 C
ATOM 8 O4' G A 34 68.093 140.376 27.401 1.00 39.07 O
ATOM 9 C3' G A 34 69.111 141.353 25.556 1.00 37.50 C
ATOM 10 O3' G A 34 69.371 142.555 24.841 1.00 39.36 O
ATOM 11 C2' G A 34 70.206 141.027 26.559 1.00 36.59 C
ATOM 12 O2' G A 34 70.571 142.156 27.317 1.00 36.26 O
ATOM 13 C1' G A 34 69.477 140.053 27.484 1.00 37.26 C
ATOM 14 N9 G A 34 69.662 138.665 27.067 1.00 35.23 N
ATOM 15 C8 G A 34 68.769 137.887 26.370 1.00 35.20 C
ATOM 16 N7 G A 34 69.234 136.703 26.086 1.00 34.31 N
ATOM 17 C5 G A 34 70.507 136.690 26.636 1.00 31.35 C
ATOM 18 C6 G A 34 71.492 135.682 26.620 1.00 30.71 C
ATOM 19 O6 G A 34 71.442 134.566 26.085 1.00 32.44 O
ATOM 20 N1 G A 34 72.638 136.073 27.303 1.00 30.79 N
ATOM 21 C2 G A 34 72.811 137.283 27.918 1.00 32.97 C
ATOM 22 N2 G A 34 73.986 137.457 28.543 1.00 31.56 N
ATOM 23 N3 G A 34 71.899 138.248 27.923 1.00 32.34 N
ATOM 24 C4 G A 34 70.780 137.884 27.266 1.00 32.08 C
ATOM 25 P A A 35 70.060 142.487 23.384 1.00 39.17 P
ATOM 26 OP1 A A 35 69.009 142.801 22.392 1.00 38.80 O
ATOM 27 OP2 A A 35 70.846 141.234 23.238 1.00 38.09 O
ATOM 28 O5' A A 35 71.122 143.673 23.435 1.00 40.18 O
TER
ATOM 1 O3' G B 34 69.371 142.555 24.841 1.00 39.36 O
ATOM 2 P A B 35 70.060 142.487 23.384 1.00 39.17 P
ATOM 3 OP1 A B 35 69.009 142.801 22.392 1.00 38.80 O
ATOM 4 OP2 A B 35 70.846 141.234 23.238 1.00 38.09 O
ATOM 5 O5' A B 35 71.122 143.673 23.435 1.00 40.18 O
ATOM 6 C5' A B 35 72.070 143.753 24.509 1.00 39.58 C
ATOM 7 C4' A B 35 73.197 144.685 24.146 1.00 41.19 C
ATOM 8 O4' A B 35 74.088 144.808 25.285 1.00 41.82 O
ATOM 9 C3' A B 35 74.072 144.240 22.982 1.00 41.42 C
ATOM 10 O3' A B 35 74.599 145.410 22.367 1.00 45.42 O
ATOM 11 C2' A B 35 75.187 143.474 23.686 1.00 40.55 C
ATOM 12 O2' A B 35 76.398 143.426 22.957 1.00 39.90 O
ATOM 13 C1' A B 35 75.367 144.309 24.951 1.00 40.66 C
ATOM 14 N9 A B 35 75.878 143.575 26.110 1.00 42.09 N
ATOM 15 C8 A B 35 76.930 143.950 26.900 1.00 43.26 C
ATOM 16 N7 A B 35 77.149 143.145 27.906 1.00 45.21 N
ATOM 17 C5 A B 35 76.181 142.163 27.767 1.00 44.42 C
ATOM 18 C6 A B 35 75.871 141.028 28.535 1.00 44.63 C
ATOM 19 N6 A B 35 76.520 140.695 29.657 1.00 42.36 N
ATOM 20 N1 A B 35 74.853 140.245 28.117 1.00 44.43 N
ATOM 21 C2 A B 35 74.190 140.596 27.012 1.00 43.60 C
ATOM 22 N3 A B 35 74.377 141.645 26.216 1.00 45.48 N
ATOM 23 C4 A B 35 75.401 142.402 26.654 1.00 43.99 C
ATOM 24 P U B 36 74.368 145.674 20.801 1.00 44.03 P
ATOM 25 OP1 U B 36 74.393 144.369 20.097 1.00 44.48 O
ATOM 26 OP2 U B 36 75.332 146.731 20.426 1.00 43.98 O
ATOM 27 O5' U B 36 72.891 146.256 20.701 1.00 43.72 O
TER
Atoms:
OP1: (64.740,141.281,23.422)
OP2: (65.618,138.873,23.065)
C3': (69.111,141.353,25.556)
C1': (69.477,140.053,27.484)
C5': (66.554,141.370,25.808)
O6: (71.442,134.566,26.085)
O4': (68.093,140.376,27.401)
C8: (68.769,137.887,26.370)
C2: (72.811,137.283,27.918)
C6: (71.492,135.682,26.620)
C5: (70.507,136.690,26.636)
C4: (70.780,137.884,27.266)
P: (65.255,139.987,23.976)
C4': (67.905,141.471,26.466)
C2': (70.206,141.027,26.559)
O2': (70.571,142.156,27.317)
N1: (72.638,136.073,27.303)
N2: (73.986,137.457,28.543)
N3: (71.899,138.248,27.923)
N7: (69.234,136.703,26.086)
N9: (69.662,138.665,27.067)
O5': (66.525,140.259,24.900)
O3': (69.371,142.555,24.841)
OP2: (65.618,138.873,23.065)
C3': (69.111,141.353,25.556)
C1': (69.477,140.053,27.484)
C5': (66.554,141.370,25.808)
O6: (71.442,134.566,26.085)
O4': (68.093,140.376,27.401)
C8: (68.769,137.887,26.370)
C2: (72.811,137.283,27.918)
C6: (71.492,135.682,26.620)
C5: (70.507,136.690,26.636)
C4: (70.780,137.884,27.266)
P: (65.255,139.987,23.976)
C4': (67.905,141.471,26.466)
C2': (70.206,141.027,26.559)
O2': (70.571,142.156,27.317)
N1: (72.638,136.073,27.303)
N2: (73.986,137.457,28.543)
N3: (71.899,138.248,27.923)
N7: (69.234,136.703,26.086)
N9: (69.662,138.665,27.067)
O5': (66.525,140.259,24.900)
O3': (69.371,142.555,24.841)
OP1: (69.009,142.801,22.392)
OP2: (70.846,141.234,23.238)
C3': (74.072,144.240,22.982)
C1': (75.367,144.309,24.951)
C5': (72.070,143.753,24.509)
O4': (74.088,144.808,25.285)
C8: (76.930,143.950,26.900)
O2': (76.398,143.426,22.957)
C6: (75.871,141.028,28.535)
C5: (76.181,142.163,27.767)
C4: (75.401,142.402,26.654)
P: (70.060,142.487,23.384)
C4': (73.197,144.685,24.146)
C2': (75.187,143.474,23.686)
C2: (74.190,140.596,27.012)
N1: (74.853,140.245,28.117)
N3: (74.377,141.645,26.216)
N6: (76.520,140.695,29.657)
N7: (77.149,143.145,27.906)
N9: (75.878,143.575,26.110)
O5': (71.122,143.673,23.435)
O3': (74.599,145.410,22.367)
OP2: (70.846,141.234,23.238)
C3': (74.072,144.240,22.982)
C1': (75.367,144.309,24.951)
C5': (72.070,143.753,24.509)
O4': (74.088,144.808,25.285)
C8: (76.930,143.950,26.900)
O2': (76.398,143.426,22.957)
C6: (75.871,141.028,28.535)
C5: (76.181,142.163,27.767)
C4: (75.401,142.402,26.654)
P: (70.060,142.487,23.384)
C4': (73.197,144.685,24.146)
C2': (75.187,143.474,23.686)
C2: (74.190,140.596,27.012)
N1: (74.853,140.245,28.117)
N3: (74.377,141.645,26.216)
N6: (76.520,140.695,29.657)
N7: (77.149,143.145,27.906)
N9: (75.878,143.575,26.110)
O5': (71.122,143.673,23.435)
O3': (74.599,145.410,22.367)
Image (generated by PyMOL):